RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 SPATA31A7Q8IWB4 1347 aa8.43□□□□□ -1.06
PABPC1-216ENST00000520868 ZC3H6P61129 1189 aaKnown RBP8.42□□□□□ -1.06
PABPC1-216ENST00000520868 CHRNA2Q15822 529 aa8.42□□□□□ -1.06
PABPC1-216ENST00000520868 EZH2Q15910 746 aaKnown RBP8.42□□□□□ -1.06
PABPC1-216ENST00000520868 FBXL19Q6PCT2 694 aa8.42□□□□□ -1.06
PABPC1-216ENST00000520868 POLR3KQ9Y2Y1 108 aaPredicted RBP8.42□□□□□ -1.06
PABPC1-216ENST00000520868 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.42□□□□□ -1.06
PABPC1-216ENST00000520868 PLCH1Q4KWH8 1693 aa8.41□□□□□ -1.06
PABPC1-216ENST00000520868 DLC1Q96QB1 1528 aa8.41□□□□□ -1.06
PABPC1-216ENST00000520868 UPK3BL1B0FP48 263 aa8.41□□□□□ -1.06
PABPC1-216ENST00000520868 UPK3BL2E5RIL1 263 aa8.41□□□□□ -1.06
PABPC1-216ENST00000520868 H3BS24 57 aa8.41□□□□□ -1.06
PABPC1-216ENST00000520868 GRIN3BO60391 1043 aa8.41□□□□□ -1.06
PABPC1-216ENST00000520868 GREM1O60565 184 aa8.41□□□□□ -1.06
PABPC1-216ENST00000520868 ZNF296Q8WUU4 475 aaPredicted RBP8.41□□□□□ -1.06
PABPC1-216ENST00000520868 ATP13A1Q9HD20 1204 aa8.41□□□□□ -1.06
PABPC1-216ENST00000520868 USP35Q9P2H5 1018 aa8.41□□□□□ -1.06
PABPC1-216ENST00000520868 KLHL3Q9UH77 587 aa8.41□□□□□ -1.06
PABPC1-216ENST00000520868 NWD2Q9ULI1 1742 aa8.4□□□□□ -1.06
PABPC1-216ENST00000520868 EIF3AQ14152 1382 aaKnown RBP8.4□□□□□ -1.06
PABPC1-216ENST00000520868 RAB3GAP2Q9H2M9 1393 aa8.4□□□□□ -1.06
PABPC1-216ENST00000520868 SPATA31A1Q5TZJ5 1347 aa8.4□□□□□ -1.06
PABPC1-216ENST00000520868 TLR3O15455 904 aaKnown RBP8.4□□□□□ -1.06
PABPC1-216ENST00000520868 EVA1CP58658 441 aa8.4□□□□□ -1.06
PABPC1-216ENST00000520868 TNK2Q07912 1038 aa8.4□□□□□ -1.06
PABPC1-216ENST00000520868 FBXO27Q8NI29 283 aa8.4□□□□□ -1.06
PABPC1-216ENST00000520868 CDK19Q9BWU1 502 aa8.4□□□□□ -1.06
PABPC1-216ENST00000520868 KCNH3Q9ULD8 1083 aa8.4□□□□□ -1.06
PABPC1-216ENST00000520868 KIAA0232Q92628 1395 aa8.39□□□□□ -1.07
PABPC1-216ENST00000520868 RBM47A0AV96 593 aaKnown RBP8.39□□□□□ -1.07
PABPC1-216ENST00000520868 TNNI2P48788 182 aa8.39□□□□□ -1.07
PABPC1-216ENST00000520868 PPP1R13LQ8WUF5 828 aa8.39□□□□□ -1.07
PABPC1-216ENST00000520868 CCDC74BQ96LY2 380 aa8.39□□□□□ -1.07
PABPC1-216ENST00000520868 TRIT1Q9H3H1 467 aaKnown RBP8.39□□□□□ -1.07
PABPC1-216ENST00000520868 ADGRB1O14514 1584 aa8.39□□□□□ -1.07
PABPC1-216ENST00000520868 ABCA3Q99758 1704 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 ACEP12821 1306 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 ZNF76P36508 570 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 CHMP4BP1P59074 171 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 NBPF8Q3BBV2 869 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 TMPRSS7Q7RTY8 843 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 FLAD1Q8NFF5 587 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 RNF141Q8WVD5 230 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 UBE2FQ969M7 185 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 CCDC120Q96HB5 630 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 CAMKK2Q96RR4 588 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 CARS2Q9HA77 564 aaKnown RBP8.38□□□□□ -1.07
PABPC1-216ENST00000520868 BRMS1Q9HCU9 246 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 METTL5Q9NRN9 209 aaKnown RBP8.38□□□□□ -1.07
PABPC1-216ENST00000520868 ZSWIM5Q9P217 1185 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 ADAMTS1Q9UHI8 967 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 TULP4Q9NRJ4 1543 aa8.38□□□□□ -1.07
PABPC1-216ENST00000520868 COL14A1Q05707 1796 aaKnown RBP8.38□□□□□ -1.07
PABPC1-216ENST00000520868 TRPM3Q9HCF6 1732 aaPredicted RBP8.37□□□□□ -1.07
PABPC1-216ENST00000520868 ADGRB2O60241 1585 aa8.37□□□□□ -1.07
PABPC1-216ENST00000520868 WASH4PA8MWX3 477 aa8.37□□□□□ -1.07
PABPC1-216ENST00000520868 CHURC1-FNTBB4DL54 471 aa8.37□□□□□ -1.07
PABPC1-216ENST00000520868 ATE1O95260 518 aa8.37□□□□□ -1.07
PABPC1-216ENST00000520868 PHACTR4Q8IZ21 702 aa8.37□□□□□ -1.07
PABPC1-216ENST00000520868 Q96M66 194 aa8.37□□□□□ -1.07
PABPC1-216ENST00000520868 ASPNQ9BXN1 380 aa8.37□□□□□ -1.07
PABPC1-216ENST00000520868 PCDHB14Q9Y5E9 798 aa8.37□□□□□ -1.07
PABPC1-216ENST00000520868 NRAPQ86VF7 1730 aa8.37□□□□□ -1.07
PABPC1-216ENST00000520868 APOBRQ0VD83 1088 aa8.36□□□□□ -1.07
PABPC1-216ENST00000520868 FAM168AQ92567 244 aa8.36□□□□□ -1.07
PABPC1-216ENST00000520868 NT5C1AQ9BXI3 368 aa8.36□□□□□ -1.07
PABPC1-216ENST00000520868 BACH2Q9BYV9 841 aa8.36□□□□□ -1.07
PABPC1-216ENST00000520868 GPATCH2Q9NW75 528 aa8.36□□□□□ -1.07
PABPC1-216ENST00000520868 GMIPQ9P107 970 aa8.36□□□□□ -1.07
PABPC1-216ENST00000520868 ALS2Q96Q42 1657 aa8.36□□□□□ -1.07
PABPC1-216ENST00000520868 LDLRAD1Q5T700 205 aa8.35□□□□□ -1.07
PABPC1-216ENST00000520868 KIAA0825Q8IV33 1275 aa8.35□□□□□ -1.07
PABPC1-216ENST00000520868 REXO1Q8N1G1 1221 aaKnown RBP8.35□□□□□ -1.07
PABPC1-216ENST00000520868 DTWD2Q8NBA8 298 aa8.35□□□□□ -1.07
PABPC1-216ENST00000520868 BAHD1Q8TBE0 780 aaPredicted RBP8.35□□□□□ -1.07
PABPC1-216ENST00000520868 GPR62Q9BZJ7 368 aa8.35□□□□□ -1.07
PABPC1-216ENST00000520868 EHMT1Q9H9B1 1298 aa8.35□□□□□ -1.07
PABPC1-216ENST00000520868 ATP7BP35670 1465 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 LRP5O75197 1615 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 RAG1P15918 1043 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 VAMP1P23763 118 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 GBP1P32455 592 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 CRKP46108 304 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 ZNF165P49910 485 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 SEZ6Q53EL9 994 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 FYB2Q5VWT5 728 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 TCP11L2Q8N4U5 519 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 KREMEN1Q96MU8 473 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 SPON2Q9BUD6 331 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 UBP1Q9NZI7 540 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 CTNND2Q9UQB3 1225 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 DISP2A7MBM2 1401 aa8.34□□□□□ -1.07
PABPC1-216ENST00000520868 SLC22A31A6NKX4 558 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 RGS13O14921 159 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 DNAJA2O60884 412 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 GCP02774 474 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 RGPD1P0DJD0 1748 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 AFMP43652 599 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 LRRFIP1Q32MZ4 808 aaKnown RBP8.33□□□□□ -1.08
PABPC1-216ENST00000520868 ARSHQ5FYA8 562 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms