RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 OR52Z1P0C646 297 aa12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 NAPAP54920 295 aa12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 HNRNPH2P55795 449 aaKnown RBP12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 ST5P78524 1137 aa12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 PDE4DQ08499 809 aa12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 NONOQ15233 471 aaKnown RBP eCLIP12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 SOGA3Q5TF21 947 aa12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 TTI2Q6NXR4 508 aa12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 CNNM4Q6P4Q7 775 aa12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 TRAPPC11Q7Z392 1133 aa12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 PLIN2Q99541 437 aa12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 ZMYND12Q9H0C1 365 aa12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 MKRN1Q9UHC7 482 aaKnown RBP12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 NARFQ9UHQ1 456 aa12.69□□□□□ -0.38
NUDCD1-203ENST00000519607 SPATA31A5Q5VU36 1347 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 SPATA31A7Q8IWB4 1347 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 PALM3A6NDB9 673 aaPredicted RBP12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 PP2D1A8MPX8 630 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 B4DLN1 442 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 KLRF2D3W0D1 207 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 CCNT1O60563 726 aaKnown RBP12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 MTIF2P46199 727 aaKnown RBP12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 PMS1P54277 932 aaKnown RBP12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 ZBED6P86452 979 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 ORC2Q13416 577 aaPredicted RBP12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 MEA1Q16626 185 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 IQCEQ6IPM2 695 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 TYW1BQ6NUM6 668 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 JAKMIP2Q96AA8 810 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 DYNLL2Q96FJ2 89 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 CALML4Q96GE6 196 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 ANKIB1Q9P2G1 1089 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 SEC63Q9UGP8 760 aaKnown RBP12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 AHDC1Q5TGY3 1603 aaPredicted RBP12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 USP17L3A6NCW0 530 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 USP17L4A6NCW7 530 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 KCNQ2O43526 872 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 PLCG1P19174 1290 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 PPP4CP60510 307 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 VSNL1P62760 191 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 ASIC1P78348 528 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 CASP8Q14790 479 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 NCAPH2Q6IBW4 605 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 CCDC70Q6NSX1 233 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 USP17L1Q7RTZ2 530 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 NEK11Q8NG66 645 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 RRP36Q96EU6 259 aaKnown RBP12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 C7orf25Q9BPX7 421 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 TMEM47Q9BQJ4 181 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 NOC4LQ9BVI4 516 aaKnown RBP12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 SPZ1Q9BXG8 430 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 TSGA10Q9BZW7 698 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 VPS18Q9P253 973 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 MTMR7Q9Y216 660 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 LEMD3Q9Y2U8 911 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 REXO2Q9Y3B8 237 aaKnown RBP12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 NRAPQ86VF7 1730 aa12.68□□□□□ -0.38
NUDCD1-203ENST00000519607 EIF3CLB5ME19 914 aaKnown RBP12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 FGFR1OPO95684 399 aaKnown RBP12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 LMAN1P49257 510 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 SPA17Q15506 151 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 LETM2Q2VYF4 491 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 MUM1L1Q5H9M0 696 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 PAPD7Q5XG87 772 aaKnown RBP12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 WDR59Q6PJI9 974 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 NEK8Q86SG6 692 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 SH3RF3Q8TEJ3 882 aaPredicted RBP12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 CNOT6LQ96LI5 555 aaKnown RBP12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 EIF3CQ99613 913 aaKnown RBP12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 TRIM9Q9C026 710 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 MED4Q9NPJ6 270 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 JAG2Q9Y219 1238 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 NAV1Q8NEY1 1877 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 ANO9A1A5B4 782 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 SMCO2A6NFE2 343 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 H3BQF6 201 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 CYTH3O43739 400 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 SMARCA1P28370 1054 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 CDK17Q00537 523 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 KIF5AQ12840 1032 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 TXNRD1Q16881 649 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 FIGNQ5HY92 759 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 RC3H1Q5TC82 1133 aaKnown RBP12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 LEKR1Q6ZMV7 388 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 ZNF804AQ7Z570 1209 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 GOLGA6L1Q8N7Z2 621 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 GOLGA5Q8TBA6 731 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 FAM71BQ8TC56 605 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 TGFBRAP1Q8WUH2 860 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 CCDC102AQ96A19 550 aa12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 NHEJ1Q9H9Q4 299 aaPredicted RBP12.67□□□□□ -0.38
NUDCD1-203ENST00000519607 A0A1W2PQJ5 194 aa12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 TARSL2A2RTX5 802 aaKnown RBP12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 NUTM2BA6NNL0 878 aaPredicted RBP12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 NUTM2EB1AL46 878 aaPredicted RBP12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 USO1O60763 962 aaKnown RBP12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 RPS6KA4O75676 772 aa12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 HOXA7P31268 230 aaPredicted RBP12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 USP14P54578 494 aa12.66□□□□□ -0.38
NUDCD1-203ENST00000519607 HERVK_113P62684 666 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms