RNA–Protein interactions for RNA: ENST00000522250.5

FAM49B-220, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 1,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-220ENST00000522250 NKX3-2P78367 333 aa13.72□□□□□ -0.21
FAM49B-220ENST00000522250 CCDC96Q2M329 555 aa13.72□□□□□ -0.21
FAM49B-220ENST00000522250 ZNF697Q5TEC3 545 aa13.72□□□□□ -0.21
FAM49B-220ENST00000522250 TTBK2Q6IQ55 1244 aa13.72□□□□□ -0.21
FAM49B-220ENST00000522250 DCAF4Q8WV16 495 aa13.72□□□□□ -0.21
FAM49B-220ENST00000522250 GLT1D1Q96MS3 346 aa13.72□□□□□ -0.21
FAM49B-220ENST00000522250 PURBQ96QR8 312 aaKnown RBP13.72□□□□□ -0.21
FAM49B-220ENST00000522250 CYP39A1Q9NYL5 469 aa13.72□□□□□ -0.21
FAM49B-220ENST00000522250 LAMA4Q16363 1823 aa13.71□□□□□ -0.21
FAM49B-220ENST00000522250 CUL9Q8IWT3 2517 aa13.71□□□□□ -0.21
FAM49B-220ENST00000522250 SLC16A2P36021 539 aa13.71□□□□□ -0.22
FAM49B-220ENST00000522250 HAND2P61296 217 aa13.71□□□□□ -0.22
FAM49B-220ENST00000522250 SMAD3P84022 425 aaKnown RBP13.71□□□□□ -0.22
FAM49B-220ENST00000522250 FPGSQ05932 587 aa13.71□□□□□ -0.22
FAM49B-220ENST00000522250 RRP12Q5JTH9 1297 aaKnown RBP13.71□□□□□ -0.22
FAM49B-220ENST00000522250 GNASQ5JWF2 1037 aa13.71□□□□□ -0.22
FAM49B-220ENST00000522250 PCSK9Q8NBP7 692 aaKnown RBP13.71□□□□□ -0.22
FAM49B-220ENST00000522250 RNPC3Q96LT9 517 aaKnown RBP13.71□□□□□ -0.22
FAM49B-220ENST00000522250 TMEM47Q9BQJ4 181 aa13.71□□□□□ -0.22
FAM49B-220ENST00000522250 RANBP17Q9H2T7 1088 aaKnown RBP13.71□□□□□ -0.22
FAM49B-220ENST00000522250 TTYH1Q9H313 450 aaPredicted RBP13.71□□□□□ -0.22
FAM49B-220ENST00000522250 SPC25Q9HBM1 224 aa13.71□□□□□ -0.22
FAM49B-220ENST00000522250 TOMM22Q9NS69 142 aa13.71□□□□□ -0.22
FAM49B-220ENST00000522250 CCPG1Q9ULG6 757 aa13.71□□□□□ -0.22
FAM49B-220ENST00000522250 GNEQ9Y223 722 aaKnown RBP13.71□□□□□ -0.22
FAM49B-220ENST00000522250 CCDC171Q6TFL3 1326 aa13.7□□□□□ -0.22
FAM49B-220ENST00000522250 PRUNE2Q8WUY3 3088 aa13.7□□□□□ -0.22
FAM49B-220ENST00000522250 ICAM1P05362 532 aa13.7□□□□□ -0.22
FAM49B-220ENST00000522250 BEX3Q00994 111 aa13.7□□□□□ -0.22
FAM49B-220ENST00000522250 TNFAIP2Q03169 654 aa13.7□□□□□ -0.22
FAM49B-220ENST00000522250 BTNL9Q6UXG8 535 aa13.7□□□□□ -0.22
FAM49B-220ENST00000522250 TICAM2Q86XR7 235 aa13.7□□□□□ -0.22
FAM49B-220ENST00000522250 TBC1D10CQ8IV04 446 aa13.7□□□□□ -0.22
FAM49B-220ENST00000522250 SMC5Q8IY18 1101 aa13.7□□□□□ -0.22
FAM49B-220ENST00000522250 SEMA6BQ9H3T3 888 aa13.7□□□□□ -0.22
FAM49B-220ENST00000522250 TCP11L1Q9NUJ3 509 aa13.7□□□□□ -0.22
FAM49B-220ENST00000522250 FRMPD2Q68DX3 1309 aaPredicted RBP13.7□□□□□ -0.22
FAM49B-220ENST00000522250 A0A0U1RQG5 324 aaPredicted RBP13.69□□□□□ -0.22
FAM49B-220ENST00000522250 ASB14A6NK59 587 aa13.69□□□□□ -0.22
FAM49B-220ENST00000522250 ARVCFO00192 962 aa13.69□□□□□ -0.22
FAM49B-220ENST00000522250 TIMP1P01033 207 aa13.69□□□□□ -0.22
FAM49B-220ENST00000522250 TOP1P11387 765 aaKnown RBP13.69□□□□□ -0.22
FAM49B-220ENST00000522250 HOXD11P31277 338 aaPredicted RBP13.69□□□□□ -0.22
FAM49B-220ENST00000522250 TMEM63BQ5T3F8 832 aa13.69□□□□□ -0.22
FAM49B-220ENST00000522250 SYDE2Q5VT97 1194 aa13.69□□□□□ -0.22
FAM49B-220ENST00000522250 NSMFQ6X4W1 530 aa13.69□□□□□ -0.22
FAM49B-220ENST00000522250 TLK2Q86UE8 772 aa13.69□□□□□ -0.22
FAM49B-220ENST00000522250 FBXO16Q8IX29 292 aaPredicted RBP13.69□□□□□ -0.22
FAM49B-220ENST00000522250 FAM126BQ8IXS8 530 aa13.69□□□□□ -0.22
FAM49B-220ENST00000522250 CDX2Q99626 313 aaPredicted RBP13.69□□□□□ -0.22
FAM49B-220ENST00000522250 PDGFCQ9NRA1 345 aa13.69□□□□□ -0.22
FAM49B-220ENST00000522250 MROH7Q68CQ1 1323 aa13.69□□□□□ -0.22
FAM49B-220ENST00000522250 TRIM6-TRIM34B2RNG4 842 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 NFIBO00712 420 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 SMPD1P17405 629 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 B4GALNT3Q6L9W6 998 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 TAPT1Q6NXT6 567 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 NOL8Q76FK4 1167 aaKnown RBP13.68□□□□□ -0.22
FAM49B-220ENST00000522250 EEPD1Q7L9B9 569 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 MORC4Q8TE76 937 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 VTI1AQ96AJ9 217 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 GPCPD1Q9NPB8 672 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 IGHDP01880 384 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 PDHBP11177 359 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 FSCN1Q16658 493 aaKnown RBP13.68□□□□□ -0.22
FAM49B-220ENST00000522250 AKNAD1Q5T1N1 836 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 MFSD5Q6N075 450 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 CXCL17Q6UXB2 119 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 C16orf59Q7L2K0 433 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 RILPL2Q969X0 211 aa13.68□□□□□ -0.22
FAM49B-220ENST00000522250 NEDD4P46934 1319 aa13.67□□□□□ -0.22
FAM49B-220ENST00000522250 CD4P01730 458 aa13.67□□□□□ -0.22
FAM49B-220ENST00000522250 SDSP20132 328 aa13.67□□□□□ -0.22
FAM49B-220ENST00000522250 BAATQ14032 418 aaPredicted RBP13.67□□□□□ -0.22
FAM49B-220ENST00000522250 PLEKHM2Q8IWE5 1019 aa13.67□□□□□ -0.22
FAM49B-220ENST00000522250 SLC43A3Q8NBI5 491 aa13.67□□□□□ -0.22
FAM49B-220ENST00000522250 CLEC4DQ8WXI8 215 aa13.67□□□□□ -0.22
FAM49B-220ENST00000522250 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.67□□□□□ -0.223e-8■□□□□ 9.1
FAM49B-220ENST00000522250 GRIN2DO15399 1336 aa13.67□□□□□ -0.22
FAM49B-220ENST00000522250 CHD9Q3L8U1 2897 aa13.66□□□□□ -0.22
FAM49B-220ENST00000522250 DYNC1LI2O43237 492 aaPredicted RBP13.66□□□□□ -0.22
FAM49B-220ENST00000522250 SNHG28P0DPA3 235 aa13.66□□□□□ -0.22
FAM49B-220ENST00000522250 CSF2RAP15509 400 aa13.66□□□□□ -0.22
FAM49B-220ENST00000522250 ALDH5A1P51649 535 aaPredicted RBP13.66□□□□□ -0.22
FAM49B-220ENST00000522250 NUCB1Q02818 461 aa13.66□□□□□ -0.22
FAM49B-220ENST00000522250 ZNF543Q08ER8 600 aa13.66□□□□□ -0.22
FAM49B-220ENST00000522250 AAMPQ13685 434 aa13.66□□□□□ -0.22
FAM49B-220ENST00000522250 IQSEC1Q6DN90 963 aa13.66□□□□□ -0.22
FAM49B-220ENST00000522250 SLC30A10Q6XR72 485 aa13.66□□□□□ -0.22
FAM49B-220ENST00000522250 MFSD6Q6ZSS7 791 aa13.66□□□□□ -0.22
FAM49B-220ENST00000522250 CHD1LQ86WJ1 897 aa13.66□□□□□ -0.22
FAM49B-220ENST00000522250 MYLIPQ8WY64 445 aa13.66□□□□□ -0.22
FAM49B-220ENST00000522250 YTHDC1Q96MU7 727 aaKnown RBP13.66□□□□□ -0.22
FAM49B-220ENST00000522250 PPP1R12CQ9BZL4 782 aa13.66□□□□□ -0.22
FAM49B-220ENST00000522250 VTA1Q9NP79 307 aa13.66□□□□□ -0.22
FAM49B-220ENST00000522250 PCP11498 1178 aaKnown RBP13.65□□□□□ -0.22
FAM49B-220ENST00000522250 TMEM240Q5SV17 173 aa13.65□□□□□ -0.22
FAM49B-220ENST00000522250 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.65□□□□□ -0.22
FAM49B-220ENST00000522250 TTC14Q96N46 770 aa13.65□□□□□ -0.22
FAM49B-220ENST00000522250 ZKSCAN3Q9BRR0 538 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms