RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 USH1GQ495M9 461 aa14.11□□□□□ -0.15
SPIDR-209ENST00000519141 LRSAM1Q6UWE0 723 aa14.11□□□□□ -0.15
SPIDR-209ENST00000519141 FERMT2Q96AC1 680 aa14.11□□□□□ -0.15
SPIDR-209ENST00000519141 CDCA5Q96FF9 252 aa14.11□□□□□ -0.15
SPIDR-209ENST00000519141 CLIC6Q96NY7 704 aa14.11□□□□□ -0.15
SPIDR-209ENST00000519141 TNMDQ9H2S6 317 aa14.11□□□□□ -0.15
SPIDR-209ENST00000519141 RANBP17Q9H2T7 1088 aaKnown RBP14.11□□□□□ -0.15
SPIDR-209ENST00000519141 TMEM260Q9NX78 707 aa14.11□□□□□ -0.15
SPIDR-209ENST00000519141 SRPRBQ9Y5M8 271 aaKnown RBP14.11□□□□□ -0.15
SPIDR-209ENST00000519141 PARP14Q460N5 1801 aa14.11□□□□□ -0.15
SPIDR-209ENST00000519141 TMEM88BA6NKF7 163 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 PFKFB1P16118 471 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 VCAM1P19320 739 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 IREB2P48200 963 aaKnown RBP14.1□□□□□ -0.15
SPIDR-209ENST00000519141 BACE1P56817 501 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 MAP3K9P80192 1104 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 ATP2C1P98194 919 aaPredicted RBP14.1□□□□□ -0.15
SPIDR-209ENST00000519141 PTGDRQ13258 359 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 UBE2SQ16763 222 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 RESP18Q5W5W9 173 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 SHC4Q6S5L8 630 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
SPIDR-209ENST00000519141 DLK2Q6UY11 383 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 NEK8Q86SG6 692 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 ENGASEQ8NFI3 743 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 SLF1Q9BQI6 1058 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 TANGO6Q9C0B7 1094 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 EMILIN3Q9NT22 766 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 FBXO28Q9NVF7 368 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 CSADQ9Y600 493 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 ZHX2Q9Y6X8 837 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 CLK2P49760 499 aaKnown RBP14.1□□□□□ -0.15
SPIDR-209ENST00000519141 NDUFA8P51970 172 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 FMR1Q06787 632 aaKnown RBP eCLIP14.1□□□□□ -0.15
SPIDR-209ENST00000519141 SNW1Q13573 536 aaKnown RBP14.1□□□□□ -0.15
SPIDR-209ENST00000519141 CAMK4Q16566 473 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 MAP3K11Q16584 847 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 CCDC174Q6PII3 467 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 FMR1NBQ8N0W7 255 aaPredicted RBP14.1□□□□□ -0.15
SPIDR-209ENST00000519141 ZNF579Q8NAF0 562 aaKnown RBP14.1□□□□□ -0.15
SPIDR-209ENST00000519141 TBCKQ8TEA7 893 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 MRVI1Q9Y6F6 885 aa14.1□□□□□ -0.15
SPIDR-209ENST00000519141 MYH7BA7E2Y1 1941 aa14.09□□□□□ -0.15
SPIDR-209ENST00000519141 FSD2A1L4K1 749 aa14.09□□□□□ -0.15
SPIDR-209ENST00000519141 C19orf81C9J6K1 198 aa14.09□□□□□ -0.15
SPIDR-209ENST00000519141 CTAGE5O15320 804 aa14.09□□□□□ -0.15
SPIDR-209ENST00000519141 ORC2Q13416 577 aaPredicted RBP14.09□□□□□ -0.15
SPIDR-209ENST00000519141 VGLL4Q14135 290 aa14.09□□□□□ -0.15
SPIDR-209ENST00000519141 LETM2Q2VYF4 491 aa14.09□□□□□ -0.15
SPIDR-209ENST00000519141 MCTP2Q6DN12 878 aa14.09□□□□□ -0.15
SPIDR-209ENST00000519141 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.09□□□□□ -0.15
SPIDR-209ENST00000519141 PRPF38AQ8NAV1 312 aaKnown RBP14.09□□□□□ -0.15
SPIDR-209ENST00000519141 C12orf42Q96LP6 360 aa14.09□□□□□ -0.15
SPIDR-209ENST00000519141 RPAP3Q9H6T3 665 aaPredicted RBP14.09□□□□□ -0.15
SPIDR-209ENST00000519141 FAM13BQ9NYF5 915 aa14.09□□□□□ -0.15
SPIDR-209ENST00000519141 SNCAIPQ9Y6H5 919 aa14.09□□□□□ -0.15
SPIDR-209ENST00000519141 PTPRFP10586 1907 aa14.09□□□□□ -0.15
SPIDR-209ENST00000519141 FAM237AA0A1B0GTK4 181 aa14.08□□□□□ -0.16
SPIDR-209ENST00000519141 LAD1O00515 517 aa14.08□□□□□ -0.16
SPIDR-209ENST00000519141 SYKP43405 635 aa14.08□□□□□ -0.16
SPIDR-209ENST00000519141 HMGCS2P54868 508 aa14.08□□□□□ -0.16
SPIDR-209ENST00000519141 AP3B2Q13367 1082 aa14.08□□□□□ -0.16
SPIDR-209ENST00000519141 DGKZQ13574 1117 aa14.08□□□□□ -0.16
SPIDR-209ENST00000519141 ARL6IP4Q66PJ3 421 aaKnown RBP14.08□□□□□ -0.16
SPIDR-209ENST00000519141 GAS2L3Q86XJ1 694 aa14.08□□□□□ -0.16
SPIDR-209ENST00000519141 TEX2Q8IWB9 1127 aa14.08□□□□□ -0.16
SPIDR-209ENST00000519141 TSPY26PQ9H489 355 aa14.08□□□□□ -0.16
SPIDR-209ENST00000519141 HPSEQ9Y251 543 aa14.08□□□□□ -0.16
SPIDR-209ENST00000519141 SMCHD1A6NHR9 2005 aa14.08□□□□□ -0.16
SPIDR-209ENST00000519141 USP17L15C9J2P7 530 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 USP17L13C9JLJ4 530 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 USP17L11C9JVI0 530 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 USP17L18D6R9N7 530 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 USP17L22D6RA61 530 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 USP17L17D6RBQ6 530 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 USP17L19D6RCP7 530 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 USP17L20D6RJB6 530 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 TRAF5O00463 557 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 CCNT1O60563 726 aaKnown RBP14.07□□□□□ -0.16
SPIDR-209ENST00000519141 FLOT1O75955 427 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 DEKP35659 375 aaKnown RBP14.07□□□□□ -0.16
SPIDR-209ENST00000519141 GRIN1Q05586 938 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 USP17L24Q0WX57 530 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 TTLL12Q14166 644 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-209ENST00000519141 L1TD1Q5T7N2 865 aaKnown RBP14.07□□□□□ -0.16
SPIDR-209ENST00000519141 USP17L6PQ6QN14 398 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 CSRNP2Q9H175 543 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 TMOD4Q9NZQ9 345 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 RBBP6Q7Z6E9 1792 aaKnown RBP14.07□□□□□ -0.16
SPIDR-209ENST00000519141 ABCB11O95342 1321 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 VWA3AA6NCI4 1184 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 NEMFO60524 1076 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 ZNF202O95125 648 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 ICAM1P05362 532 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 TAL1P17542 331 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-209ENST00000519141 CST9Q5W186 159 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 RBM43Q6ZSC3 357 aaKnown RBP14.07□□□□□ -0.16
SPIDR-209ENST00000519141 ANO3Q9BYT9 981 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-209ENST00000519141 KCNH3Q9ULD8 1083 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms