RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 USP5P45974 858 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 MRPS5P82675 430 aaKnown RBP8.75□□□□□ -1.01
PVT1-206ENST00000517838 GABPAQ06546 454 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 PLS1Q14651 629 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 TNNI3KQ59H18 835 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 TMEM240Q5SV17 173 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 TTC6Q86TZ1 520 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 NCAPG2Q86XI2 1143 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 SIAH1Q8IUQ4 282 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 MB21D1Q8N884 522 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 SLC44A5Q8NCS7 719 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 PI4K2BQ8TCG2 481 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 LENG1Q96BZ8 264 aaPredicted RBP8.75□□□□□ -1.01
PVT1-206ENST00000517838 ATG4CQ96DT6 458 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 FAM122AQ96E09 287 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 GBP4Q96PP9 640 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 UHRF1Q96T88 793 aaPredicted RBP8.75□□□□□ -1.01
PVT1-206ENST00000517838 GAS2L1Q99501 681 aaPredicted RBP8.75□□□□□ -1.01
PVT1-206ENST00000517838 FSD1Q9BTV5 496 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 TANGO6Q9C0B7 1094 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 CCDC8Q9H0W5 538 aaPredicted RBP8.75□□□□□ -1.01
PVT1-206ENST00000517838 PRDM12Q9H4Q4 367 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 THEGQ9P2T0 379 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 TBX21Q9UL17 535 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 FPGT-TNNI3KV9GXZ4 949 aa8.75□□□□□ -1.01
PVT1-206ENST00000517838 DCDC2CA8MYV0 355 aa8.74□□□□□ -1.01
PVT1-206ENST00000517838 ACLYP53396 1101 aa8.74□□□□□ -1.01
PVT1-206ENST00000517838 TMEM132BQ14DG7 1078 aa8.74□□□□□ -1.01
PVT1-206ENST00000517838 CCDC85BQ15834 202 aaPredicted RBP8.74□□□□□ -1.01
PVT1-206ENST00000517838 ZNF792Q3KQV3 632 aa8.74□□□□□ -1.01
PVT1-206ENST00000517838 CCSAPQ6IQ19 270 aaPredicted RBP8.74□□□□□ -1.01
PVT1-206ENST00000517838 MFSD5Q6N075 450 aa8.74□□□□□ -1.01
PVT1-206ENST00000517838 NOL8Q76FK4 1167 aaKnown RBP8.74□□□□□ -1.01
PVT1-206ENST00000517838 MAGEB6Q8N7X4 407 aa8.74□□□□□ -1.01
PVT1-206ENST00000517838 KLHDC9Q8NEP7 349 aa8.74□□□□□ -1.01
PVT1-206ENST00000517838 KIF2CQ99661 725 aa8.74□□□□□ -1.01
PVT1-206ENST00000517838 TINF2Q9BSI4 451 aa8.74□□□□□ -1.01
PVT1-206ENST00000517838 ANTXR1Q9H6X2 564 aa8.74□□□□□ -1.01
PVT1-206ENST00000517838 DBNLQ9UJU6 430 aaKnown RBP8.74□□□□□ -1.01
PVT1-206ENST00000517838 DDX11L8A8MPP1 907 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 MPHOSPH10O00566 681 aaKnown RBP8.73□□□□□ -1.01
PVT1-206ENST00000517838 FLOT1O75955 427 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 POLR3DP05423 398 aaPredicted RBP8.73□□□□□ -1.01
PVT1-206ENST00000517838 ACRP10323 421 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 BMP1P13497 986 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 CSF2RAP15509 400 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 MCM2P49736 904 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 CDK7P50613 346 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 KCNA10Q16322 511 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 CWC27Q6UX04 472 aaKnown RBP8.73□□□□□ -1.01
PVT1-206ENST00000517838 ZNF365Q70YC5 407 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 CERS3Q8IU89 383 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 SPICE1Q8N0Z3 855 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 EVI5LQ96CN4 794 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 NECAB3Q96P71 396 aaPredicted RBP8.73□□□□□ -1.01
PVT1-206ENST00000517838 RIOK1Q9BRS2 568 aaKnown RBP8.73□□□□□ -1.01
PVT1-206ENST00000517838 TSEN34Q9BSV6 310 aaKnown RBP8.73□□□□□ -1.01
PVT1-206ENST00000517838 STARD7Q9NQZ5 370 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 TLR7Q9NYK1 1049 aaKnown RBP8.73□□□□□ -1.01
PVT1-206ENST00000517838 ADAMTS5Q9UNA0 930 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 ATAD5Q96QE3 1844 aa8.73□□□□□ -1.01
PVT1-206ENST00000517838 MYADML2A6NDP7 307 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 MOXD2PA6NHM9 499 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 GOLGA6L22H0YM25 854 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 CD2BP2O95400 341 aaKnown RBP8.72□□□□□ -1.01
PVT1-206ENST00000517838 SLC25A27O95847 323 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 OATP04181 439 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 AKR1A1P14550 325 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 PTMSP20962 102 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 IGFBP4P22692 258 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 NEK4P51957 841 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 ANAPC15P60006 121 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 CCDC129Q6ZRS4 1044 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 METTL3Q86U44 580 aaKnown RBP8.72□□□□□ -1.01
PVT1-206ENST00000517838 CLEC10AQ8IUN9 316 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 NUP133Q8WUM0 1156 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 EAF2Q96CJ1 260 aaPredicted RBP8.72□□□□□ -1.01
PVT1-206ENST00000517838 MMP19Q99542 508 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 BOLA2Q9H3K6 86 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 TMEM134Q9H6X4 195 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 FBXO28Q9NVF7 368 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 TSR3Q9UJK0 312 aaKnown RBP8.72□□□□□ -1.01
PVT1-206ENST00000517838 DIS3Q9Y2L1 958 aaKnown RBP8.72□□□□□ -1.01
PVT1-206ENST00000517838 TMX2Q9Y320 296 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 RAD50Q92878 1312 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 RLFQ13129 1914 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 ROBO3Q96MS0 1386 aa8.72□□□□□ -1.01
PVT1-206ENST00000517838 RCCD1A6NED2 376 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 SGSM2O43147 1006 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 SNAI1O95863 264 aaPredicted RBP8.71□□□□□ -1.02
PVT1-206ENST00000517838 CYP2D6P10635 497 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 MCM4P33991 863 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 TFF2Q03403 129 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 PPIGQ13427 754 aaKnown RBP eCLIP8.71□□□□□ -1.024e-7■■□□□ 12.3
PVT1-206ENST00000517838 KCTD2Q14681 263 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 SWT1Q5T5J6 900 aaKnown RBP8.71□□□□□ -1.02
PVT1-206ENST00000517838 NYAP1Q6ZVC0 841 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 TMEM179Q6ZVK1 233 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 RIOX2Q8IUF8 465 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 DNAJC2Q99543 621 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms