RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 POLD1P28340 1107 aa30.01■■■□□ 2.4
COL13A1-210ENST00000517713 QRICH1Q2TAL8 776 aa30.01■■■□□ 2.4
COL13A1-210ENST00000517713 DALRD3Q5D0E6 543 aaKnown RBP30.01■■■□□ 2.4
COL13A1-210ENST00000517713 MTMR14Q8NCE2 650 aa30.01■■■□□ 2.4
COL13A1-210ENST00000517713 ARFGEF1Q9Y6D6 1849 aa30.01■■■□□ 2.4
COL13A1-210ENST00000517713 CNTNAP1P78357 1384 aa30.01■■■□□ 2.39
COL13A1-210ENST00000517713 CBFA2T2O43439 604 aa30.01■■■□□ 2.39
COL13A1-210ENST00000517713 UBASH3AP57075 661 aa30.01■■■□□ 2.39
COL13A1-210ENST00000517713 CUL4BQ13620 913 aa30.01■■■□□ 2.39
COL13A1-210ENST00000517713 UBE2SQ16763 222 aa30.01■■■□□ 2.39
COL13A1-210ENST00000517713 PSTPIP2Q9H939 334 aa30.01■■■□□ 2.39
COL13A1-210ENST00000517713 NFE2L3Q9Y4A8 694 aa30.01■■■□□ 2.39
COL13A1-210ENST00000517713 NDUFB10O96000 172 aa30■■■□□ 2.39
COL13A1-210ENST00000517713 CXCL9Q07325 125 aa30■■■□□ 2.39
COL13A1-210ENST00000517713 CCDC125Q86Z20 511 aa30■■■□□ 2.39
COL13A1-210ENST00000517713 CDC37Q16543 378 aaPredicted RBP30■■■□□ 2.39
COL13A1-210ENST00000517713 POTEDQ86YR6 584 aa30■■■□□ 2.39
COL13A1-210ENST00000517713 TRMT44Q8IYL2 757 aaKnown RBP30■■■□□ 2.39
COL13A1-210ENST00000517713 VEZTQ9HBM0 779 aa30■■■□□ 2.39
COL13A1-210ENST00000517713 TNNI2P48788 182 aa29.99■■■□□ 2.39
COL13A1-210ENST00000517713 GSDMDP57764 484 aa29.99■■■□□ 2.39
COL13A1-210ENST00000517713 NAALADL2Q58DX5 795 aa29.99■■■□□ 2.39
COL13A1-210ENST00000517713 FKBP1CQ5VVH2 108 aa29.99■■■□□ 2.39
COL13A1-210ENST00000517713 MED15Q96RN5 788 aa29.99■■■□□ 2.39
COL13A1-210ENST00000517713 EDIL3O43854 480 aa29.98■■■□□ 2.39
COL13A1-210ENST00000517713 ARID5BQ14865 1188 aa29.98■■■□□ 2.39
COL13A1-210ENST00000517713 TMC6Q7Z403 805 aa29.98■■■□□ 2.39
COL13A1-210ENST00000517713 CABP7Q86V35 215 aa29.98■■■□□ 2.39
COL13A1-210ENST00000517713 MTFR1LQ9H019 292 aa29.98■■■□□ 2.39
COL13A1-210ENST00000517713 GLT8D2Q9H1C3 349 aa29.98■■■□□ 2.39
COL13A1-210ENST00000517713 SYNPO2Q9UMS6 1093 aa29.98■■■□□ 2.39
COL13A1-210ENST00000517713 PCDHA1Q9Y5I3 950 aa29.98■■■□□ 2.39
COL13A1-210ENST00000517713 CD44P16070 742 aaKnown RBP29.98■■■□□ 2.39
COL13A1-210ENST00000517713 TECP42680 631 aa29.98■■■□□ 2.39
COL13A1-210ENST00000517713 CALCRLQ16602 461 aa29.98■■■□□ 2.39
COL13A1-210ENST00000517713 DPF2Q92785 391 aa29.98■■■□□ 2.39
COL13A1-210ENST00000517713 NAP1L5Q96NT1 182 aaPredicted RBP29.98■■■□□ 2.39
COL13A1-210ENST00000517713 MTMR9Q96QG7 549 aa29.98■■■□□ 2.39
COL13A1-210ENST00000517713 NUP88Q99567 741 aaPredicted RBP29.98■■■□□ 2.39
COL13A1-210ENST00000517713 TAOK3Q9H2K8 898 aa29.98■■■□□ 2.39
COL13A1-210ENST00000517713 ZNF18P17022 549 aa29.97■■■□□ 2.39
COL13A1-210ENST00000517713 RMND1Q9NWS8 449 aa29.97■■■□□ 2.39
COL13A1-210ENST00000517713 A0A1W2PRG0 241 aa29.96■■■□□ 2.39
COL13A1-210ENST00000517713 PPP1R3GB7ZBB8 358 aa29.96■■■□□ 2.39
COL13A1-210ENST00000517713 TDP2O95551 362 aa29.96■■■□□ 2.39
COL13A1-210ENST00000517713 RPN1P04843 607 aaKnown RBP29.96■■■□□ 2.39
COL13A1-210ENST00000517713 BMP3P12645 472 aa29.96■■■□□ 2.39
COL13A1-210ENST00000517713 CIAPIN1Q6FI81 312 aa29.96■■■□□ 2.39
COL13A1-210ENST00000517713 JDP2Q8WYK2 163 aa29.96■■■□□ 2.39
COL13A1-210ENST00000517713 PLIN2Q99541 437 aa29.96■■■□□ 2.39
COL13A1-210ENST00000517713 GOLGB1Q14789 3259 aaKnown RBP29.95■■■□□ 2.39
COL13A1-210ENST00000517713 SLC37A4O43826 429 aa29.95■■■□□ 2.39
COL13A1-210ENST00000517713 CDK11BP21127 795 aaKnown RBP29.95■■■□□ 2.39
COL13A1-210ENST00000517713 TXKP42681 527 aa29.95■■■□□ 2.39
COL13A1-210ENST00000517713 PPP4R3AQ6IN85 833 aa29.95■■■□□ 2.39
COL13A1-210ENST00000517713 KLHL10Q6JEL2 608 aa29.95■■■□□ 2.39
COL13A1-210ENST00000517713 SMYD4Q8IYR2 804 aaPredicted RBP29.95■■■□□ 2.39
COL13A1-210ENST00000517713 IGSF22Q8N9C0 903 aa29.95■■■□□ 2.39
COL13A1-210ENST00000517713 CUEDC2Q9H467 287 aa29.95■■■□□ 2.39
COL13A1-210ENST00000517713 TMEM232C9JQI7 657 aa29.95■■■□□ 2.38
COL13A1-210ENST00000517713 IKQ13123 557 aaPredicted RBP29.95■■■□□ 2.38
COL13A1-210ENST00000517713 SYDE2Q5VT97 1194 aa29.95■■■□□ 2.38
COL13A1-210ENST00000517713 FAM83AQ86UY5 434 aa29.95■■■□□ 2.38
COL13A1-210ENST00000517713 ZBED3Q96IU2 234 aaPredicted RBP29.95■■■□□ 2.38
COL13A1-210ENST00000517713 ARHGEF10LQ9HCE6 1279 aa29.95■■■□□ 2.38
COL13A1-210ENST00000517713 FER1L6Q2WGJ9 1857 aa29.94■■■□□ 2.38
COL13A1-210ENST00000517713 MYL1P05976 194 aa29.94■■■□□ 2.38
COL13A1-210ENST00000517713 HSP90AA4PQ58FG1 418 aa29.94■■■□□ 2.38
COL13A1-210ENST00000517713 SPATA1Q5VX52 437 aa29.94■■■□□ 2.38
COL13A1-210ENST00000517713 TMEM39BQ9GZU3 492 aa29.94■■■□□ 2.38
COL13A1-210ENST00000517713 MAGEF1Q9HAY2 307 aa29.94■■■□□ 2.38
COL13A1-210ENST00000517713 KBTBD4Q9NVX7 518 aa29.94■■■□□ 2.38
COL13A1-210ENST00000517713 SYNRGQ9UMZ2 1314 aa29.94■■■□□ 2.38
COL13A1-210ENST00000517713 PLCG1P19174 1290 aa29.93■■■□□ 2.38
COL13A1-210ENST00000517713 TBC1D12O60347 775 aa29.93■■■□□ 2.38
COL13A1-210ENST00000517713 FXR2P51116 673 aaKnown RBP eCLIP29.93■■■□□ 2.38
COL13A1-210ENST00000517713 DNTTIP2Q5QJE6 756 aaKnown RBP29.93■■■□□ 2.38
COL13A1-210ENST00000517713 ZNF658Q5TYW1 1059 aaPredicted RBP29.93■■■□□ 2.38
COL13A1-210ENST00000517713 BTNL9Q6UXG8 535 aa29.93■■■□□ 2.38
COL13A1-210ENST00000517713 AMNQ9BXJ7 453 aa29.93■■■□□ 2.38
COL13A1-210ENST00000517713 SAMSN1Q9NSI8 373 aaKnown RBP29.93■■■□□ 2.38
COL13A1-210ENST00000517713 PPP1R1BQ9UD71 204 aaPredicted RBP29.93■■■□□ 2.38
COL13A1-210ENST00000517713 DHX8Q14562 1220 aaKnown RBP29.92■■■□□ 2.38
COL13A1-210ENST00000517713 TMEM266Q2M3C6 531 aa29.92■■■□□ 2.38
COL13A1-210ENST00000517713 BRCA1P38398 1863 aaKnown RBP29.92■■■□□ 2.38
COL13A1-210ENST00000517713 USP17L15C9J2P7 530 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 USP17L13C9JLJ4 530 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 USP17L11C9JVI0 530 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 USP17L18D6R9N7 530 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 USP17L22D6RA61 530 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 USP17L17D6RBQ6 530 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 USP17L19D6RCP7 530 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 USP17L20D6RJB6 530 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 ECE1P42892 770 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 STX17P56962 302 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 SNAP25P60880 206 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 USP17L24Q0WX57 530 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 USP17L6PQ6QN14 398 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 LRRC15Q8TF66 581 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 MMTAG2Q9BU76 263 aaKnown RBP29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms