RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 EDNRBP24530 442 aa11.01□□□□□ -0.65
CLK4-209ENST00000521621 IKQ13123 557 aaPredicted RBP11.01□□□□□ -0.65
CLK4-209ENST00000521621 CDC37Q16543 378 aaPredicted RBP11.01□□□□□ -0.65
CLK4-209ENST00000521621 LHX8Q68G74 356 aa11.01□□□□□ -0.65
CLK4-209ENST00000521621 AMNQ9BXJ7 453 aa11.01□□□□□ -0.65
CLK4-209ENST00000521621 ADD3Q9UEY8 706 aaKnown RBP11.01□□□□□ -0.65
CLK4-209ENST00000521621 Q9Y3F1 56 aa11.01□□□□□ -0.65
CLK4-209ENST00000521621 FRMPD4Q14CM0 1322 aa11□□□□□ -0.65
CLK4-209ENST00000521621 B4DLN1 442 aa11□□□□□ -0.65
CLK4-209ENST00000521621 SEPT4O43236 478 aa11□□□□□ -0.65
CLK4-209ENST00000521621 HSD17B4P51659 736 aa11□□□□□ -0.65
CLK4-209ENST00000521621 MRPL12P52815 198 aaKnown RBP11□□□□□ -0.65
CLK4-209ENST00000521621 MTFR1Q15390 333 aa11□□□□□ -0.65
CLK4-209ENST00000521621 CCL14Q16627 93 aa11□□□□□ -0.65
CLK4-209ENST00000521621 CTCFLQ8NI51 663 aaPredicted RBP11□□□□□ -0.65
CLK4-209ENST00000521621 U2AF1L4Q8WU68 220 aaKnown RBP11□□□□□ -0.65
CLK4-209ENST00000521621 KATNBL1Q9H079 304 aa11□□□□□ -0.65
CLK4-209ENST00000521621 DDX20Q9UHI6 824 aaKnown RBP11□□□□□ -0.65
CLK4-209ENST00000521621 ZNF865P0CJ78 1059 aaPredicted RBP11□□□□□ -0.65
CLK4-209ENST00000521621 ADCK5Q3MIX3 580 aa11□□□□□ -0.65
CLK4-209ENST00000521621 RASGRP2Q7LDG7 609 aa11□□□□□ -0.65
CLK4-209ENST00000521621 FBXO11Q86XK2 927 aa11□□□□□ -0.65
CLK4-209ENST00000521621 ANKRD35Q8N283 1001 aa11□□□□□ -0.65
CLK4-209ENST00000521621 MPHOSPH6Q99547 160 aaKnown RBP11□□□□□ -0.65
CLK4-209ENST00000521621 SLC12A7Q9Y666 1083 aa11□□□□□ -0.65
CLK4-209ENST00000521621 MYH6P13533 1939 aa11□□□□□ -0.65
CLK4-209ENST00000521621 POTEFA5A3E0 1075 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 SLC16A2P36021 539 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 SLC35G1Q2M3R5 365 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 QRICH1Q2TAL8 776 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 PPP1R18Q6NYC8 613 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 BLOC1S2Q6QNY1 142 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 RUFY3Q7L099 469 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 CPXCR1Q8N123 301 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 STAG2Q8N3U4 1231 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 FANCBQ8NB91 859 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 DDX11Q96FC9 970 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 IWS1Q96ST2 819 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 RNF208Q9H0X6 261 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 UPF3AQ9H1J1 476 aaKnown RBP10.99□□□□□ -0.65
CLK4-209ENST00000521621 ABHD16BQ9H3Z7 469 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 SENP2Q9HC62 589 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 RBM27Q9P2N5 1060 aaKnown RBP10.99□□□□□ -0.65
CLK4-209ENST00000521621 POTEB2H3BUK9 544 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 PIK3CDO00329 1044 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 COL6A1P12109 1028 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 CST5P28325 142 aaPredicted RBP10.99□□□□□ -0.65
CLK4-209ENST00000521621 MUM1L1Q5H9M0 696 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 APOA5Q6Q788 366 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 TMTC3Q6ZXV5 915 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 TRPV1Q8NER1 839 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 SEZ6LQ9BYH1 1024 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 VTA1Q9NP79 307 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 CCDC196A0A1B0GTZ2 297 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 SOWAHBA6NEL2 793 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 CYTH3O43739 400 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 SNAI1O95863 264 aaPredicted RBP10.99□□□□□ -0.65
CLK4-209ENST00000521621 ALAS1P13196 640 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 CCDC174Q6PII3 467 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 SYNE3Q6ZMZ3 975 aa10.99□□□□□ -0.65
CLK4-209ENST00000521621 TSEN34Q9BSV6 310 aaKnown RBP10.99□□□□□ -0.65
CLK4-209ENST00000521621 BIN2Q9UBW5 565 aaPredicted RBP10.99□□□□□ -0.65
CLK4-209ENST00000521621 MNX1P50219 401 aaPredicted RBP10.98□□□□□ -0.65
CLK4-209ENST00000521621 MLLT1Q03111 559 aaPredicted RBP10.98□□□□□ -0.65
CLK4-209ENST00000521621 FUT2Q10981 343 aa10.98□□□□□ -0.65
CLK4-209ENST00000521621 C1orf53Q5VUE5 145 aa10.98□□□□□ -0.65
CLK4-209ENST00000521621 ZNF274Q96GC6 653 aaPredicted RBP10.98□□□□□ -0.65
CLK4-209ENST00000521621 GOLGA8HP0CJ92 632 aa10.98□□□□□ -0.65
CLK4-209ENST00000521621 TRIM32Q13049 653 aa10.98□□□□□ -0.65
CLK4-209ENST00000521621 WDR78Q5VTH9 848 aa10.98□□□□□ -0.65
CLK4-209ENST00000521621 RNF207Q6ZRF8 634 aa10.98□□□□□ -0.65
CLK4-209ENST00000521621 RRP36Q96EU6 259 aaKnown RBP10.98□□□□□ -0.65
CLK4-209ENST00000521621 DNM1LO00429 736 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 AKR1A1P14550 325 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 CCND3P30281 292 aaPredicted RBP10.97□□□□□ -0.65
CLK4-209ENST00000521621 XRRA1Q6P2D8 792 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 JAKMIP1Q96N16 626 aaKnown RBP10.97□□□□□ -0.65
CLK4-209ENST00000521621 UBA5Q9GZZ9 404 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 GLT8D2Q9H1C3 349 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.97□□□□□ -0.65
CLK4-209ENST00000521621 FAM184BQ9ULE4 1060 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 ASTN1O14525 1302 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 PCNTO95613 3336 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 NKRFO15226 690 aaKnown RBP eCLIP10.97□□□□□ -0.65
CLK4-209ENST00000521621 ZBTB43O43298 467 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 PPP1R11O60927 126 aaPredicted RBP10.97□□□□□ -0.65
CLK4-209ENST00000521621 STAM2O75886 525 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 PGK2P07205 417 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 ALDH5A1P51649 535 aaPredicted RBP10.97□□□□□ -0.65
CLK4-209ENST00000521621 SOX10P56693 466 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 MCTP2Q6DN12 878 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 IQSEC1Q6DN90 963 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 NFXL1Q6ZNB6 911 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 ARRDC4Q8NCT1 418 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 BRPF3Q9ULD4 1205 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 CNPY2Q9Y2B0 182 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 CYP46A1Q9Y6A2 500 aa10.97□□□□□ -0.65
CLK4-209ENST00000521621 OPLAHO14841 1288 aa10.96□□□□□ -0.65
CLK4-209ENST00000521621 EN2P19622 333 aaPredicted RBP10.96□□□□□ -0.65
CLK4-209ENST00000521621 ARMCX2Q7L311 632 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms