RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 ATXN7O15265 892 aaPredicted RBP8.8□□□□□ -1
CLK4-202ENST00000519132 CPB1P15086 417 aa8.8□□□□□ -1
CLK4-202ENST00000519132 BDNFP23560 247 aa8.8□□□□□ -1
CLK4-202ENST00000519132 DGKHQ86XP1 1220 aa8.8□□□□□ -1
CLK4-202ENST00000519132 BSNDQ8WZ55 320 aa8.8□□□□□ -1
CLK4-202ENST00000519132 CHMP4CQ96CF2 233 aa8.8□□□□□ -1
CLK4-202ENST00000519132 SLC6A18Q96N87 628 aa8.8□□□□□ -1
CLK4-202ENST00000519132 FMN2Q9NZ56 1722 aa8.8□□□□□ -1
CLK4-202ENST00000519132 NBNO60934 754 aa8.8□□□□□ -1
CLK4-202ENST00000519132 PRKD3O94806 890 aa8.8□□□□□ -1
CLK4-202ENST00000519132 ESRRAP11474 423 aaPredicted RBP8.8□□□□□ -1
CLK4-202ENST00000519132 SOX18P35713 384 aa8.8□□□□□ -1
CLK4-202ENST00000519132 WAPLQ7Z5K2 1190 aa8.8□□□□□ -1
CLK4-202ENST00000519132 ZNF227Q86WZ6 799 aa8.8□□□□□ -1
CLK4-202ENST00000519132 SPICE1Q8N0Z3 855 aa8.8□□□□□ -1
CLK4-202ENST00000519132 SNIP1Q8TAD8 396 aaKnown RBP8.8□□□□□ -1
CLK4-202ENST00000519132 DNMT3LQ9UJW3 386 aa8.8□□□□□ -1
CLK4-202ENST00000519132 RFPL3O75679 317 aa8.8□□□□□ -1
CLK4-202ENST00000519132 KCNA6P17658 529 aa8.8□□□□□ -1
CLK4-202ENST00000519132 PCBP2Q15366 365 aaKnown RBP eCLIP8.8□□□□□ -1
CLK4-202ENST00000519132 EGFL6Q8IUX8 553 aa8.8□□□□□ -1
CLK4-202ENST00000519132 TMX1Q9H3N1 280 aa8.8□□□□□ -1
CLK4-202ENST00000519132 KTN1Q86UP2 1357 aaKnown RBP8.8□□□□□ -1
CLK4-202ENST00000519132 MYBL2P10244 700 aa8.79□□□□□ -1
CLK4-202ENST00000519132 FAM83BQ5T0W9 1011 aa8.79□□□□□ -1
CLK4-202ENST00000519132 SYDE2Q5VT97 1194 aa8.79□□□□□ -1
CLK4-202ENST00000519132 ZNF214Q9UL59 606 aaPredicted RBP8.79□□□□□ -1
CLK4-202ENST00000519132 AKAP12Q02952 1782 aa8.79□□□□□ -1
CLK4-202ENST00000519132 HSP90AA1P07900 732 aaKnown RBP8.79□□□□□ -1
CLK4-202ENST00000519132 TNP2Q05952 138 aa8.79□□□□□ -1
CLK4-202ENST00000519132 INO80DQ53TQ3 878 aaPredicted RBP8.79□□□□□ -1
CLK4-202ENST00000519132 HAUS7Q99871 368 aa8.79□□□□□ -1
CLK4-202ENST00000519132 PHAXQ9H814 394 aaKnown RBP8.79□□□□□ -1
CLK4-202ENST00000519132 ATP7BP35670 1465 aa8.79□□□□□ -1
CLK4-202ENST00000519132 NPC1L1Q9UHC9 1359 aa8.78□□□□□ -1
CLK4-202ENST00000519132 IFIT2P09913 472 aaKnown RBP8.78□□□□□ -1
CLK4-202ENST00000519132 PF4V1P10720 104 aa8.78□□□□□ -1
CLK4-202ENST00000519132 PABPC1P11940 636 aaKnown RBP8.78□□□□□ -1
CLK4-202ENST00000519132 GRAMD1BQ3KR37 738 aa8.78□□□□□ -1
CLK4-202ENST00000519132 PI4K2BQ8TCG2 481 aa8.78□□□□□ -1
CLK4-202ENST00000519132 TRIM44Q96DX7 344 aaPredicted RBP8.78□□□□□ -1
CLK4-202ENST00000519132 CARD10Q9BWT7 1032 aa8.78□□□□□ -1
CLK4-202ENST00000519132 NCOA3Q9Y6Q9 1424 aa8.78□□□□□ -1
CLK4-202ENST00000519132 CAPN5O15484 640 aaPredicted RBP8.78□□□□□ -1
CLK4-202ENST00000519132 GSTP1P09211 210 aaKnown RBP8.78□□□□□ -1
CLK4-202ENST00000519132 HSPA2P54652 639 aa8.78□□□□□ -1
CLK4-202ENST00000519132 FNDC3BQ53EP0 1204 aaKnown RBP8.78□□□□□ -1
CLK4-202ENST00000519132 RINLQ6ZS11 566 aa8.78□□□□□ -1
CLK4-202ENST00000519132 EPM2AIP1Q7L775 607 aaPredicted RBP8.78□□□□□ -1
CLK4-202ENST00000519132 ACSF2Q96CM8 615 aaPredicted RBP8.78□□□□□ -1
CLK4-202ENST00000519132 KLF15Q9UIH9 416 aa8.78□□□□□ -1
CLK4-202ENST00000519132 MON2Q7Z3U7 1717 aa8.78□□□□□ -1
CLK4-202ENST00000519132 ANP32CO43423 234 aa8.78□□□□□ -1
CLK4-202ENST00000519132 NCAPHQ15003 741 aa8.78□□□□□ -1
CLK4-202ENST00000519132 FAM43AQ8N2R8 423 aa8.78□□□□□ -1
CLK4-202ENST00000519132 CCDC86Q9H6F5 360 aaKnown RBP8.78□□□□□ -1
CLK4-202ENST00000519132 SOX13Q9UN79 622 aa8.78□□□□□ -1
CLK4-202ENST00000519132 ANKRD36BQ8N2N9 1353 aa8.77□□□□□ -1
CLK4-202ENST00000519132 TRAV20A0A0B4J274 112 aa8.77□□□□□ -1.01
CLK4-202ENST00000519132 SOX1O00570 391 aaPredicted RBP8.77□□□□□ -1.01
CLK4-202ENST00000519132 GDF6Q6KF10 455 aaPredicted RBP8.77□□□□□ -1.01
CLK4-202ENST00000519132 PASD1Q8IV76 773 aa8.77□□□□□ -1.01
CLK4-202ENST00000519132 AARSD1Q9BTE6 412 aaKnown RBP8.77□□□□□ -1.01
CLK4-202ENST00000519132 CDK19Q9BWU1 502 aa8.77□□□□□ -1.01
CLK4-202ENST00000519132 MS4A5Q9H3V2 200 aa8.77□□□□□ -1.01
CLK4-202ENST00000519132 PRR36Q9H6K5 1346 aa8.77□□□□□ -1.01
CLK4-202ENST00000519132 ANKRD26Q9UPS8 1709 aa8.77□□□□□ -1.01
CLK4-202ENST00000519132 RGPD8O14715 1765 aaPredicted RBP8.77□□□□□ -1.01
CLK4-202ENST00000519132 ADGRL3Q9HAR2 1447 aa8.77□□□□□ -1.01
CLK4-202ENST00000519132 VGLL3A8MV65 326 aa8.77□□□□□ -1.01
CLK4-202ENST00000519132 F11P03951 625 aa8.77□□□□□ -1.01
CLK4-202ENST00000519132 CC2D1BQ5T0F9 858 aaKnown RBP8.77□□□□□ -1.01
CLK4-202ENST00000519132 PIK3R6Q5UE93 754 aa8.77□□□□□ -1.01
CLK4-202ENST00000519132 NSMFQ6X4W1 530 aa8.77□□□□□ -1.01
CLK4-202ENST00000519132 CNNM2Q9H8M5 875 aa8.77□□□□□ -1.01
CLK4-202ENST00000519132 PANK3Q9H999 370 aa8.77□□□□□ -1.01
CLK4-202ENST00000519132 XIRP1Q702N8 1843 aaKnown RBP8.77□□□□□ -1.01
CLK4-202ENST00000519132 ANKARQ7Z5J8 1434 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 CD163L1Q9NR16 1453 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 COBLL1Q53SF7 1204 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 XRRA1Q6P2D8 792 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 UBE3DQ7Z6J8 389 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 MORC1Q86VD1 984 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 BTN2A2Q8WVV5 523 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 RELTQ969Z4 430 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 FGAP02671 866 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 CT47B1P0C2W7 299 aaPredicted RBP8.76□□□□□ -1.01
CLK4-202ENST00000519132 ADCYAP1R1P41586 468 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 POTEGQ6S5H5 508 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 ZNF513Q8N8E2 541 aaPredicted RBP8.76□□□□□ -1.01
CLK4-202ENST00000519132 H2AFY2Q9P0M6 372 aaPredicted RBP8.76□□□□□ -1.01
CLK4-202ENST00000519132 PCDHA9Q9Y5H5 950 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 NKG7Q16617 165 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 SAMD5Q5TGI4 173 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 MYRIPQ8NFW9 859 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 PRKRIP1Q9H875 184 aaPredicted RBP8.76□□□□□ -1.01
CLK4-202ENST00000519132 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.76□□□□□ -1.01
CLK4-202ENST00000519132 TACC3Q9Y6A5 838 aa8.76□□□□□ -1.01
CLK4-202ENST00000519132 CCER2I3L3R5 266 aa8.75□□□□□ -1.01
CLK4-202ENST00000519132 LIG1P18858 919 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms