RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 TRERF1Q96PN7 1200 aa13.97□□□□□ -0.17
POLB-208ENST00000520008 COL25A1Q9BXS0 654 aaPredicted RBP13.97□□□□□ -0.17
POLB-208ENST00000520008 SPC25Q9HBM1 224 aa13.97□□□□□ -0.17
POLB-208ENST00000520008 CYP39A1Q9NYL5 469 aa13.97□□□□□ -0.17
POLB-208ENST00000520008 ZMYM6O95789 1325 aa13.96□□□□□ -0.17
POLB-208ENST00000520008 ASB14A6NK59 587 aa13.96□□□□□ -0.17
POLB-208ENST00000520008 CD4P01730 458 aa13.96□□□□□ -0.17
POLB-208ENST00000520008 PDE1AP54750 535 aa13.96□□□□□ -0.17
POLB-208ENST00000520008 TNFAIP2Q03169 654 aa13.96□□□□□ -0.17
POLB-208ENST00000520008 MUM1L1Q5H9M0 696 aa13.96□□□□□ -0.17
POLB-208ENST00000520008 GNASQ5JWF2 1037 aa13.96□□□□□ -0.17
POLB-208ENST00000520008 TICAM2Q86XR7 235 aa13.96□□□□□ -0.17
POLB-208ENST00000520008 MORC4Q8TE76 937 aa13.96□□□□□ -0.17
POLB-208ENST00000520008 MYLIPQ8WY64 445 aa13.96□□□□□ -0.17
POLB-208ENST00000520008 EVI5LQ96CN4 794 aa13.96□□□□□ -0.17
POLB-208ENST00000520008 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.96□□□□□ -0.17
POLB-208ENST00000520008 RANBP17Q9H2T7 1088 aaKnown RBP13.96□□□□□ -0.17
POLB-208ENST00000520008 HELLSQ9NRZ9 838 aa13.96□□□□□ -0.17
POLB-208ENST00000520008 DDX49Q9Y6V7 483 aaKnown RBP13.96□□□□□ -0.17
POLB-208ENST00000520008 ICAM1P05362 532 aa13.95□□□□□ -0.18
POLB-208ENST00000520008 ALAS1P13196 640 aa13.95□□□□□ -0.18
POLB-208ENST00000520008 BEX3Q00994 111 aa13.95□□□□□ -0.18
POLB-208ENST00000520008 IKQ13123 557 aaPredicted RBP13.95□□□□□ -0.18
POLB-208ENST00000520008 HDAC1Q13547 482 aaPredicted RBP13.95□□□□□ -0.18
POLB-208ENST00000520008 TAPT1Q6NXT6 567 aa13.95□□□□□ -0.18
POLB-208ENST00000520008 CCDC174Q6PII3 467 aa13.95□□□□□ -0.18
POLB-208ENST00000520008 BTNL9Q6UXG8 535 aa13.95□□□□□ -0.18
POLB-208ENST00000520008 TLK2Q86UE8 772 aa13.95□□□□□ -0.18
POLB-208ENST00000520008 MAFAQ8NHW3 353 aaPredicted RBP13.95□□□□□ -0.18
POLB-208ENST00000520008 DCAF4Q8WV16 495 aa13.95□□□□□ -0.18
POLB-208ENST00000520008 LAMA4Q16363 1823 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 GRIN2DO15399 1336 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 MUC3AQ02505 3323 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 A0A0D9SFI3 127 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.94□□□□□ -0.18
POLB-208ENST00000520008 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.94□□□□□ -0.18
POLB-208ENST00000520008 RANBP6O60518 1105 aaKnown RBP13.94□□□□□ -0.18
POLB-208ENST00000520008 FGAP02671 866 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 SMPD1P17405 629 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 PTGS1P23219 599 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 DNAJB2P25686 324 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 SNAP25P60880 206 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 TMEM240Q5SV17 173 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 CHMP4CQ96CF2 233 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 FAM227BQ96M60 508 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 PDGFCQ9NRA1 345 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 TCP11L1Q9NUJ3 509 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 ISY1Q9ULR0 285 aaKnown RBP13.94□□□□□ -0.18
POLB-208ENST00000520008 Q9Y3F1 56 aa13.94□□□□□ -0.18
POLB-208ENST00000520008 CABYRO75952 493 aa13.93□□□□□ -0.18
POLB-208ENST00000520008 FOSL2P15408 326 aa13.93□□□□□ -0.18
POLB-208ENST00000520008 CSF2RAP15509 400 aa13.93□□□□□ -0.18
POLB-208ENST00000520008 PPIGQ13427 754 aaKnown RBP eCLIP13.93□□□□□ -0.18
POLB-208ENST00000520008 GRIN2CQ14957 1233 aa13.93□□□□□ -0.18
POLB-208ENST00000520008 FSCN1Q16658 493 aaKnown RBP13.93□□□□□ -0.18
POLB-208ENST00000520008 TMEM63BQ5T3F8 832 aa13.93□□□□□ -0.18
POLB-208ENST00000520008 ANKRD45Q5TZF3 282 aa13.93□□□□□ -0.18
POLB-208ENST00000520008 TTBK2Q6IQ55 1244 aa13.93□□□□□ -0.18
POLB-208ENST00000520008 CXCL17Q6UXB2 119 aa13.93□□□□□ -0.18
POLB-208ENST00000520008 ZNF589Q86UQ0 364 aaPredicted RBP13.93□□□□□ -0.18
POLB-208ENST00000520008 FBXO16Q8IX29 292 aaPredicted RBP13.93□□□□□ -0.18
POLB-208ENST00000520008 PURBQ96QR8 312 aaKnown RBP13.93□□□□□ -0.18
POLB-208ENST00000520008 CRBNQ96SW2 442 aa13.93□□□□□ -0.18
POLB-208ENST00000520008 TMEM47Q9BQJ4 181 aa13.93□□□□□ -0.18
POLB-208ENST00000520008 VTA1Q9NP79 307 aa13.93□□□□□ -0.18
POLB-208ENST00000520008 CCPG1Q9ULG6 757 aa13.93□□□□□ -0.18
POLB-208ENST00000520008 CHD9Q3L8U1 2897 aa13.93□□□□□ -0.18
POLB-208ENST00000520008 LOC102724159A0A0B4J2E5 919 aa13.92□□□□□ -0.18
POLB-208ENST00000520008 TLR3O15455 904 aaKnown RBP13.92□□□□□ -0.18
POLB-208ENST00000520008 SNHG28P0DPA3 235 aa13.92□□□□□ -0.18
POLB-208ENST00000520008 HSPD1P10809 573 aaKnown RBP13.92□□□□□ -0.18
POLB-208ENST00000520008 TOP1P11387 765 aaKnown RBP13.92□□□□□ -0.18
POLB-208ENST00000520008 PWP2Q15269 919 aaKnown RBP13.92□□□□□ -0.18
POLB-208ENST00000520008 MCMDC2Q4G0Z9 681 aa13.92□□□□□ -0.18
POLB-208ENST00000520008 IQSEC1Q6DN90 963 aa13.92□□□□□ -0.18
POLB-208ENST00000520008 PSRC1Q6PGN9 363 aaPredicted RBP13.92□□□□□ -0.18
POLB-208ENST00000520008 TMEM199Q8N511 208 aa13.92□□□□□ -0.18
POLB-208ENST00000520008 SEZ6LQ9BYH1 1024 aa13.92□□□□□ -0.18
POLB-208ENST00000520008 PPP1R12CQ9BZL4 782 aa13.92□□□□□ -0.18
POLB-208ENST00000520008 GBF1Q92538 1859 aa13.92□□□□□ -0.18
POLB-208ENST00000520008 UMODL1Q5DID0 1318 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 NFIBO00712 420 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 PDHBP11177 359 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 SLC16A2P36021 539 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 ITGA7Q13683 1181 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 CCDC96Q2M329 555 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 SYDE2Q5VT97 1194 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 NSMFQ6X4W1 530 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 ZNF365Q70YC5 407 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 EEPD1Q7L9B9 569 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 VTI1AQ96AJ9 217 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 TIFAQ96CG3 184 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 PBX4Q9BYU1 374 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 ZNF576Q9H609 170 aa13.91□□□□□ -0.18
POLB-208ENST00000520008 CCDC171Q6TFL3 1326 aa13.9□□□□□ -0.18
POLB-208ENST00000520008 RBM47A0AV96 593 aaKnown RBP13.9□□□□□ -0.18
POLB-208ENST00000520008 DYNC1LI2O43237 492 aaPredicted RBP13.9□□□□□ -0.18
POLB-208ENST00000520008 ACRP10323 421 aa13.9□□□□□ -0.18
POLB-208ENST00000520008 CYP2C18P33260 490 aa13.9□□□□□ -0.18
POLB-208ENST00000520008 PBX2P40425 430 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms