RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 BEX3Q00994 111 aa18.73■□□□□ 0.59
VPS37A-204ENST00000519381 PSRC1Q6PGN9 363 aaPredicted RBP18.73■□□□□ 0.59
VPS37A-204ENST00000519381 EEPD1Q7L9B9 569 aa18.73■□□□□ 0.59
VPS37A-204ENST00000519381 TBX21Q9UL17 535 aa18.73■□□□□ 0.59
VPS37A-204ENST00000519381 ZNF536O15090 1300 aa18.73■□□□□ 0.59
VPS37A-204ENST00000519381 TRIM6-TRIM34B2RNG4 842 aa18.72■□□□□ 0.59
VPS37A-204ENST00000519381 ORC4O43929 436 aa18.72■□□□□ 0.59
VPS37A-204ENST00000519381 FSCN1Q16658 493 aaKnown RBP18.72■□□□□ 0.59
VPS37A-204ENST00000519381 VPS53Q5VIR6 699 aa18.72■□□□□ 0.59
VPS37A-204ENST00000519381 FBXO16Q8IX29 292 aaPredicted RBP18.72■□□□□ 0.59
VPS37A-204ENST00000519381 MPHOSPH6Q99547 160 aaKnown RBP18.72■□□□□ 0.59
VPS37A-204ENST00000519381 TTYH1Q9H313 450 aaPredicted RBP18.72■□□□□ 0.59
VPS37A-204ENST00000519381 CYP39A1Q9NYL5 469 aa18.72■□□□□ 0.59
VPS37A-204ENST00000519381 ADD3Q9UEY8 706 aaKnown RBP18.72■□□□□ 0.59
VPS37A-204ENST00000519381 ANAPC4Q9UJX5 808 aa18.72■□□□□ 0.59
VPS37A-204ENST00000519381 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.71■□□□□ 0.59
VPS37A-204ENST00000519381 PTPDC1A2A3K4 754 aa18.71■□□□□ 0.59
VPS37A-204ENST00000519381 SOWAHBA6NEL2 793 aa18.71■□□□□ 0.59
VPS37A-204ENST00000519381 DYNC1LI2O43237 492 aaPredicted RBP18.71■□□□□ 0.59
VPS37A-204ENST00000519381 ICAM1P05362 532 aa18.71■□□□□ 0.59
VPS37A-204ENST00000519381 TOP1P11387 765 aaKnown RBP18.71■□□□□ 0.59
VPS37A-204ENST00000519381 MFAP1P55081 439 aaKnown RBP18.71■□□□□ 0.59
VPS37A-204ENST00000519381 MCMDC2Q4G0Z9 681 aa18.71■□□□□ 0.59
VPS37A-204ENST00000519381 MUM1L1Q5H9M0 696 aa18.71■□□□□ 0.59
VPS37A-204ENST00000519381 SYDE2Q5VT97 1194 aa18.71■□□□□ 0.59
VPS37A-204ENST00000519381 CXCL17Q6UXB2 119 aa18.71■□□□□ 0.59
VPS37A-204ENST00000519381 CRBNQ96SW2 442 aa18.71■□□□□ 0.59
VPS37A-204ENST00000519381 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.71■□□□□ 0.59
VPS37A-204ENST00000519381 VTA1Q9NP79 307 aa18.71■□□□□ 0.59
VPS37A-204ENST00000519381 INCENPQ9NQS7 918 aa18.71■□□□□ 0.59
VPS37A-204ENST00000519381 IL17RBQ9NRM6 502 aa18.71■□□□□ 0.59
VPS37A-204ENST00000519381 FRMPD2Q68DX3 1309 aaPredicted RBP18.71■□□□□ 0.59
VPS37A-204ENST00000519381 UNC80Q8N2C7 3258 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 LRRC37A2A6NM11 1700 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 CSF2RAP15509 400 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 SLC16A2P36021 539 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 CDK7P50613 346 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 PDE1AP54750 535 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 IQSEC1Q6DN90 963 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 KIAA1211Q6ZU35 1233 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 RASGRP2Q7LDG7 609 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 FAM126BQ8IXS8 530 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 RILPL2Q969X0 211 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 TIFAQ96CG3 184 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 KATNBL1Q9H079 304 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 HIPK3Q9H422 1215 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 GPCPD1Q9NPB8 672 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 PNMA2Q9UL42 364 aa18.7■□□□□ 0.58
VPS37A-204ENST00000519381 ITGA7Q13683 1181 aa18.69■□□□□ 0.58
VPS37A-204ENST00000519381 ALX1Q15699 326 aa18.69■□□□□ 0.58
VPS37A-204ENST00000519381 COL25A1Q9BXS0 654 aaPredicted RBP18.69■□□□□ 0.58
VPS37A-204ENST00000519381 SEZ6LQ9BYH1 1024 aa18.69■□□□□ 0.58
VPS37A-204ENST00000519381 RANBP17Q9H2T7 1088 aaKnown RBP18.69■□□□□ 0.58
VPS37A-204ENST00000519381 SALL3Q9BXA9 1300 aa18.69■□□□□ 0.58
VPS37A-204ENST00000519381 FOXP2O15409 715 aa18.68■□□□□ 0.58
VPS37A-204ENST00000519381 SMPD1P17405 629 aa18.68■□□□□ 0.58
VPS37A-204ENST00000519381 CYP2C18P33260 490 aa18.68■□□□□ 0.58
VPS37A-204ENST00000519381 HAND2P61296 217 aa18.68■□□□□ 0.58
VPS37A-204ENST00000519381 BRDTQ58F21 947 aaPredicted RBP18.68■□□□□ 0.58
VPS37A-204ENST00000519381 MFSD6Q6ZSS7 791 aa18.68■□□□□ 0.58
VPS37A-204ENST00000519381 FAM227BQ96M60 508 aa18.68■□□□□ 0.58
VPS37A-204ENST00000519381 GAS2L1Q99501 681 aaPredicted RBP18.68■□□□□ 0.58
VPS37A-204ENST00000519381 RNF41Q9H4P4 317 aaPredicted RBP18.68■□□□□ 0.58
VPS37A-204ENST00000519381 ZNF576Q9H609 170 aa18.68■□□□□ 0.58
VPS37A-204ENST00000519381 GPHNQ9NQX3 736 aaPredicted RBP18.68■□□□□ 0.58
VPS37A-204ENST00000519381 GNEQ9Y223 722 aaKnown RBP18.68■□□□□ 0.58
VPS37A-204ENST00000519381 CCDC171Q6TFL3 1326 aa18.68■□□□□ 0.58
VPS37A-204ENST00000519381 RAD50Q92878 1312 aa18.68■□□□□ 0.58
VPS37A-204ENST00000519381 A0A0D9SFI3 127 aa18.67■□□□□ 0.58
VPS37A-204ENST00000519381 FGAP02671 866 aa18.67■□□□□ 0.58
VPS37A-204ENST00000519381 ACRP10323 421 aa18.67■□□□□ 0.58
VPS37A-204ENST00000519381 PCP11498 1178 aaKnown RBP18.67■□□□□ 0.58
VPS37A-204ENST00000519381 CALML3P27482 149 aa18.67■□□□□ 0.58
VPS37A-204ENST00000519381 NKX3-2P78367 333 aa18.67■□□□□ 0.58
VPS37A-204ENST00000519381 HDAC1Q13547 482 aaPredicted RBP18.67■□□□□ 0.58
VPS37A-204ENST00000519381 BAATQ14032 418 aaPredicted RBP18.67■□□□□ 0.58
VPS37A-204ENST00000519381 TMEM240Q5SV17 173 aa18.67■□□□□ 0.58
VPS37A-204ENST00000519381 TMEM47Q9BQJ4 181 aa18.67■□□□□ 0.58
VPS37A-204ENST00000519381 PDGFCQ9NRA1 345 aa18.67■□□□□ 0.58
VPS37A-204ENST00000519381 MSRAQ9UJ68 235 aa18.67■□□□□ 0.58
VPS37A-204ENST00000519381 Q9Y3F1 56 aa18.67■□□□□ 0.58
VPS37A-204ENST00000519381 ASTN1O14525 1302 aa18.67■□□□□ 0.58
VPS37A-204ENST00000519381 B4DLN1 442 aa18.66■□□□□ 0.58
VPS37A-204ENST00000519381 HSPD1P10809 573 aaKnown RBP18.66■□□□□ 0.58
VPS37A-204ENST00000519381 CPT1AP50416 773 aa18.66■□□□□ 0.58
VPS37A-204ENST00000519381 ALDH5A1P51649 535 aaPredicted RBP18.66■□□□□ 0.58
VPS37A-204ENST00000519381 MRPL12P52815 198 aaKnown RBP18.66■□□□□ 0.58
VPS37A-204ENST00000519381 PDE4DQ08499 809 aa18.66■□□□□ 0.58
VPS37A-204ENST00000519381 NMIQ13287 307 aaPredicted RBP18.66■□□□□ 0.58
VPS37A-204ENST00000519381 RAB30Q15771 203 aa18.66■□□□□ 0.58
VPS37A-204ENST00000519381 TTBK2Q6IQ55 1244 aa18.66■□□□□ 0.58
VPS37A-204ENST00000519381 ZNF365Q70YC5 407 aa18.66■□□□□ 0.58
VPS37A-204ENST00000519381 TICAM2Q86XR7 235 aa18.66■□□□□ 0.58
VPS37A-204ENST00000519381 LNPKQ9C0E8 428 aa18.66■□□□□ 0.58
VPS37A-204ENST00000519381 IL23AQ9NPF7 189 aa18.66■□□□□ 0.58
VPS37A-204ENST00000519381 POLR3EQ9NVU0 708 aa18.66■□□□□ 0.58
VPS37A-204ENST00000519381 DDX49Q9Y6V7 483 aaKnown RBP18.66■□□□□ 0.58
VPS37A-204ENST00000519381 ZMYM6O95789 1325 aa18.66■□□□□ 0.58
VPS37A-204ENST00000519381 LOC102724159A0A0B4J2E5 919 aa18.65■□□□□ 0.58
VPS37A-204ENST00000519381 CTAGE5O15320 804 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms