RNA–Protein interactions for RNA: ENST00000519686.6

VNN3-212, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-212ENST00000519686 VPS53Q5VIR6 699 aa10.7□□□□□ -0.7
VNN3-212ENST00000519686 MAMDC4Q6UXC1 1216 aa10.7□□□□□ -0.7
VNN3-212ENST00000519686 KCTD1Q719H9 257 aa10.7□□□□□ -0.7
VNN3-212ENST00000519686 NUP133Q8WUM0 1156 aa10.7□□□□□ -0.7
VNN3-212ENST00000519686 STAG1Q8WVM7 1258 aa10.7□□□□□ -0.7
VNN3-212ENST00000519686 RILPL2Q969X0 211 aa10.7□□□□□ -0.7
VNN3-212ENST00000519686 LENG1Q96BZ8 264 aaPredicted RBP10.7□□□□□ -0.7
VNN3-212ENST00000519686 LNPKQ9C0E8 428 aa10.7□□□□□ -0.7
VNN3-212ENST00000519686 ACAD9Q9H845 621 aa10.7□□□□□ -0.7
VNN3-212ENST00000519686 SPC25Q9HBM1 224 aa10.7□□□□□ -0.7
VNN3-212ENST00000519686 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.7□□□□□ -0.7
VNN3-212ENST00000519686 DNAH12Q6ZR08 3092 aa10.7□□□□□ -0.7
VNN3-212ENST00000519686 SMCHD1A6NHR9 2005 aa10.7□□□□□ -0.7
VNN3-212ENST00000519686 FOXP2O15409 715 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 NMT2O60551 498 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 PQBP1O60828 265 aaKnown RBP10.69□□□□□ -0.7
VNN3-212ENST00000519686 SNAI1O95863 264 aaPredicted RBP10.69□□□□□ -0.7
VNN3-212ENST00000519686 MFAP1P55081 439 aaKnown RBP10.69□□□□□ -0.7
VNN3-212ENST00000519686 ACVR2BQ13705 512 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 C1orf53Q5VUE5 145 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 RCSD1Q6JBY9 416 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 B4GALNT3Q6L9W6 998 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 CCDC174Q6PII3 467 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 TICAM2Q86XR7 235 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 FAM227BQ96M60 508 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 TSEN34Q9BSV6 310 aaKnown RBP10.69□□□□□ -0.7
VNN3-212ENST00000519686 ABHD16BQ9H3Z7 469 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 INCENPQ9NQS7 918 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 STARD7Q9NQZ5 370 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 IL17RBQ9NRM6 502 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 RNF146Q9NTX7 359 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.69□□□□□ -0.7
VNN3-212ENST00000519686 ANAPC4Q9UJX5 808 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 SYNRGQ9UMZ2 1314 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 LTBP2Q14767 1821 aa10.69□□□□□ -0.7
VNN3-212ENST00000519686 A0A0D9SFI3 127 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 ORC4O43929 436 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 PLA2G6O60733 806 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 DUSP11O75319 330 aaKnown RBP10.68□□□□□ -0.7
VNN3-212ENST00000519686 FGAP02671 866 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 CLTBP09497 229 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 C6orf222P0C671 652 aaPredicted RBP10.68□□□□□ -0.7
VNN3-212ENST00000519686 ALAS1P13196 640 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 ACLYP53396 1101 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 TLE2Q04725 743 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 ALX1Q15699 326 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 TKFCQ3LXA3 575 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 CCDC144BQ3MJ40 725 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 NOL8Q76FK4 1167 aaKnown RBP10.68□□□□□ -0.7
VNN3-212ENST00000519686 Q7L0L9 218 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.68□□□□□ -0.7
VNN3-212ENST00000519686 ARMCX2Q7L311 632 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 CCDC144CPQ8IYA2 1237 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 PCSK9Q8NBP7 692 aaKnown RBP10.68□□□□□ -0.7
VNN3-212ENST00000519686 SLC17A8Q8NDX2 589 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 BADQ92934 168 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 VTI1AQ96AJ9 217 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 AGBL1Q96MI9 1066 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 TRERF1Q96PN7 1200 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 PDLIM7Q9NR12 457 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 TACC3Q9Y6A5 838 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 LAMA3Q16787 3333 aa10.68□□□□□ -0.7
VNN3-212ENST00000519686 MOXD2PA6NHM9 499 aa10.67□□□□□ -0.7
VNN3-212ENST00000519686 DCDC2CA8MYV0 355 aa10.67□□□□□ -0.7
VNN3-212ENST00000519686 ADAMTS4O75173 837 aa10.67□□□□□ -0.7
VNN3-212ENST00000519686 HSPD1P10809 573 aaKnown RBP10.67□□□□□ -0.7
VNN3-212ENST00000519686 RAG1P15918 1043 aa10.67□□□□□ -0.7
VNN3-212ENST00000519686 SNAP25P60880 206 aa10.67□□□□□ -0.7
VNN3-212ENST00000519686 CNTN2Q02246 1040 aa10.67□□□□□ -0.7
VNN3-212ENST00000519686 NMIQ13287 307 aaPredicted RBP10.67□□□□□ -0.7
VNN3-212ENST00000519686 KCNA10Q16322 511 aa10.67□□□□□ -0.7
VNN3-212ENST00000519686 DCAF4Q8WV16 495 aa10.67□□□□□ -0.7
VNN3-212ENST00000519686 GLT1D1Q96MS3 346 aa10.67□□□□□ -0.7
VNN3-212ENST00000519686 CCPG1Q9ULG6 757 aa10.67□□□□□ -0.7
VNN3-212ENST00000519686 PRR12Q9ULL5 1215 aa10.67□□□□□ -0.7
VNN3-212ENST00000519686 ZMYM6O95789 1325 aa10.67□□□□□ -0.7
VNN3-212ENST00000519686 CCDC171Q6TFL3 1326 aa10.67□□□□□ -0.7
VNN3-212ENST00000519686 TRIM43BA6NCK2 446 aa10.66□□□□□ -0.7
VNN3-212ENST00000519686 ASB14A6NK59 587 aa10.66□□□□□ -0.7
VNN3-212ENST00000519686 TOP1P11387 765 aaKnown RBP10.66□□□□□ -0.7
VNN3-212ENST00000519686 HAND2P61296 217 aa10.66□□□□□ -0.7
VNN3-212ENST00000519686 GNASQ5JWF2 1037 aa10.66□□□□□ -0.7
VNN3-212ENST00000519686 MFSD6Q6ZSS7 791 aa10.66□□□□□ -0.7
VNN3-212ENST00000519686 SH3RF1Q7Z6J0 888 aa10.66□□□□□ -0.7
VNN3-212ENST00000519686 CHD1LQ86WJ1 897 aa10.66□□□□□ -0.7
VNN3-212ENST00000519686 TRIM43Q96BQ3 446 aaPredicted RBP10.66□□□□□ -0.7
VNN3-212ENST00000519686 RNF41Q9H4P4 317 aaPredicted RBP10.66□□□□□ -0.7
VNN3-212ENST00000519686 A1CFQ9NQ94 594 aaKnown RBP10.66□□□□□ -0.7
VNN3-212ENST00000519686 DIAPH3Q9NSV4 1193 aa10.66□□□□□ -0.7
VNN3-212ENST00000519686 TMEM39AQ9NV64 488 aa10.66□□□□□ -0.7
VNN3-212ENST00000519686 ARIH1Q9Y4X5 557 aaPredicted RBP10.66□□□□□ -0.7
VNN3-212ENST00000519686 ZNF536O15090 1300 aa10.66□□□□□ -0.7
VNN3-212ENST00000519686 MROH7Q68CQ1 1323 aa10.66□□□□□ -0.7
VNN3-212ENST00000519686 MCM3APO60318 1980 aa10.66□□□□□ -0.7
VNN3-212ENST00000519686 ICAM1P05362 532 aa10.65□□□□□ -0.7
VNN3-212ENST00000519686 ASGR1P07306 291 aa10.65□□□□□ -0.7
VNN3-212ENST00000519686 FGRP09769 529 aa10.65□□□□□ -0.7
VNN3-212ENST00000519686 PCP11498 1178 aaKnown RBP10.65□□□□□ -0.7
VNN3-212ENST00000519686 SDSP20132 328 aa10.65□□□□□ -0.7
VNN3-212ENST00000519686 CST5P28325 142 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms