RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 TMEM62Q0P6H9 643 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 ZNF385BQ569K4 471 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 BICRALQ6AI39 1079 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 KIAA1211LQ6NV74 962 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 VHLLQ6RSH7 139 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 CYP2R1Q6VVX0 501 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 PPP1R14AQ96A00 147 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 SHDQ96IW2 340 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 PTCHD1Q96NR3 888 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 ACSL6Q9UKU0 697 aa7.17□□□□□ -1.26
SKP1-207ENST00000520417 MSL3P1P0C860 447 aa7.16□□□□□ -1.26
SKP1-207ENST00000520417 PI3P19957 117 aa7.16□□□□□ -1.26
SKP1-207ENST00000520417 MVKQ03426 396 aa7.16□□□□□ -1.26
SKP1-207ENST00000520417 SSPNQ14714 243 aa7.16□□□□□ -1.26
SKP1-207ENST00000520417 SIAH1Q8IUQ4 282 aa7.16□□□□□ -1.26
SKP1-207ENST00000520417 C19orf47Q8N9M1 422 aaKnown RBP7.16□□□□□ -1.26
SKP1-207ENST00000520417 SEC16BQ96JE7 1060 aa7.16□□□□□ -1.26
SKP1-207ENST00000520417 CNTD2Q9H8S5 307 aa7.16□□□□□ -1.26
SKP1-207ENST00000520417 KLHL14Q9P2G3 628 aa7.16□□□□□ -1.26
SKP1-207ENST00000520417 CCDC9Q9Y3X0 531 aaKnown RBP7.16□□□□□ -1.26
SKP1-207ENST00000520417 A0A087WZG4 1122 aa7.15□□□□□ -1.26
SKP1-207ENST00000520417 ERCC5P28715 1186 aaPredicted RBP7.15□□□□□ -1.26
SKP1-207ENST00000520417 CEBPAP49715 358 aaPredicted RBP7.15□□□□□ -1.26
SKP1-207ENST00000520417 NCKAP1LP55160 1127 aa7.15□□□□□ -1.26
SKP1-207ENST00000520417 SIGLEC10Q96LC7 697 aa7.15□□□□□ -1.26
SKP1-207ENST00000520417 KLHL25Q9H0H3 589 aa7.15□□□□□ -1.26
SKP1-207ENST00000520417 CAPN10Q9HC96 672 aa7.15□□□□□ -1.26
SKP1-207ENST00000520417 DBR1Q9UK59 544 aaKnown RBP7.15□□□□□ -1.26
SKP1-207ENST00000520417 MRVI1Q9Y6F6 885 aa7.15□□□□□ -1.26
SKP1-207ENST00000520417 HRKO00198 91 aa7.14□□□□□ -1.27
SKP1-207ENST00000520417 SEPHS1P49903 392 aa7.14□□□□□ -1.27
SKP1-207ENST00000520417 CDR1P51861 262 aa7.14□□□□□ -1.27
SKP1-207ENST00000520417 YBX1P67809 324 aaKnown RBP7.14□□□□□ -1.27
SKP1-207ENST00000520417 AMPD2Q01433 879 aa7.14□□□□□ -1.27
SKP1-207ENST00000520417 RPTNQ6XPR3 784 aa7.14□□□□□ -1.27
SKP1-207ENST00000520417 FAM169BQ8N8A8 192 aa7.14□□□□□ -1.27
SKP1-207ENST00000520417 PANK1Q8TE04 598 aa7.14□□□□□ -1.27
SKP1-207ENST00000520417 KLHL6Q8WZ60 621 aa7.14□□□□□ -1.27
SKP1-207ENST00000520417 TNFRSF12AQ9NP84 129 aa7.14□□□□□ -1.27
SKP1-207ENST00000520417 CGGBP1Q9UFW8 167 aaPredicted RBP7.14□□□□□ -1.27
SKP1-207ENST00000520417 N4BP3O15049 544 aa7.13□□□□□ -1.27
SKP1-207ENST00000520417 SSBP05455 408 aaKnown RBP eCLIP7.13□□□□□ -1.27
SKP1-207ENST00000520417 BMP7P18075 431 aa7.13□□□□□ -1.27
SKP1-207ENST00000520417 L1CAMP32004 1257 aa7.13□□□□□ -1.27
SKP1-207ENST00000520417 TCERG1LQ5VWI1 586 aa7.13□□□□□ -1.27
SKP1-207ENST00000520417 ZC3H14Q6PJT7 736 aaKnown RBP7.13□□□□□ -1.27
SKP1-207ENST00000520417 VPS37DQ86XT2 251 aa7.13□□□□□ -1.27
SKP1-207ENST00000520417 MZB1Q8WU39 189 aa7.13□□□□□ -1.27
SKP1-207ENST00000520417 MCMBPQ9BTE3 642 aa7.13□□□□□ -1.27
SKP1-207ENST00000520417 PDLIM7Q9NR12 457 aa7.13□□□□□ -1.27
SKP1-207ENST00000520417 STRIP2Q9ULQ0 834 aa7.13□□□□□ -1.27
SKP1-207ENST00000520417 AKT3Q9Y243 479 aa7.13□□□□□ -1.27
SKP1-207ENST00000520417 C2orf71A6NGG8 1288 aa7.12□□□□□ -1.27
SKP1-207ENST00000520417 AURKAO14965 403 aa7.12□□□□□ -1.27
SKP1-207ENST00000520417 ZNF200P98182 395 aaPredicted RBP7.12□□□□□ -1.27
SKP1-207ENST00000520417 EEF1DP3Q658K8 133 aa7.12□□□□□ -1.27
SKP1-207ENST00000520417 AMIGO3Q86WK7 504 aa7.12□□□□□ -1.27
SKP1-207ENST00000520417 LDHDQ86WU2 507 aa7.12□□□□□ -1.27
SKP1-207ENST00000520417 CPNE8Q86YQ8 564 aa7.12□□□□□ -1.27
SKP1-207ENST00000520417 APBA2Q99767 749 aa7.12□□□□□ -1.27
SKP1-207ENST00000520417 BACE2Q9Y5Z0 518 aa7.12□□□□□ -1.27
SKP1-207ENST00000520417 ANKRD34BA5PLL1 514 aa7.11□□□□□ -1.27
SKP1-207ENST00000520417 F8W031 263 aaPredicted RBP7.11□□□□□ -1.27
SKP1-207ENST00000520417 KCNH1O95259 989 aa7.11□□□□□ -1.27
SKP1-207ENST00000520417 INHBBP09529 407 aa7.11□□□□□ -1.27
SKP1-207ENST00000520417 ATF4P18848 351 aaPredicted RBP7.11□□□□□ -1.27
SKP1-207ENST00000520417 CASP7P55210 303 aa7.11□□□□□ -1.27
SKP1-207ENST00000520417 NR1I3Q14994 352 aa7.11□□□□□ -1.27
SKP1-207ENST00000520417 VMACQ2NL98 169 aa7.11□□□□□ -1.27
SKP1-207ENST00000520417 PLEKHN1Q494U1 663 aaPredicted RBP7.11□□□□□ -1.27
SKP1-207ENST00000520417 LARP1BQ659C4 914 aaKnown RBP7.11□□□□□ -1.27
SKP1-207ENST00000520417 USP33Q8TEY7 942 aa7.11□□□□□ -1.27
SKP1-207ENST00000520417 RXFP1Q9HBX9 757 aa7.11□□□□□ -1.27
SKP1-207ENST00000520417 APEX2Q9UBZ4 518 aa7.11□□□□□ -1.27
SKP1-207ENST00000520417 RWDD3Q9Y3V2 267 aa7.11□□□□□ -1.27
SKP1-207ENST00000520417 HCFC2Q9Y5Z7 792 aa7.11□□□□□ -1.27
SKP1-207ENST00000520417 ZC3H12DA2A288 527 aaKnown RBP7.1□□□□□ -1.27
SKP1-207ENST00000520417 NOP56O00567 594 aaKnown RBP7.1□□□□□ -1.27
SKP1-207ENST00000520417 BUB1BO60566 1050 aaPredicted RBP7.1□□□□□ -1.27
SKP1-207ENST00000520417 DBHP09172 617 aa7.1□□□□□ -1.27
SKP1-207ENST00000520417 AFF3P51826 1226 aaKnown RBP7.1□□□□□ -1.27
SKP1-207ENST00000520417 RCSD1Q6JBY9 416 aa7.1□□□□□ -1.27
SKP1-207ENST00000520417 CNKSR3Q6P9H4 555 aa7.1□□□□□ -1.27
SKP1-207ENST00000520417 PAQR3Q6TCH7 311 aa7.1□□□□□ -1.27
SKP1-207ENST00000520417 TMEM151BQ8IW70 566 aa7.1□□□□□ -1.27
SKP1-207ENST00000520417 ARHGEF39Q8N4T4 335 aa7.1□□□□□ -1.27
SKP1-207ENST00000520417 ZNF428Q96B54 188 aa7.1□□□□□ -1.27
SKP1-207ENST00000520417 ZCCHC4Q9H5U6 513 aa7.1□□□□□ -1.27
SKP1-207ENST00000520417 NPHP3-ACAD11A0A0J9YXS1 232 aa7.09□□□□□ -1.27
SKP1-207ENST00000520417 SMAD7O15105 426 aaKnown RBP7.09□□□□□ -1.27
SKP1-207ENST00000520417 CYBBP04839 570 aa7.09□□□□□ -1.27
SKP1-207ENST00000520417 NAT2P11245 290 aa7.09□□□□□ -1.27
SKP1-207ENST00000520417 PAMP19021 973 aa7.09□□□□□ -1.27
SKP1-207ENST00000520417 MAPKAPK2P49137 400 aa7.09□□□□□ -1.27
SKP1-207ENST00000520417 GNL2Q13823 731 aaKnown RBP7.09□□□□□ -1.27
SKP1-207ENST00000520417 CABP7Q86V35 215 aa7.09□□□□□ -1.27
SKP1-207ENST00000520417 RCC1LQ96I51 464 aaKnown RBP7.09□□□□□ -1.27
SKP1-207ENST00000520417 GULP1Q9UBP9 304 aa7.09□□□□□ -1.27
SKP1-207ENST00000520417 SUSD2Q9UGT4 822 aa7.09□□□□□ -1.27
SKP1-207ENST00000520417 PFKLP17858 780 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms