RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 GNA11P29992 359 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 GJA5P36382 358 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 NLRP5P59047 1200 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 MOGSQ13724 837 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 GNL2Q13823 731 aaKnown RBP9.78□□□□□ -0.84
VAPB-206ENST00000520497 FOXD4L6Q3SYB3 417 aaPredicted RBP9.78□□□□□ -0.84
VAPB-206ENST00000520497 EARS2Q5JPH6 523 aaKnown RBP9.78□□□□□ -0.84
VAPB-206ENST00000520497 FOXD4L3Q6VB84 417 aaPredicted RBP9.78□□□□□ -0.84
VAPB-206ENST00000520497 CATSPERGQ6ZRH7 1159 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 FBXO11Q86XK2 927 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 BLIDQ8IZY5 108 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 PRPF38AQ8NAV1 312 aaKnown RBP9.78□□□□□ -0.84
VAPB-206ENST00000520497 KIFC2Q96AC6 838 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 OPTNQ96CV9 577 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 ZNF396Q96N95 335 aaPredicted RBP9.78□□□□□ -0.84
VAPB-206ENST00000520497 AMNQ9BXJ7 453 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 TANGO6Q9C0B7 1094 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 TMOD4Q9NZQ9 345 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 CFAP45Q9UL16 551 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 ADAMTS5Q9UNA0 930 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 CNPY2Q9Y2B0 182 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 ZNF536O15090 1300 aa9.78□□□□□ -0.84
VAPB-206ENST00000520497 MGAMO43451 1857 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 LRRC37A2A6NM11 1700 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 FAM205CA6NFA0 338 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 SMCO2A6NFE2 343 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 OPLAHO14841 1288 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 GABBR2O75899 941 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 PRR29P0C7W0 189 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 FDX1P10109 184 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 HOXA7P31268 230 aaPredicted RBP9.77□□□□□ -0.85
VAPB-206ENST00000520497 CLK2P49760 499 aaKnown RBP9.77□□□□□ -0.85
VAPB-206ENST00000520497 TOB1P50616 345 aaPredicted RBP9.77□□□□□ -0.85
VAPB-206ENST00000520497 SNAP25P60880 206 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 TRAF1Q13077 416 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 NOM1Q5C9Z4 860 aaKnown RBP9.77□□□□□ -0.85
VAPB-206ENST00000520497 TEX2Q8IWB9 1127 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 C2orf69Q8N8R5 385 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 REPS2Q8NFH8 660 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 USP28Q96RU2 1077 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 SCAND2PQ9GZW5 306 aaPredicted RBP9.77□□□□□ -0.85
VAPB-206ENST00000520497 SLC38A10Q9HBR0 1119 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 C6orf50Q9HD87 102 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 RIC8AQ9NPQ8 531 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 POLR3EQ9NVU0 708 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 PCDHA6Q9UN73 950 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 PCDHA8Q9Y5H6 950 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 PCDHA1Q9Y5I3 950 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 DDX49Q9Y6V7 483 aaKnown RBP9.77□□□□□ -0.85
VAPB-206ENST00000520497 ELP1O95163 1332 aa9.77□□□□□ -0.85
VAPB-206ENST00000520497 GOLGA6L4A6NEF3 574 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 SPDYE16A6NNV3 312 aaPredicted RBP9.76□□□□□ -0.85
VAPB-206ENST00000520497 USP17L15C9J2P7 530 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 USP17L13C9JLJ4 530 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 USP17L11C9JVI0 530 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 USP17L18D6R9N7 530 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 USP17L22D6RA61 530 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 USP17L17D6RBQ6 530 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 USP17L19D6RCP7 530 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 USP17L20D6RJB6 530 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 VWA5AO00534 786 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 FIBPO43427 364 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 ICAM1P05362 532 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 NASPP49321 788 aaPredicted RBP9.76□□□□□ -0.85
VAPB-206ENST00000520497 ADCY7P51828 1080 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 USP17L24Q0WX57 530 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 KLHL40Q2TBA0 621 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 RILPL1Q5EBL4 403 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 TREML2Q5T2D2 321 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 REXO1Q8N1G1 1221 aaKnown RBP9.76□□□□□ -0.85
VAPB-206ENST00000520497 BICD2Q8TD16 824 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 RASGRP4Q8TDF6 673 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 LEO1Q8WVC0 666 aaPredicted RBP9.76□□□□□ -0.85
VAPB-206ENST00000520497 SLC10A4Q96EP9 437 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 WNK4Q96J92 1243 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 FTOQ9C0B1 505 aaKnown RBP eCLIP9.76□□□□□ -0.85
VAPB-206ENST00000520497 GLT8D2Q9H1C3 349 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 GDPD2Q9HCC8 539 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 LMBRD1Q9NUN5 540 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 RTEL1Q9NZ71 1219 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 AGTPBP1Q9UPW5 1226 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 DOCK5Q9H7D0 1870 aa9.76□□□□□ -0.85
VAPB-206ENST00000520497 FAM155AB1AL88 458 aaPredicted RBP9.75□□□□□ -0.85
VAPB-206ENST00000520497 MEIS2O14770 477 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 ATP2A1O14983 1001 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 PRPF40AO75400 957 aaKnown RBP9.75□□□□□ -0.85
VAPB-206ENST00000520497 YEATS4O95619 227 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 ZBTB48P10074 688 aaPredicted RBP9.75□□□□□ -0.85
VAPB-206ENST00000520497 TAL1P17542 331 aaPredicted RBP9.75□□□□□ -0.85
VAPB-206ENST00000520497 TRAPPC10P48553 1259 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 MAP2K1Q02750 393 aaPredicted RBP9.75□□□□□ -0.85
VAPB-206ENST00000520497 SNAPC2Q13487 334 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 COG2Q14746 738 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 USH1GQ495M9 461 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 CCDC174Q6PII3 467 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 LBX2Q6XYB7 198 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 FASTKD5Q7L8L6 764 aaKnown RBP9.75□□□□□ -0.85
VAPB-206ENST00000520497 KRT25Q7Z3Z0 450 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 LINC00301Q8NCQ3 95 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms