RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 PCSK9Q8NBP7 692 aaKnown RBP24■■□□□ 1.43
PABPC1-217ENST00000521067 RNPC3Q96LT9 517 aaKnown RBP24■■□□□ 1.43
PABPC1-217ENST00000521067 SLC16A2P36021 539 aa23.99■■□□□ 1.43
PABPC1-217ENST00000521067 TNFAIP2Q03169 654 aa23.99■■□□□ 1.43
PABPC1-217ENST00000521067 C16orf59Q7L2K0 433 aa23.99■■□□□ 1.43
PABPC1-217ENST00000521067 ZNF589Q86UQ0 364 aaPredicted RBP23.99■■□□□ 1.43
PABPC1-217ENST00000521067 VTI1AQ96AJ9 217 aa23.99■■□□□ 1.43
PABPC1-217ENST00000521067 SPC25Q9HBM1 224 aa23.99■■□□□ 1.43
PABPC1-217ENST00000521067 PDGFCQ9NRA1 345 aa23.99■■□□□ 1.43
PABPC1-217ENST00000521067 CYP39A1Q9NYL5 469 aa23.99■■□□□ 1.43
PABPC1-217ENST00000521067 GNEQ9Y223 722 aaKnown RBP23.99■■□□□ 1.43
PABPC1-217ENST00000521067 ARVCFO00192 962 aa23.98■■□□□ 1.43
PABPC1-217ENST00000521067 MCMDC2Q4G0Z9 681 aa23.98■■□□□ 1.43
PABPC1-217ENST00000521067 TMEM47Q9BQJ4 181 aa23.98■■□□□ 1.43
PABPC1-217ENST00000521067 ZBTB47Q9UFB7 747 aaPredicted RBP23.98■■□□□ 1.43
PABPC1-217ENST00000521067 ASB14A6NK59 587 aa23.97■■□□□ 1.43
PABPC1-217ENST00000521067 HSPD1P10809 573 aaKnown RBP23.97■■□□□ 1.43
PABPC1-217ENST00000521067 SMPD1P17405 629 aa23.97■■□□□ 1.43
PABPC1-217ENST00000521067 NMIQ13287 307 aaPredicted RBP23.97■■□□□ 1.43
PABPC1-217ENST00000521067 TAPT1Q6NXT6 567 aa23.97■■□□□ 1.43
PABPC1-217ENST00000521067 DCAF4Q8WV16 495 aa23.97■■□□□ 1.43
PABPC1-217ENST00000521067 A0A0U1RQG5 324 aaPredicted RBP23.96■■□□□ 1.43
PABPC1-217ENST00000521067 CCDC96Q2M329 555 aa23.96■■□□□ 1.43
PABPC1-217ENST00000521067 RRP12Q5JTH9 1297 aaKnown RBP23.96■■□□□ 1.43
PABPC1-217ENST00000521067 MFSD5Q6N075 450 aa23.96■■□□□ 1.43
PABPC1-217ENST00000521067 BTNL9Q6UXG8 535 aa23.96■■□□□ 1.43
PABPC1-217ENST00000521067 EEPD1Q7L9B9 569 aa23.96■■□□□ 1.43
PABPC1-217ENST00000521067 FAM126BQ8IXS8 530 aa23.96■■□□□ 1.43
PABPC1-217ENST00000521067 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.96■■□□□ 1.43
PABPC1-217ENST00000521067 LNPKQ9C0E8 428 aa23.96■■□□□ 1.43
PABPC1-217ENST00000521067 RANBP17Q9H2T7 1088 aaKnown RBP23.96■■□□□ 1.43
PABPC1-217ENST00000521067 CCPG1Q9ULG6 757 aa23.96■■□□□ 1.43
PABPC1-217ENST00000521067 GRIN2DO15399 1336 aa23.95■■□□□ 1.42
PABPC1-217ENST00000521067 ICAM1P05362 532 aa23.95■■□□□ 1.42
PABPC1-217ENST00000521067 HAND2P61296 217 aa23.95■■□□□ 1.42
PABPC1-217ENST00000521067 CXCL17Q6UXB2 119 aa23.95■■□□□ 1.42
PABPC1-217ENST00000521067 NSMFQ6X4W1 530 aa23.95■■□□□ 1.42
PABPC1-217ENST00000521067 NOL8Q76FK4 1167 aaKnown RBP23.95■■□□□ 1.42
PABPC1-217ENST00000521067 MYLIPQ8WY64 445 aa23.95■■□□□ 1.42
PABPC1-217ENST00000521067 TOMM22Q9NS69 142 aa23.95■■□□□ 1.42
PABPC1-217ENST00000521067 TCP11L1Q9NUJ3 509 aa23.95■■□□□ 1.42
PABPC1-217ENST00000521067 MROH7Q68CQ1 1323 aa23.94■■□□□ 1.42
PABPC1-217ENST00000521067 FRMPD2Q68DX3 1309 aaPredicted RBP23.94■■□□□ 1.42
PABPC1-217ENST00000521067 DYNC1LI2O43237 492 aaPredicted RBP23.94■■□□□ 1.42
PABPC1-217ENST00000521067 CD4P01730 458 aa23.94■■□□□ 1.42
PABPC1-217ENST00000521067 TOP1P11387 765 aaKnown RBP23.94■■□□□ 1.42
PABPC1-217ENST00000521067 TLK2Q86UE8 772 aa23.94■■□□□ 1.42
PABPC1-217ENST00000521067 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.94■■□□□ 1.42
PABPC1-217ENST00000521067 FBXO16Q8IX29 292 aaPredicted RBP23.94■■□□□ 1.42
PABPC1-217ENST00000521067 SLC43A3Q8NBI5 491 aa23.94■■□□□ 1.42
PABPC1-217ENST00000521067 MORC4Q8TE76 937 aa23.94■■□□□ 1.42
PABPC1-217ENST00000521067 GPCPD1Q9NPB8 672 aa23.94■■□□□ 1.42
PABPC1-217ENST00000521067 CSF2RAP15509 400 aa23.93■■□□□ 1.42
PABPC1-217ENST00000521067 BAATQ14032 418 aaPredicted RBP23.93■■□□□ 1.42
PABPC1-217ENST00000521067 TMEM240Q5SV17 173 aa23.93■■□□□ 1.42
PABPC1-217ENST00000521067 SYDE2Q5VT97 1194 aa23.93■■□□□ 1.42
PABPC1-217ENST00000521067 IQSEC1Q6DN90 963 aa23.93■■□□□ 1.42
PABPC1-217ENST00000521067 SPTBN5Q9NRC6 3674 aaKnown RBP23.92■■□□□ 1.42
PABPC1-217ENST00000521067 CHD9Q3L8U1 2897 aa23.92■■□□□ 1.42
PABPC1-217ENST00000521067 NFIBO00712 420 aa23.92■■□□□ 1.42
PABPC1-217ENST00000521067 FSCN1Q16658 493 aaKnown RBP23.92■■□□□ 1.42
PABPC1-217ENST00000521067 TICAM2Q86XR7 235 aa23.92■■□□□ 1.42
PABPC1-217ENST00000521067 COL25A1Q9BXS0 654 aaPredicted RBP23.92■■□□□ 1.42
PABPC1-217ENST00000521067 PPP1R12CQ9BZL4 782 aa23.92■■□□□ 1.42
PABPC1-217ENST00000521067 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.91■■□□□ 1.42
PABPC1-217ENST00000521067 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.91■■□□□ 1.42
PABPC1-217ENST00000521067 TRIM6-TRIM34B2RNG4 842 aa23.91■■□□□ 1.42
PABPC1-217ENST00000521067 ACRP10323 421 aa23.91■■□□□ 1.42
PABPC1-217ENST00000521067 PDHBP11177 359 aa23.91■■□□□ 1.42
PABPC1-217ENST00000521067 B4GALNT3Q6L9W6 998 aa23.91■■□□□ 1.42
PABPC1-217ENST00000521067 TBC1D10CQ8IV04 446 aa23.91■■□□□ 1.42
PABPC1-217ENST00000521067 SMC5Q8IY18 1101 aa23.91■■□□□ 1.42
PABPC1-217ENST00000521067 CLEC4DQ8WXI8 215 aa23.91■■□□□ 1.42
PABPC1-217ENST00000521067 RILPL2Q969X0 211 aa23.91■■□□□ 1.42
PABPC1-217ENST00000521067 ZMYM6O95789 1325 aa23.9■■□□□ 1.42
PABPC1-217ENST00000521067 CCDC171Q6TFL3 1326 aa23.9■■□□□ 1.42
PABPC1-217ENST00000521067 IGHDP01880 384 aa23.9■■□□□ 1.42
PABPC1-217ENST00000521067 CYP2C18P33260 490 aa23.9■■□□□ 1.42
PABPC1-217ENST00000521067 ITGA7Q13683 1181 aa23.9■■□□□ 1.42
PABPC1-217ENST00000521067 GRIN2CQ14957 1233 aa23.9■■□□□ 1.42
PABPC1-217ENST00000521067 AKNAD1Q5T1N1 836 aa23.9■■□□□ 1.42
PABPC1-217ENST00000521067 RASIP1Q5U651 963 aa23.9■■□□□ 1.42
PABPC1-217ENST00000521067 MAFAQ8NHW3 353 aaPredicted RBP23.9■■□□□ 1.42
PABPC1-217ENST00000521067 AP5M1Q9H0R1 490 aa23.9■■□□□ 1.42
PABPC1-217ENST00000521067 UMODL1Q5DID0 1318 aa23.89■■□□□ 1.42
PABPC1-217ENST00000521067 GRXCR1A8MXD5 290 aa23.89■■□□□ 1.41
PABPC1-217ENST00000521067 SDSP20132 328 aa23.89■■□□□ 1.41
PABPC1-217ENST00000521067 DNAJB2P25686 324 aa23.89■■□□□ 1.41
PABPC1-217ENST00000521067 PPIGQ13427 754 aaKnown RBP eCLIP23.89■■□□□ 1.41
PABPC1-217ENST00000521067 KIAA1211Q6ZU35 1233 aa23.89■■□□□ 1.41
PABPC1-217ENST00000521067 ZNF365Q70YC5 407 aa23.89■■□□□ 1.41
PABPC1-217ENST00000521067 VTA1Q9NP79 307 aa23.89■■□□□ 1.41
PABPC1-217ENST00000521067 Q9Y3F1 56 aa23.89■■□□□ 1.41
PABPC1-217ENST00000521067 TMEM265A0A087WTH1 108 aa23.88■■□□□ 1.41
PABPC1-217ENST00000521067 TLR3O15455 904 aaKnown RBP23.88■■□□□ 1.41
PABPC1-217ENST00000521067 CABYRO75952 493 aa23.88■■□□□ 1.41
PABPC1-217ENST00000521067 SNHG28P0DPA3 235 aa23.88■■□□□ 1.41
PABPC1-217ENST00000521067 ALDH5A1P51649 535 aaPredicted RBP23.88■■□□□ 1.41
PABPC1-217ENST00000521067 PSMC6P62333 389 aa23.88■■□□□ 1.41
PABPC1-217ENST00000521067 ZNF543Q08ER8 600 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms