RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 TMEM39BQ9GZU3 492 aa6.29□□□□□ -1.4
PVT1-205ENST00000517790 RSPH9Q9H1X1 276 aaPredicted RBP6.29□□□□□ -1.4
PVT1-205ENST00000517790 GREM2Q9H772 168 aa6.29□□□□□ -1.4
PVT1-205ENST00000517790 PPCSQ9HAB8 311 aa6.29□□□□□ -1.4
PVT1-205ENST00000517790 AS3MTQ9HBK9 375 aa6.29□□□□□ -1.4
PVT1-205ENST00000517790 EFR3BQ9Y2G0 817 aa6.29□□□□□ -1.4
PVT1-205ENST00000517790 R3HCC1Q9Y3T6 440 aaKnown RBP6.29□□□□□ -1.4
PVT1-205ENST00000517790 SNCAIPQ9Y6H5 919 aa6.29□□□□□ -1.4
PVT1-205ENST00000517790 DDX60LQ5H9U9 1706 aaKnown RBP6.28□□□□□ -1.4
PVT1-205ENST00000517790 ARAP2Q8WZ64 1704 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 TCP10L2B9ZVM9 353 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 MYO1BO43795 1136 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 ADCY3O60266 1144 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 RASGRP1O95267 797 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 MYL3P08590 195 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 HOXD10P28358 340 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 STAT3P40763 770 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 RAB27AP51159 221 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 RBM5P52756 815 aaKnown RBP eCLIP6.28□□□□□ -1.4
PVT1-205ENST00000517790 FUT2Q10981 343 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 C2orf27AQ580R0 203 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 MEI1Q5TIA1 1274 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 TAF3Q5VWG9 929 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 CCDC70Q6NSX1 233 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 THNSL2Q86YJ6 484 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 SPICE1Q8N0Z3 855 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.28□□□□□ -1.4
PVT1-205ENST00000517790 MAFAQ8NHW3 353 aaPredicted RBP6.28□□□□□ -1.4
PVT1-205ENST00000517790 SNRNP27Q8WVK2 155 aaKnown RBP6.28□□□□□ -1.4
PVT1-205ENST00000517790 ZKSCAN4Q969J2 545 aaPredicted RBP6.28□□□□□ -1.4
PVT1-205ENST00000517790 CDX2Q99626 313 aaPredicted RBP6.28□□□□□ -1.4
PVT1-205ENST00000517790 MYD88Q99836 296 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 TDRD3Q9H7E2 651 aaKnown RBP6.28□□□□□ -1.4
PVT1-205ENST00000517790 PTPRHQ9HD43 1115 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 CD209Q9NNX6 404 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 GINM1Q9NU53 330 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 ZNF70Q9UC06 446 aaPredicted RBP6.28□□□□□ -1.4
PVT1-205ENST00000517790 TAGLN3Q9UI15 199 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 MCM8Q9UJA3 840 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 PCDHGA4Q9Y5G9 962 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 CSADQ9Y600 493 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 MYH3P11055 1940 aa6.28□□□□□ -1.4
PVT1-205ENST00000517790 MUC3AQ02505 3323 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 PDHXO00330 501 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 PDPK1O15530 556 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 PCCAP05165 728 aaPredicted RBP6.27□□□□□ -1.41
PVT1-205ENST00000517790 FLT3LGP49771 235 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 CACNB3P54284 484 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 CTSWP56202 376 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 SNAPC2Q13487 334 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 COL9A2Q14055 689 aaPredicted RBP6.27□□□□□ -1.41
PVT1-205ENST00000517790 NECAB2Q7Z6G3 386 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 ERO1BQ86YB8 467 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 ZNF454Q8N9F8 522 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 TTLL11Q8NHH1 800 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 THAP3Q8WTV1 239 aaPredicted RBP6.27□□□□□ -1.41
PVT1-205ENST00000517790 GPKOWQ92917 476 aaPredicted RBP eCLIP6.27□□□□□ -1.41
PVT1-205ENST00000517790 FAM122AQ96E09 287 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 RBSNQ9H1K0 784 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 IFT122Q9HBG6 1241 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 PAK6Q9NQU5 681 aaPredicted RBP6.27□□□□□ -1.41
PVT1-205ENST00000517790 HDAC5Q9UQL6 1122 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 FRMD4BQ9Y2L6 1034 aa6.27□□□□□ -1.41
PVT1-205ENST00000517790 BDP1A6H8Y1 2624 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 MYO9BQ13459 2157 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 TMEM265A0A087WTH1 108 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 EIF1AYO14602 144 aaKnown RBP6.26□□□□□ -1.41
PVT1-205ENST00000517790 AKAP10O43572 662 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 CYP2C8P10632 490 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 VARSP26640 1264 aaKnown RBP6.26□□□□□ -1.41
PVT1-205ENST00000517790 FCGRTP55899 365 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 PPIL2Q13356 520 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 MOGSQ13724 837 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 TM4SF20Q53R12 229 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 ALFQ53S48 1182 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 FAM83BQ5T0W9 1011 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 FAM109BQ6ICB4 259 aaPredicted RBP6.26□□□□□ -1.41
PVT1-205ENST00000517790 ERAP2Q6P179 960 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 GET4Q7L5D6 327 aaPredicted RBP6.26□□□□□ -1.41
PVT1-205ENST00000517790 SMAP1Q8IYB5 467 aaPredicted RBP6.26□□□□□ -1.41
PVT1-205ENST00000517790 CCDC89Q8N998 374 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 MYLIPQ8WY64 445 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 WRNIP1Q96S55 665 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 DNAJC25Q9H1X3 360 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 PHAXQ9H814 394 aaKnown RBP6.26□□□□□ -1.41
PVT1-205ENST00000517790 CAAP1Q9H8G2 361 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 ZCCHC17Q9NP64 241 aaKnown RBP6.26□□□□□ -1.41
PVT1-205ENST00000517790 KBTBD4Q9NVX7 518 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 ZIM2Q9NZV7 527 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 PIEZO1Q92508 2521 aa6.26□□□□□ -1.41
PVT1-205ENST00000517790 BICDL2A1A5D9 508 aa6.25□□□□□ -1.41
PVT1-205ENST00000517790 TNFRSF10AO00220 468 aa6.25□□□□□ -1.41
PVT1-205ENST00000517790 OPLAHO14841 1288 aa6.25□□□□□ -1.41
PVT1-205ENST00000517790 TAF5LO75529 589 aa6.25□□□□□ -1.41
PVT1-205ENST00000517790 BCRP11274 1271 aa6.25□□□□□ -1.41
PVT1-205ENST00000517790 INPP5BP32019 993 aa6.25□□□□□ -1.41
PVT1-205ENST00000517790 KCNJ4P48050 445 aa6.25□□□□□ -1.41
PVT1-205ENST00000517790 RIPK4P57078 832 aa6.25□□□□□ -1.41
PVT1-205ENST00000517790 NFKB2Q00653 900 aa6.25□□□□□ -1.41
PVT1-205ENST00000517790 TRIM32Q13049 653 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms