RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 PRPHP41219 470 aa17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 MTMR2Q13614 643 aa17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 CCDC84Q86UT8 332 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 PRPF38AQ8NAV1 312 aaKnown RBP17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 TBCKQ8TEA7 893 aa17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 ZKSCAN4Q969J2 545 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 KIFC2Q96AC6 838 aa17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 CCDC34Q96HJ3 373 aa17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 PYM1Q9BRP8 204 aaKnown RBP17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 TAF1DQ9H5J8 278 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 ABCB11O95342 1321 aa17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 MYH7BA7E2Y1 1941 aa17.13■□□□□ 0.33
TRAPPC9-205ENST00000518839 ADM5C9JUS6 153 aa17.13■□□□□ 0.33
TRAPPC9-205ENST00000518839 ZNF202O95125 648 aa17.13■□□□□ 0.33
TRAPPC9-205ENST00000518839 CCDC192P0DO97 292 aa17.13■□□□□ 0.33
TRAPPC9-205ENST00000518839 SPP2Q13103 211 aa17.13■□□□□ 0.33
TRAPPC9-205ENST00000518839 GAS2L3Q86XJ1 694 aa17.13■□□□□ 0.33
TRAPPC9-205ENST00000518839 ELOA2Q8IYF1 753 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC9-205ENST00000518839 RBM46Q8TBY0 533 aaKnown RBP17.13■□□□□ 0.33
TRAPPC9-205ENST00000518839 CLIC6Q96NY7 704 aa17.13■□□□□ 0.33
TRAPPC9-205ENST00000518839 MRPL11Q9Y3B7 192 aaKnown RBP17.13■□□□□ 0.33
TRAPPC9-205ENST00000518839 CSADQ9Y600 493 aa17.13■□□□□ 0.33
TRAPPC9-205ENST00000518839 GCFC2P16383 781 aaKnown RBP17.12■□□□□ 0.33
TRAPPC9-205ENST00000518839 VCAM1P19320 739 aa17.12■□□□□ 0.33
TRAPPC9-205ENST00000518839 LONP1P36776 959 aaKnown RBP17.12■□□□□ 0.33
TRAPPC9-205ENST00000518839 LETM2Q2VYF4 491 aa17.12■□□□□ 0.33
TRAPPC9-205ENST00000518839 CDCA5Q96FF9 252 aa17.12■□□□□ 0.33
TRAPPC9-205ENST00000518839 SDF4Q9BRK5 362 aa17.12■□□□□ 0.33
TRAPPC9-205ENST00000518839 GRPEL1Q9HAV7 217 aa17.12■□□□□ 0.33
TRAPPC9-205ENST00000518839 EMILIN3Q9NT22 766 aa17.12■□□□□ 0.33
TRAPPC9-205ENST00000518839 TMEM260Q9NX78 707 aa17.12■□□□□ 0.33
TRAPPC9-205ENST00000518839 TMOD4Q9NZQ9 345 aa17.12■□□□□ 0.33
TRAPPC9-205ENST00000518839 HOOK1Q9UJC3 728 aaKnown RBP17.12■□□□□ 0.33
TRAPPC9-205ENST00000518839 KCNH3Q9ULD8 1083 aa17.12■□□□□ 0.33
TRAPPC9-205ENST00000518839 ZHX2Q9Y6X8 837 aa17.12■□□□□ 0.33
TRAPPC9-205ENST00000518839 RBBP6Q7Z6E9 1792 aaKnown RBP17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 PIK3CDO00329 1044 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 WNT7AO00755 349 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 NEMFO60524 1076 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 CCNT1O60563 726 aaKnown RBP17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 CAMK4Q16566 473 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 UBE2SQ16763 222 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 USH1GQ495M9 461 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 PPP4R3AQ6IN85 833 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 SASS6Q6UVJ0 657 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 DTHD1Q6ZMT9 781 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 C4orf32Q8N8J7 132 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 TANGO6Q9C0B7 1094 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 CSRNP2Q9H175 543 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 USP25Q9UHP3 1055 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 PTPRFP10586 1907 aa17.11■□□□□ 0.33
TRAPPC9-205ENST00000518839 SPDYE3A6NKU9 549 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 ICAM1P05362 532 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 OR52Z1P0C646 297 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 TXLNAP40222 546 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 USP11P51784 963 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 SNAP25P60880 206 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 EAPPQ56P03 285 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 SH3D19Q5HYK7 790 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 KANK3Q6NY19 840 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 MOXD1Q6UVY6 613 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 ANKRD13AQ8IZ07 590 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 SAMD3Q8N6K7 520 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 FUCA2Q9BTY2 467 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 ANO3Q9BYT9 981 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 RPAP3Q9H6T3 665 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 EHMT1Q9H9B1 1298 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 PPP1R9AQ9ULJ8 1098 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 AFG3L2Q9Y4W6 797 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 CTDP1Q9Y5B0 961 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 SNCAIPQ9Y6H5 919 aa17.1■□□□□ 0.33
TRAPPC9-205ENST00000518839 VWA3AA6NCI4 1184 aa17.09■□□□□ 0.33
TRAPPC9-205ENST00000518839 MEIS2O14770 477 aa17.09■□□□□ 0.33
TRAPPC9-205ENST00000518839 ZBED4O75132 1171 aa17.09■□□□□ 0.33
TRAPPC9-205ENST00000518839 FLOT1O75955 427 aa17.09■□□□□ 0.33
TRAPPC9-205ENST00000518839 CAVIN2O95810 425 aa17.09■□□□□ 0.33
TRAPPC9-205ENST00000518839 VGLL4Q14135 290 aa17.09■□□□□ 0.33
TRAPPC9-205ENST00000518839 CCDC174Q6PII3 467 aa17.09■□□□□ 0.33
TRAPPC9-205ENST00000518839 ARMC9Q7Z3E5 817 aa17.09■□□□□ 0.33
TRAPPC9-205ENST00000518839 AK8Q96MA6 479 aa17.09■□□□□ 0.33
TRAPPC9-205ENST00000518839 FBXO28Q9NVF7 368 aa17.09■□□□□ 0.33
TRAPPC9-205ENST00000518839 MYPNQ86TC9 1320 aa17.09■□□□□ 0.33
TRAPPC9-205ENST00000518839 LOC285556D6RIA3 1793 aa17.08■□□□□ 0.33
TRAPPC9-205ENST00000518839 UNCXA6NJT0 531 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 USP17L15C9J2P7 530 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 USP17L13C9JLJ4 530 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 USP17L11C9JVI0 530 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 USP17L18D6R9N7 530 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 USP17L22D6RA61 530 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 USP17L17D6RBQ6 530 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 USP17L19D6RCP7 530 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 USP17L20D6RJB6 530 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 GRIN1Q05586 938 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 USP17L24Q0WX57 530 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 PRKG1Q13976 671 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 USP17L6PQ6QN14 398 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 KRBA2Q6ZNG9 492 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 LDHDQ86WU2 507 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms