RNA–Protein interactions for RNA: ENST00000518985.1

PCM1-211, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-211ENST00000518985 ST8SIA5O15466 376 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 TOMM70O94826 608 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 NCLP19338 710 aaKnown RBP8.68□□□□□ -1.02
PCM1-211ENST00000518985 ETFBP38117 255 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 CRKP46108 304 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 APOBRQ0VD83 1088 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 SDE2Q6IQ49 451 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 DPP8Q6V1X1 898 aaPredicted RBP8.68□□□□□ -1.02
PCM1-211ENST00000518985 TBC1D16Q8TBP0 767 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 KIFC2Q96AC6 838 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 SUCLG2Q96I99 432 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 MUC3BQ9H195 1237 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 VPS33BQ9H267 617 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 TMEM39AQ9NV64 488 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 GPN3Q9UHW5 284 aaPredicted RBP8.68□□□□□ -1.02
PCM1-211ENST00000518985 NOB1Q9ULX3 412 aaKnown RBP8.68□□□□□ -1.02
PCM1-211ENST00000518985 ZBED9Q6R2W3 1325 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 IRS2Q9Y4H2 1338 aa8.68□□□□□ -1.02
PCM1-211ENST00000518985 PPIP5K2O43314 1243 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 KLF4O43474 513 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 GFRA3O60609 400 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 BCAR3O75815 825 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 GHRHP01286 108 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 VEGFAP15692 232 aaPredicted RBP8.67□□□□□ -1.02
PCM1-211ENST00000518985 MLLT1Q03111 559 aaPredicted RBP8.67□□□□□ -1.02
PCM1-211ENST00000518985 CXCL9Q07325 125 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 RABL6Q3YEC7 729 aaPredicted RBP8.67□□□□□ -1.02
PCM1-211ENST00000518985 SLC4A10Q6U841 1118 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 ANKRD44Q8N8A2 993 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 BSNDQ8WZ55 320 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 NKD1Q969G9 470 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 POP1Q99575 1024 aaKnown RBP8.67□□□□□ -1.02
PCM1-211ENST00000518985 RBSNQ9H1K0 784 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 CLEC4MQ9H2X3 399 aaPredicted RBP8.67□□□□□ -1.02
PCM1-211ENST00000518985 SENP2Q9HC62 589 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 SMC4Q9NTJ3 1288 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 BSDC1Q9NW68 430 aaPredicted RBP8.67□□□□□ -1.02
PCM1-211ENST00000518985 DNAJB12Q9NXW2 375 aaKnown RBP8.67□□□□□ -1.02
PCM1-211ENST00000518985 MINPP1Q9UNW1 487 aa8.67□□□□□ -1.02
PCM1-211ENST00000518985 NSFL1CQ9UNZ2 370 aaKnown RBP8.67□□□□□ -1.02
PCM1-211ENST00000518985 K7ELQ4 463 aaPredicted RBP8.66□□□□□ -1.02
PCM1-211ENST00000518985 SNAP23O00161 211 aa8.66□□□□□ -1.02
PCM1-211ENST00000518985 SIN3BO75182 1162 aa8.66□□□□□ -1.02
PCM1-211ENST00000518985 PPP2R3AQ06190 1150 aa8.66□□□□□ -1.02
PCM1-211ENST00000518985 ZNF468Q5VIY5 522 aaPredicted RBP8.66□□□□□ -1.02
PCM1-211ENST00000518985 LMBR1LQ6UX01 489 aa8.66□□□□□ -1.02
PCM1-211ENST00000518985 HFE2Q6ZVN8 426 aa8.66□□□□□ -1.02
PCM1-211ENST00000518985 ANKS3Q6ZW76 656 aa8.66□□□□□ -1.02
PCM1-211ENST00000518985 TXNRD3Q86VQ6 643 aa8.66□□□□□ -1.02
PCM1-211ENST00000518985 TAF1DQ9H5J8 278 aaPredicted RBP8.66□□□□□ -1.02
PCM1-211ENST00000518985 SIRPGQ9P1W8 387 aa8.66□□□□□ -1.02
PCM1-211ENST00000518985 DACH1Q9UI36 760 aa8.66□□□□□ -1.02
PCM1-211ENST00000518985 SAMM50Q9Y512 469 aa8.66□□□□□ -1.02
PCM1-211ENST00000518985 MRVI1Q9Y6F6 885 aa8.66□□□□□ -1.02
PCM1-211ENST00000518985 PCNTO95613 3336 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 POLR2AP24928 1970 aaKnown RBP8.65□□□□□ -1.02
PCM1-211ENST00000518985 SHTN1A0MZ66 631 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 ANKRD62A6NC57 917 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 SMNDC1O75940 238 aaKnown RBP eCLIP8.65□□□□□ -1.02
PCM1-211ENST00000518985 B3GALT4O96024 378 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 TRIM27P14373 513 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 KLRK1P26718 216 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 CTBSQ01459 385 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 RAB33AQ14088 237 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 SYT9Q86SS6 491 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 JAZF1Q86VZ6 243 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 ANKRD18AQ8IVF6 992 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 GPC2Q8N158 579 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 GATAD2BQ8WXI9 593 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 MRFAP1L1Q96HT8 127 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 TRERF1Q96PN7 1200 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 CDC5LQ99459 802 aaKnown RBP8.65□□□□□ -1.02
PCM1-211ENST00000518985 SRRTQ9BXP5 876 aaKnown RBP8.65□□□□□ -1.02
PCM1-211ENST00000518985 UBE2OQ9C0C9 1292 aaKnown RBP8.65□□□□□ -1.02
PCM1-211ENST00000518985 BICC1Q9H694 974 aaKnown RBP8.65□□□□□ -1.02
PCM1-211ENST00000518985 PRKAG3Q9UGI9 489 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 PRR12Q9ULL5 1215 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 ZNRF3Q9ULT6 936 aa8.65□□□□□ -1.02
PCM1-211ENST00000518985 XDHP47989 1333 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 RAD17O75943 681 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 F13A1P00488 732 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 EIF2AK2P19525 551 aaKnown RBP8.64□□□□□ -1.03
PCM1-211ENST00000518985 BMP6P22004 513 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 EPS15P42566 896 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 RFX5P48382 616 aaPredicted RBP8.64□□□□□ -1.03
PCM1-211ENST00000518985 MPP2Q14168 576 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 EGFLAMQ63HQ2 1017 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 BNC2Q6ZN30 1099 aaPredicted RBP8.64□□□□□ -1.03
PCM1-211ENST00000518985 NIM1KQ8IY84 436 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 SUPT20HQ8NEM7 779 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 CPLX3Q8WVH0 158 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 JDP2Q8WYK2 163 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 ARHGAP45Q92619 1136 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 TNFRSF25Q93038 417 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 SHDQ96IW2 340 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 TRIM47Q96LD4 638 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 PUS3Q9BZE2 481 aaKnown RBP8.64□□□□□ -1.03
PCM1-211ENST00000518985 MIR1-1HGQ9H1L0 117 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 DBNDD1Q9H9R9 158 aa8.64□□□□□ -1.03
PCM1-211ENST00000518985 AVENQ9NQS1 362 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms