RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 PFKMP08237 780 aa14.74□□□□□ -0.05
TRAPPC9-204ENST00000518723 ATP2A2P16615 1042 aaKnown RBP14.74□□□□□ -0.05
TRAPPC9-204ENST00000518723 TFF2Q03403 129 aa14.74□□□□□ -0.05
TRAPPC9-204ENST00000518723 CEP95Q96GE4 821 aa14.74□□□□□ -0.05
TRAPPC9-204ENST00000518723 AGBL1Q96MI9 1066 aa14.74□□□□□ -0.05
TRAPPC9-204ENST00000518723 ZNF287Q9HBT7 754 aa14.74□□□□□ -0.05
TRAPPC9-204ENST00000518723 HOMER2Q9NSB8 354 aa14.74□□□□□ -0.05
TRAPPC9-204ENST00000518723 PIEZO1Q92508 2521 aa14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 DYNC1LI2O43237 492 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 TTLL1O95922 423 aa14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 BMP3P12645 472 aa14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 MYOGP15173 224 aa14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 SMPD1P17405 629 aa14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 TKFCQ3LXA3 575 aa14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 IQSEC1Q6DN90 963 aa14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 ZNF444Q8N0Y2 327 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 MICALL1Q8N3F8 863 aa14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 RNF146Q9NTX7 359 aa14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 COG6Q9Y2V7 657 aa14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 MTCH2Q9Y6C9 303 aa14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 PLIN4Q96Q06 1357 aa14.73□□□□□ -0.05
TRAPPC9-204ENST00000518723 ZNF536O15090 1300 aa14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 ZBBXA8MT70 800 aa14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 MINDY4BA8MYZ0 360 aa14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 KCNQ1P51787 676 aa14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 STAT2P52630 851 aa14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 TAPT1Q6NXT6 567 aa14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 FAM160B2Q86V87 743 aa14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 STK11IPQ8N1F8 1099 aa14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 LRRC47Q8N1G4 583 aaKnown RBP14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 ALDH8A1Q9H2A2 487 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 ZBTB40Q9NUA8 1239 aa14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 COG5Q9UP83 839 aa14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 PRRC2BQ5JSZ5 2229 aaKnown RBP14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 GBF1Q92538 1859 aa14.72□□□□□ -0.05
TRAPPC9-204ENST00000518723 MYH7P12883 1935 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 TMEM232C9JQI7 657 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 GTPBP6O43824 516 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 PLA2G6O60733 806 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 SUPT20HL2P0C7V6 817 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 MS4A1P11836 297 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 PSMC6P62333 389 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 TTLL4Q14679 1199 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 SKIV2LQ15477 1246 aaKnown RBP14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 TMEM67Q5HYA8 995 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 SLFN13Q68D06 897 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 MORC4Q8TE76 937 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 CHURC1Q8WUH1 139 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 SCLYQ96I15 445 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 GMCL1Q96IK5 515 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 BCL11AQ9H165 835 aa14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 EPB41L4AQ9HCS5 686 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC9-204ENST00000518723 LRRC37A2A6NM11 1700 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 PRDM1O75626 825 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 CA3P07451 260 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 GNAT2P19087 354 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 PTGS1P23219 599 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 NEDD1Q8NHV4 660 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 PHOSPHO2Q8TCD6 241 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 STAG1Q8WVM7 1258 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 APPBP2Q92624 585 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 OSBP2Q969R2 916 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 TRERF1Q96PN7 1200 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 VTA1Q9NP79 307 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 PDGFCQ9NRA1 345 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 CYP39A1Q9NYL5 469 aa14.7□□□□□ -0.06
TRAPPC9-204ENST00000518723 RFC2P35250 354 aa14.69□□□□□ -0.06
TRAPPC9-204ENST00000518723 TDO2P48775 406 aa14.69□□□□□ -0.06
TRAPPC9-204ENST00000518723 FBXO16Q8IX29 292 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC9-204ENST00000518723 KBTBD3Q8NAB2 608 aa14.69□□□□□ -0.06
TRAPPC9-204ENST00000518723 SLC9A7Q96T83 725 aa14.69□□□□□ -0.06
TRAPPC9-204ENST00000518723 LRFN3Q9BTN0 628 aa14.69□□□□□ -0.06
TRAPPC9-204ENST00000518723 POLR3EQ9NVU0 708 aa14.69□□□□□ -0.06
TRAPPC9-204ENST00000518723 DDX19BQ9UMR2 479 aa14.69□□□□□ -0.06
TRAPPC9-204ENST00000518723 HCN4Q9Y3Q4 1203 aa14.69□□□□□ -0.06
TRAPPC9-204ENST00000518723 TNKSO95271 1327 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 MYH4Q9Y623 1939 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 TCF20Q9UGU0 1960 aaKnown RBP14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 EPOPA6NHQ4 379 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 RFXAPO00287 272 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 GPAA1O43292 621 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 TLL1O43897 1013 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 TSPY3P0CV98 308 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 TSPY8P0CW00 308 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 CYP2C9P11712 490 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 ACTN1P12814 892 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 ALAS1P13196 640 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 SLC1A4P43007 532 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 DUSP28Q4G0W2 176 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 TMEM63BQ5T3F8 832 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 EEPD1Q7L9B9 569 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 LRRCC1Q9C099 1032 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 EPHX3Q9H6B9 360 aa14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 TRMT13Q9NUP7 481 aaKnown RBP14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 DDX49Q9Y6V7 483 aaKnown RBP14.68□□□□□ -0.06
TRAPPC9-204ENST00000518723 LOC102724159A0A0B4J2E5 919 aa14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 RNF113AO15541 343 aaKnown RBP14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 ZFYP08048 801 aaPredicted RBP14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 PURAQ00577 322 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms