RNA–Protein interactions for RNA: ENST00000517935.1

CDH12P3-201, Transcript of cadherin 12 pseudogene 3, humanhuman

BASIC

Gene CDH12P3, Length 295 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P3-201ENST00000517935 RFC2P35250 354 aa6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 CHAF1AQ13111 956 aaPredicted RBP6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 SMAD4Q13485 552 aaKnown RBP6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 RSPO4Q2I0M5 234 aaPredicted RBP6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 TUSC1Q2TAM9 212 aa6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 MSS51Q4VC12 460 aa6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 LDHAL6AQ6ZMR3 332 aa6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 FAM160A2Q8N612 972 aaPredicted RBP6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 SLC43A3Q8NBI5 491 aa6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 SHCBP1Q8NEM2 672 aa6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 WDR66Q8TBY9 1149 aa6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 VTI1AQ96AJ9 217 aa6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 MAML3Q96JK9 1138 aa6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 PLEKHF1Q96S99 279 aa6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 WNT8AQ9H1J5 351 aa6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 PNNQ9H307 717 aaKnown RBP6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 LIMD1Q9UGP4 676 aa6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 RFX7Q2KHR2 1363 aa6.29□□□□□ -1.4
CDH12P3-201ENST00000517935 USP17L15C9J2P7 530 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 USP17L13C9JLJ4 530 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 USP17L11C9JVI0 530 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 USP17L18D6R9N7 530 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 USP17L22D6RA61 530 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 USP17L17D6RBQ6 530 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 USP17L19D6RCP7 530 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 USP17L20D6RJB6 530 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 PLIN1O60240 522 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 COBLO75128 1261 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 DUSP11O75319 330 aaKnown RBP6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 BAIAP3O94812 1187 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 ASGR1P07306 291 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 LTBRP36941 435 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 CCL23P55773 120 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 USP17L24Q0WX57 530 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 GCKRQ14397 625 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 CTC1Q2NKJ3 1217 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 GPR161Q8N6U8 529 aaKnown RBP6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 BANK1Q8NDB2 785 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 KCNG4Q8TDN1 519 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 RUBCNQ92622 972 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 PCMTD1Q96MG8 357 aaPredicted RBP6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 CHMP4AQ9BY43 222 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 MROH8Q9H579 483 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 PHAXQ9H814 394 aaKnown RBP6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 GINM1Q9NU53 330 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 TIMELESSQ9UNS1 1208 aa6.28□□□□□ -1.4
CDH12P3-201ENST00000517935 KALRNO60229 2985 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 UMODL1Q5DID0 1318 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 OTOGLQ3ZCN5 2332 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 NEURL1BA8MQ27 555 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 RNF223E7ERA6 249 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 CABYRO75952 493 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 ZNF865P0CJ78 1059 aaPredicted RBP6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 ICAM3P32942 547 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 ATXN1P54253 815 aaKnown RBP6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 LMOD3Q0VAK6 560 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 KRT24Q2M2I5 525 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 USP17L2Q6R6M4 530 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 KSR2Q6VAB6 950 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 SPRED2Q7Z698 418 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 AGBL1Q96MI9 1066 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 RAD9AQ99638 391 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 HAUS7Q99871 368 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 TINF2Q9BSI4 451 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 SIL1Q9H173 461 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 SPC25Q9HBM1 224 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 GOPCQ9HD26 462 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 CNNM1Q9NRU3 951 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 HERC5Q9UII4 1024 aaKnown RBP6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 IQSEC3Q9UPP2 1182 aaPredicted RBP6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 CNPY2Q9Y2B0 182 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 DIS3Q9Y2L1 958 aaKnown RBP6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 MAP3K2Q9Y2U5 619 aa6.27□□□□□ -1.41
CDH12P3-201ENST00000517935 KIF16BQ96L93 1317 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 SMG1Q96Q15 3661 aaKnown RBP6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 LCHNA4D1U4 455 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 PRR5-ARHGAP8B1AHC4 643 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 LILRB3O75022 631 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 EYA4O95677 639 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 CLCN5P51795 746 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 CASP7P55210 303 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 NKX3-2P78367 333 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 ARHGAP8P85298 464 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 PTPN21Q16825 1174 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 CATSPERGQ6ZRH7 1159 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 EP400NLQ6ZTU2 488 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 MSL3Q8N5Y2 521 aaKnown RBP6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 TMEM105Q8N8V8 129 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 PRR7Q8TB68 274 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 C12orf42Q96LP6 360 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 UPF3AQ9H1J1 476 aaKnown RBP6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 NSUN3Q9H649 340 aaKnown RBP6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 PRDM9Q9NQV7 894 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 CLDND1Q9NY35 253 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 BTBD7Q9P203 1132 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 MTUS1Q9ULD2 1270 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 FAM184BQ9ULE4 1060 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 PCDHGC5Q9Y5F6 944 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 DMXL2Q8TDJ6 3036 aa6.26□□□□□ -1.41
CDH12P3-201ENST00000517935 MROH5Q6ZUA9 1318 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms