RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 SPRED3Q2MJR0 410 aa8.18□□□□□ -1.1
CCDC6-203ENST00000518638 CIAPIN1Q6FI81 312 aa8.18□□□□□ -1.1
CCDC6-203ENST00000518638 WNT8BQ93098 351 aa8.18□□□□□ -1.1
CCDC6-203ENST00000518638 OSBPL1AQ9BXW6 950 aa8.18□□□□□ -1.1
CCDC6-203ENST00000518638 RNF208Q9H0X6 261 aa8.18□□□□□ -1.1
CCDC6-203ENST00000518638 TMX4Q9H1E5 349 aaPredicted RBP8.18□□□□□ -1.1
CCDC6-203ENST00000518638 VPS33BQ9H267 617 aa8.18□□□□□ -1.1
CCDC6-203ENST00000518638 AKAP11Q9UKA4 1901 aa8.18□□□□□ -1.1
CCDC6-203ENST00000518638 TRAF5O00463 557 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 GAS2O43903 313 aaKnown RBP8.17□□□□□ -1.1
CCDC6-203ENST00000518638 PRPF40AO75400 957 aaKnown RBP8.17□□□□□ -1.1
CCDC6-203ENST00000518638 EPS15P42566 896 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 PTPN12Q05209 780 aaKnown RBP8.17□□□□□ -1.1
CCDC6-203ENST00000518638 TEFQ10587 303 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 FBLN7Q53RD9 439 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 FDX2Q6P4F2 183 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 ZNF790Q6PG37 636 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 NFXL1Q6ZNB6 911 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 FBXO33Q7Z6M2 555 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 CTU1Q7Z7A3 348 aaKnown RBP8.17□□□□□ -1.1
CCDC6-203ENST00000518638 NIM1KQ8IY84 436 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 ZNF428Q96B54 188 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 BCO2Q9BYV7 579 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 LGR6Q9HBX8 967 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 OSGEPQ9NPF4 335 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 SEC31BQ9NQW1 1179 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 GPRC5DQ9NZD1 345 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 SNED1Q8TER0 1413 aa8.17□□□□□ -1.1
CCDC6-203ENST00000518638 TMEM238LA0A1B0GVL6 79 aa8.16□□□□□ -1.1
CCDC6-203ENST00000518638 MAP4P27816 1152 aaKnown RBP8.16□□□□□ -1.1
CCDC6-203ENST00000518638 RIC1Q4ADV7 1423 aa8.16□□□□□ -1.1
CCDC6-203ENST00000518638 CDC37L1Q7L3B6 337 aa8.16□□□□□ -1.1
CCDC6-203ENST00000518638 FBXL6Q8N531 539 aa8.16□□□□□ -1.1
CCDC6-203ENST00000518638 NYXQ9GZU5 481 aa8.16□□□□□ -1.1
CCDC6-203ENST00000518638 CLEC4MQ9H2X3 399 aaPredicted RBP8.16□□□□□ -1.1
CCDC6-203ENST00000518638 SIPA1L3O60292 1781 aaPredicted RBP8.15□□□□□ -1.1
CCDC6-203ENST00000518638 SOX1O00570 391 aaPredicted RBP8.15□□□□□ -1.1
CCDC6-203ENST00000518638 GIPC1O14908 333 aa8.15□□□□□ -1.1
CCDC6-203ENST00000518638 F13BP05160 661 aa8.15□□□□□ -1.1
CCDC6-203ENST00000518638 ESRRAP11474 423 aaPredicted RBP8.15□□□□□ -1.1
CCDC6-203ENST00000518638 IKBKEQ14164 716 aa8.15□□□□□ -1.1
CCDC6-203ENST00000518638 MORC1Q86VD1 984 aa8.15□□□□□ -1.1
CCDC6-203ENST00000518638 AGBL5Q8NDL9 886 aa8.15□□□□□ -1.1
CCDC6-203ENST00000518638 KLHDC7BQ96G42 594 aa8.15□□□□□ -1.1
CCDC6-203ENST00000518638 ZNF496Q96IT1 587 aaPredicted RBP8.15□□□□□ -1.1
CCDC6-203ENST00000518638 SRCIN1Q9C0H9 1055 aa8.15□□□□□ -1.1
CCDC6-203ENST00000518638 ZNF576Q9H609 170 aa8.15□□□□□ -1.1
CCDC6-203ENST00000518638 SOX17Q9H6I2 414 aaPredicted RBP8.15□□□□□ -1.1
CCDC6-203ENST00000518638 ZNF408Q9H9D4 720 aa8.15□□□□□ -1.1
CCDC6-203ENST00000518638 PGAP2Q9UHJ9 254 aa8.15□□□□□ -1.1
CCDC6-203ENST00000518638 KIF7Q2M1P5 1343 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 IGSF3O75054 1194 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 IL13P35225 146 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 ARL4DP49703 201 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 HUNKP57058 714 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 PCDH1Q08174 1060 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 CRY2Q49AN0 593 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 RGMBQ6NW40 437 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 NXPE4Q6UWF7 544 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 SPOCD1Q6ZMY3 1216 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 SUPT20HQ8NEM7 779 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 RPGRQ92834 1020 aaKnown RBP8.14□□□□□ -1.11
CCDC6-203ENST00000518638 FRMD6Q96NE9 622 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 RUSC1Q9BVN2 902 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 PPP4R2Q9NY27 417 aa8.14□□□□□ -1.11
CCDC6-203ENST00000518638 NIP7Q9Y221 180 aaKnown RBP eCLIP8.14□□□□□ -1.11
CCDC6-203ENST00000518638 IBTKQ9P2D0 1353 aaPredicted RBP8.13□□□□□ -1.11
CCDC6-203ENST00000518638 DBX1A6NMT0 343 aa8.13□□□□□ -1.11
CCDC6-203ENST00000518638 PPIP5K2O43314 1243 aa8.13□□□□□ -1.11
CCDC6-203ENST00000518638 XRCC5P13010 732 aaKnown RBP8.13□□□□□ -1.11
CCDC6-203ENST00000518638 GNA15P30679 374 aa8.13□□□□□ -1.11
CCDC6-203ENST00000518638 RBM25P49756 843 aaKnown RBP8.13□□□□□ -1.11
CCDC6-203ENST00000518638 FCGRTP55899 365 aa8.13□□□□□ -1.11
CCDC6-203ENST00000518638 C19orf57Q0VDD7 668 aa8.13□□□□□ -1.11
CCDC6-203ENST00000518638 RPS26P11Q5JNZ5 115 aaPredicted RBP8.13□□□□□ -1.11
CCDC6-203ENST00000518638 HABP4Q5JVS0 413 aaKnown RBP8.13□□□□□ -1.11
CCDC6-203ENST00000518638 ZNF648Q5T619 568 aaPredicted RBP8.13□□□□□ -1.11
CCDC6-203ENST00000518638 C2orf69Q8N8R5 385 aa8.13□□□□□ -1.11
CCDC6-203ENST00000518638 SLC7A3Q8WY07 619 aa8.13□□□□□ -1.11
CCDC6-203ENST00000518638 DUSP9Q99956 384 aaKnown RBP8.13□□□□□ -1.11
CCDC6-203ENST00000518638 METTL22Q9BUU2 404 aaPredicted RBP8.13□□□□□ -1.11
CCDC6-203ENST00000518638 KRTAP4-5Q9BYR2 181 aa8.13□□□□□ -1.11
CCDC6-203ENST00000518638 GLIS2Q9BZE0 524 aaPredicted RBP8.13□□□□□ -1.11
CCDC6-203ENST00000518638 OSBPL7Q9BZF2 842 aa8.13□□□□□ -1.11
CCDC6-203ENST00000518638 ZFYVE1Q9HBF4 777 aa8.13□□□□□ -1.11
CCDC6-203ENST00000518638 BSDC1Q9NW68 430 aaPredicted RBP8.13□□□□□ -1.11
CCDC6-203ENST00000518638 TNRC18O15417 2968 aaPredicted RBP8.13□□□□□ -1.11
CCDC6-203ENST00000518638 NPC1L1Q9UHC9 1359 aa8.12□□□□□ -1.11
CCDC6-203ENST00000518638 COL4A5P29400 1685 aa8.12□□□□□ -1.11
CCDC6-203ENST00000518638 A1BGP04217 495 aa8.12□□□□□ -1.11
CCDC6-203ENST00000518638 TNIP1Q15025 636 aa8.12□□□□□ -1.11
CCDC6-203ENST00000518638 ZNF423Q2M1K9 1284 aa8.12□□□□□ -1.11
CCDC6-203ENST00000518638 MTHFSDQ2M296 383 aaKnown RBP8.12□□□□□ -1.11
CCDC6-203ENST00000518638 SGO2Q562F6 1265 aa8.12□□□□□ -1.11
CCDC6-203ENST00000518638 HGSNATQ68CP4 663 aa8.12□□□□□ -1.11
CCDC6-203ENST00000518638 OLFM4Q6UX06 510 aa8.12□□□□□ -1.11
CCDC6-203ENST00000518638 DTHD1Q6ZMT9 781 aa8.12□□□□□ -1.11
CCDC6-203ENST00000518638 FLCNQ8NFG4 579 aa8.12□□□□□ -1.11
CCDC6-203ENST00000518638 RBM17Q96I25 401 aaKnown RBP8.12□□□□□ -1.11
CCDC6-203ENST00000518638 BCL2L13Q9BXK5 485 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms