RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 SPC25Q9HBM1 224 aa20.42■□□□□ 0.86
CTNNA1-206ENST00000517980 PDGFCQ9NRA1 345 aa20.42■□□□□ 0.86
CTNNA1-206ENST00000517980 MOXD2PA6NHM9 499 aa20.41■□□□□ 0.86
CTNNA1-206ENST00000517980 DCDC2CA8MYV0 355 aa20.41■□□□□ 0.86
CTNNA1-206ENST00000517980 KIAA0355O15063 1070 aa20.41■□□□□ 0.86
CTNNA1-206ENST00000517980 TOP1P11387 765 aaKnown RBP20.41■□□□□ 0.86
CTNNA1-206ENST00000517980 TNFAIP2Q03169 654 aa20.41■□□□□ 0.86
CTNNA1-206ENST00000517980 TMEM63BQ5T3F8 832 aa20.41■□□□□ 0.86
CTNNA1-206ENST00000517980 UPF3AQ9H1J1 476 aaKnown RBP20.41■□□□□ 0.86
CTNNA1-206ENST00000517980 CYP39A1Q9NYL5 469 aa20.41■□□□□ 0.86
CTNNA1-206ENST00000517980 STXBP5LQ9Y2K9 1186 aa20.41■□□□□ 0.86
CTNNA1-206ENST00000517980 ASTN1O14525 1302 aa20.41■□□□□ 0.86
CTNNA1-206ENST00000517980 CCDC171Q6TFL3 1326 aa20.41■□□□□ 0.86
CTNNA1-206ENST00000517980 CTAGE5O15320 804 aa20.4■□□□□ 0.86
CTNNA1-206ENST00000517980 SYDE2Q5VT97 1194 aa20.4■□□□□ 0.86
CTNNA1-206ENST00000517980 MFSD6Q6ZSS7 791 aa20.4■□□□□ 0.86
CTNNA1-206ENST00000517980 ANKRD33Q7Z3H0 272 aa20.4■□□□□ 0.86
CTNNA1-206ENST00000517980 PCSK9Q8NBP7 692 aaKnown RBP20.4■□□□□ 0.86
CTNNA1-206ENST00000517980 GLT1D1Q96MS3 346 aa20.4■□□□□ 0.86
CTNNA1-206ENST00000517980 ZKSCAN3Q9BRR0 538 aa20.4■□□□□ 0.86
CTNNA1-206ENST00000517980 TCP11L1Q9NUJ3 509 aa20.4■□□□□ 0.86
CTNNA1-206ENST00000517980 ASB14A6NK59 587 aa20.39■□□□□ 0.85
CTNNA1-206ENST00000517980 CST5P28325 142 aaPredicted RBP20.39■□□□□ 0.85
CTNNA1-206ENST00000517980 CDK7P50613 346 aa20.39■□□□□ 0.85
CTNNA1-206ENST00000517980 NUCB1Q02818 461 aa20.39■□□□□ 0.85
CTNNA1-206ENST00000517980 AKNAD1Q5T1N1 836 aa20.39■□□□□ 0.85
CTNNA1-206ENST00000517980 FAM109BQ6ICB4 259 aaPredicted RBP20.39■□□□□ 0.85
CTNNA1-206ENST00000517980 BTNL9Q6UXG8 535 aa20.39■□□□□ 0.85
CTNNA1-206ENST00000517980 TBC1D10CQ8IV04 446 aa20.39■□□□□ 0.85
CTNNA1-206ENST00000517980 TOX2Q96NM4 488 aa20.39■□□□□ 0.85
CTNNA1-206ENST00000517980 GUCD1Q96NT3 240 aa20.39■□□□□ 0.85
CTNNA1-206ENST00000517980 RANBP17Q9H2T7 1088 aaKnown RBP20.39■□□□□ 0.85
CTNNA1-206ENST00000517980 LCTP09848 1927 aa20.39■□□□□ 0.85
CTNNA1-206ENST00000517980 ELP1O95163 1332 aa20.38■□□□□ 0.85
CTNNA1-206ENST00000517980 DYNC1LI2O43237 492 aaPredicted RBP20.38■□□□□ 0.85
CTNNA1-206ENST00000517980 ICAM1P05362 532 aa20.38■□□□□ 0.85
CTNNA1-206ENST00000517980 BAATQ14032 418 aaPredicted RBP20.38■□□□□ 0.85
CTNNA1-206ENST00000517980 CWC27Q6UX04 472 aaKnown RBP20.38■□□□□ 0.85
CTNNA1-206ENST00000517980 ARVCFO00192 962 aa20.37■□□□□ 0.85
CTNNA1-206ENST00000517980 NFIBO00712 420 aa20.37■□□□□ 0.85
CTNNA1-206ENST00000517980 PDHBP11177 359 aa20.37■□□□□ 0.85
CTNNA1-206ENST00000517980 SMPD1P17405 629 aa20.37■□□□□ 0.85
CTNNA1-206ENST00000517980 AAMPQ13685 434 aa20.37■□□□□ 0.85
CTNNA1-206ENST00000517980 TAPT1Q6NXT6 567 aa20.37■□□□□ 0.85
CTNNA1-206ENST00000517980 CXCL17Q6UXB2 119 aa20.37■□□□□ 0.85
CTNNA1-206ENST00000517980 TICAM2Q86XR7 235 aa20.37■□□□□ 0.85
CTNNA1-206ENST00000517980 FBXO16Q8IX29 292 aaPredicted RBP20.37■□□□□ 0.85
CTNNA1-206ENST00000517980 GNEQ9Y223 722 aaKnown RBP20.37■□□□□ 0.85
CTNNA1-206ENST00000517980 DLL1O00548 723 aa20.36■□□□□ 0.85
CTNNA1-206ENST00000517980 ZNF213O14771 459 aa20.36■□□□□ 0.85
CTNNA1-206ENST00000517980 TIMP1P01033 207 aa20.36■□□□□ 0.85
CTNNA1-206ENST00000517980 FPGSQ05932 587 aa20.36■□□□□ 0.85
CTNNA1-206ENST00000517980 ZNF697Q5TEC3 545 aa20.36■□□□□ 0.85
CTNNA1-206ENST00000517980 RNPC3Q96LT9 517 aaKnown RBP20.36■□□□□ 0.85
CTNNA1-206ENST00000517980 TTC14Q96N46 770 aa20.36■□□□□ 0.85
CTNNA1-206ENST00000517980 AP5M1Q9H0R1 490 aa20.36■□□□□ 0.85
CTNNA1-206ENST00000517980 CPVLQ9H3G5 476 aa20.36■□□□□ 0.85
CTNNA1-206ENST00000517980 SEMA6BQ9H3T3 888 aa20.36■□□□□ 0.85
CTNNA1-206ENST00000517980 OSBPL3Q9H4L5 887 aa20.36■□□□□ 0.85
CTNNA1-206ENST00000517980 NEDD4P46934 1319 aa20.35■□□□□ 0.85
CTNNA1-206ENST00000517980 A0A0U1RQG5 324 aaPredicted RBP20.35■□□□□ 0.85
CTNNA1-206ENST00000517980 PTPDC1A2A3K4 754 aa20.35■□□□□ 0.85
CTNNA1-206ENST00000517980 GOLGA8HP0CJ92 632 aa20.35■□□□□ 0.85
CTNNA1-206ENST00000517980 IQSEC1Q6DN90 963 aa20.35■□□□□ 0.85
CTNNA1-206ENST00000517980 KIAA1211Q6ZU35 1233 aa20.35■□□□□ 0.85
CTNNA1-206ENST00000517980 TLK2Q86UE8 772 aa20.35■□□□□ 0.85
CTNNA1-206ENST00000517980 UBA5Q9GZZ9 404 aa20.35■□□□□ 0.85
CTNNA1-206ENST00000517980 TBX21Q9UL17 535 aa20.35■□□□□ 0.85
CTNNA1-206ENST00000517980 ZMYM6O95789 1325 aa20.34■□□□□ 0.85
CTNNA1-206ENST00000517980 CALML3P27482 149 aa20.34■□□□□ 0.85
CTNNA1-206ENST00000517980 MFAP1P55081 439 aaKnown RBP20.34■□□□□ 0.85
CTNNA1-206ENST00000517980 ZNF543Q08ER8 600 aa20.34■□□□□ 0.85
CTNNA1-206ENST00000517980 FSCN1Q16658 493 aaKnown RBP20.34■□□□□ 0.85
CTNNA1-206ENST00000517980 CLEC4DQ8WXI8 215 aa20.34■□□□□ 0.85
CTNNA1-206ENST00000517980 PPP1R12CQ9BZL4 782 aa20.34■□□□□ 0.85
CTNNA1-206ENST00000517980 DIAPH3Q9NSV4 1193 aa20.34■□□□□ 0.85
CTNNA1-206ENST00000517980 NKX3-2P78367 333 aa20.33■□□□□ 0.85
CTNNA1-206ENST00000517980 SMAD3P84022 425 aaKnown RBP20.33■□□□□ 0.85
CTNNA1-206ENST00000517980 ESR2Q92731 530 aa20.33■□□□□ 0.85
CTNNA1-206ENST00000517980 CDX2Q99626 313 aaPredicted RBP20.33■□□□□ 0.85
CTNNA1-206ENST00000517980 TTYH1Q9H313 450 aaPredicted RBP20.33■□□□□ 0.85
CTNNA1-206ENST00000517980 RNF41Q9H4P4 317 aaPredicted RBP20.33■□□□□ 0.85
CTNNA1-206ENST00000517980 SUPT16HQ9Y5B9 1047 aaKnown RBP20.33■□□□□ 0.85
CTNNA1-206ENST00000517980 MYO9BQ13459 2157 aa20.33■□□□□ 0.85
CTNNA1-206ENST00000517980 GRIN2DO15399 1336 aa20.32■□□□□ 0.84
CTNNA1-206ENST00000517980 MROH7Q68CQ1 1323 aa20.32■□□□□ 0.84
CTNNA1-206ENST00000517980 B4E1Z4 1266 aa20.32■□□□□ 0.84
CTNNA1-206ENST00000517980 KDM4AO75164 1064 aa20.32■□□□□ 0.84
CTNNA1-206ENST00000517980 ACRP10323 421 aa20.32■□□□□ 0.84
CTNNA1-206ENST00000517980 ALDH5A1P51649 535 aaPredicted RBP20.32■□□□□ 0.84
CTNNA1-206ENST00000517980 PSMC6P62333 389 aa20.32■□□□□ 0.84
CTNNA1-206ENST00000517980 MFSD5Q6N075 450 aa20.32■□□□□ 0.84
CTNNA1-206ENST00000517980 SLC30A10Q6XR72 485 aa20.32■□□□□ 0.84
CTNNA1-206ENST00000517980 C16orf59Q7L2K0 433 aa20.32■□□□□ 0.84
CTNNA1-206ENST00000517980 FAM126BQ8IXS8 530 aa20.32■□□□□ 0.84
CTNNA1-206ENST00000517980 MORC4Q8TE76 937 aa20.32■□□□□ 0.84
CTNNA1-206ENST00000517980 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.32■□□□□ 0.845e-13■■□□□ 13.1
CTNNA1-206ENST00000517980 TLR3O15455 904 aaKnown RBP20.31■□□□□ 0.84
CTNNA1-206ENST00000517980 SNHG28P0DPA3 235 aa20.31■□□□□ 0.84
CTNNA1-206ENST00000517980 PCP11498 1178 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms