RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 FAM161BQ96MY7 647 aa5.34□□□□□ -1.55
CSMD3-209ENST00000519485 SLC6A18Q96N87 628 aa5.34□□□□□ -1.55
CSMD3-209ENST00000519485 SPATA25Q9BR10 227 aa5.34□□□□□ -1.55
CSMD3-209ENST00000519485 LNPKQ9C0E8 428 aa5.34□□□□□ -1.55
CSMD3-209ENST00000519485 A0A1W2PQ27 194 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 A0A1W2PQ64 194 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 A0A1W2PQC6 194 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 A0A1W2PQD8 194 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 SHOXO15266 292 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 FGF10O15520 208 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-209ENST00000519485 AKAP8O43823 692 aaKnown RBP5.33□□□□□ -1.56
CSMD3-209ENST00000519485 CRKP46108 304 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 INTS3Q68E01 1043 aaKnown RBP5.33□□□□□ -1.56
CSMD3-209ENST00000519485 DNAJC14Q6Y2X3 702 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-209ENST00000519485 B3GNT8Q7Z7M8 397 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 HOMEZQ8IX15 550 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 C7orf61Q8IZ16 206 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 CARFQ8N187 725 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 ZNF526Q8TF50 670 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-209ENST00000519485 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 ANTXR1Q9H6X2 564 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 MRS2Q9HD23 443 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 SUCOQ9UBS9 1254 aaKnown RBP5.33□□□□□ -1.56
CSMD3-209ENST00000519485 FBXL21Q9UKT6 434 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 DCAF1Q9Y4B6 1507 aa5.33□□□□□ -1.56
CSMD3-209ENST00000519485 MEIS1O00470 390 aa5.32□□□□□ -1.56
CSMD3-209ENST00000519485 MATN3O15232 486 aa5.32□□□□□ -1.56
CSMD3-209ENST00000519485 ERCC3P19447 782 aa5.32□□□□□ -1.56
CSMD3-209ENST00000519485 ZXDAP98168 799 aa5.32□□□□□ -1.56
CSMD3-209ENST00000519485 ANKRD39Q53RE8 183 aa5.32□□□□□ -1.56
CSMD3-209ENST00000519485 FERMT3Q86UX7 667 aa5.32□□□□□ -1.56
CSMD3-209ENST00000519485 NAT16Q8N8M0 369 aa5.32□□□□□ -1.56
CSMD3-209ENST00000519485 DHRS1Q96LJ7 313 aa5.32□□□□□ -1.56
CSMD3-209ENST00000519485 SMPD4Q9NXE4 827 aa5.32□□□□□ -1.56
CSMD3-209ENST00000519485 FAN1Q9Y2M0 1017 aa5.32□□□□□ -1.56
CSMD3-209ENST00000519485 HCFC2Q9Y5Z7 792 aa5.32□□□□□ -1.56
CSMD3-209ENST00000519485 DUSP10Q9Y6W6 482 aa5.32□□□□□ -1.56
CSMD3-209ENST00000519485 A0A1B0GTL3 188 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 ASGR2P07307 311 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 ZNF165P49910 485 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 GJA9P57773 515 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 PRR5P85299 388 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 CLCQ05315 142 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 CPZQ66K79 652 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 CWF19L1Q69YN2 538 aaKnown RBP5.31□□□□□ -1.56
CSMD3-209ENST00000519485 JAMLQ86YT9 394 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 ADGRG2Q8IZP9 1017 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 ZNF296Q8WUU4 475 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-209ENST00000519485 CPA5Q8WXQ8 436 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 SMARCC1Q92922 1105 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-209ENST00000519485 TSPAN17Q96FV3 270 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 SAMD11Q96NU1 681 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 DSCC1Q9BVC3 393 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 PLA2G2DQ9UNK4 145 aa5.31□□□□□ -1.56
CSMD3-209ENST00000519485 GSTM1P09488 218 aa5.3□□□□□ -1.56
CSMD3-209ENST00000519485 GLI4P10075 376 aa5.3□□□□□ -1.56
CSMD3-209ENST00000519485 CNR2P34972 360 aa5.3□□□□□ -1.56
CSMD3-209ENST00000519485 NOP2P46087 812 aaKnown RBP5.3□□□□□ -1.56
CSMD3-209ENST00000519485 BICRALQ6AI39 1079 aa5.3□□□□□ -1.56
CSMD3-209ENST00000519485 TAB3Q8N5C8 712 aaPredicted RBP5.3□□□□□ -1.56
CSMD3-209ENST00000519485 SLC9A7Q96T83 725 aa5.3□□□□□ -1.56
CSMD3-209ENST00000519485 PCGF6Q9BYE7 350 aa5.3□□□□□ -1.56
CSMD3-209ENST00000519485 BCL11AQ9H165 835 aa5.3□□□□□ -1.56
CSMD3-209ENST00000519485 COPRSQ9NQ92 184 aa5.3□□□□□ -1.56
CSMD3-209ENST00000519485 VTI1BQ9UEU0 232 aa5.3□□□□□ -1.56
CSMD3-209ENST00000519485 A0A1W2PQJ5 194 aa5.29□□□□□ -1.56
CSMD3-209ENST00000519485 F8W031 263 aaPredicted RBP5.29□□□□□ -1.56
CSMD3-209ENST00000519485 SUV39H1O43463 412 aa5.29□□□□□ -1.56
CSMD3-209ENST00000519485 PMS1P54277 932 aaKnown RBP5.29□□□□□ -1.56
CSMD3-209ENST00000519485 TMCO4Q5TGY1 634 aa5.29□□□□□ -1.56
CSMD3-209ENST00000519485 SLITRK4Q8IW52 837 aa5.29□□□□□ -1.56
CSMD3-209ENST00000519485 PTCHD1Q96NR3 888 aa5.29□□□□□ -1.56
CSMD3-209ENST00000519485 C9IYK1 514 aa5.28□□□□□ -1.56
CSMD3-209ENST00000519485 TBC1D8O95759 1140 aa5.28□□□□□ -1.56
CSMD3-209ENST00000519485 TRIM26Q12899 539 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-209ENST00000519485 SLC9A5Q14940 896 aa5.28□□□□□ -1.56
CSMD3-209ENST00000519485 GK5Q6ZS86 529 aa5.28□□□□□ -1.56
CSMD3-209ENST00000519485 ZNF761Q86XN6 746 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-209ENST00000519485 LINC00482Q8N8I6 264 aa5.28□□□□□ -1.56
CSMD3-209ENST00000519485 BCL2L13Q9BXK5 485 aa5.28□□□□□ -1.56
CSMD3-209ENST00000519485 NTMQ9P121 344 aa5.28□□□□□ -1.56
CSMD3-209ENST00000519485 SRRDQ9UH36 339 aa5.28□□□□□ -1.56
CSMD3-209ENST00000519485 FHOD1Q9Y613 1164 aa5.28□□□□□ -1.56
CSMD3-209ENST00000519485 H0Y8X5 98 aa5.27□□□□□ -1.57
CSMD3-209ENST00000519485 PLATP00750 562 aa5.27□□□□□ -1.57
CSMD3-209ENST00000519485 ZNF20P17024 532 aa5.27□□□□□ -1.57
CSMD3-209ENST00000519485 L1CAMP32004 1257 aa5.27□□□□□ -1.57
CSMD3-209ENST00000519485 MC3RP41968 323 aa5.27□□□□□ -1.57
CSMD3-209ENST00000519485 SARSP49591 514 aaKnown RBP5.27□□□□□ -1.57
CSMD3-209ENST00000519485 ZNF445P59923 1031 aa5.27□□□□□ -1.57
CSMD3-209ENST00000519485 RBM10P98175 930 aaKnown RBP5.27□□□□□ -1.57
CSMD3-209ENST00000519485 TAGLNQ01995 201 aaKnown RBP5.27□□□□□ -1.57
CSMD3-209ENST00000519485 APOBRQ0VD83 1088 aa5.27□□□□□ -1.57
CSMD3-209ENST00000519485 SEZ6Q53EL9 994 aa5.27□□□□□ -1.57
CSMD3-209ENST00000519485 ZNF326Q5BKZ1 582 aaKnown RBP5.27□□□□□ -1.57
CSMD3-209ENST00000519485 CCDC144CPQ8IYA2 1237 aa5.27□□□□□ -1.57
CSMD3-209ENST00000519485 ALG3Q92685 438 aa5.27□□□□□ -1.57
CSMD3-209ENST00000519485 FCRL3Q96P31 734 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-209ENST00000519485 NT5C1AQ9BXI3 368 aa5.27□□□□□ -1.57
CSMD3-209ENST00000519485 GP6Q9HCN6 339 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms