RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 HOXD10P28358 340 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 SMARCA1P28370 1054 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 MAP2K5Q13163 448 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 BAATQ14032 418 aaPredicted RBP11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 GRB14Q14449 540 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 ARHGEF6Q15052 776 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 ANKRD1Q15327 319 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 NTRK3Q16288 839 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 CCL14Q16627 93 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 TKFCQ3LXA3 575 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 NSMFQ6X4W1 530 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 CHST13Q8NET6 341 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 NPLOC4Q8TAT6 608 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 RAET1EQ8TD07 263 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 GPKOWQ92917 476 aaPredicted RBP eCLIP11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 RRP36Q96EU6 259 aaKnown RBP11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 AMNQ9BXJ7 453 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 SLKQ9H2G2 1235 aaPredicted RBP11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 ACAD9Q9H845 621 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 PCDHA1Q9Y5I3 950 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 DDX49Q9Y6V7 483 aaKnown RBP11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 MYH6P13533 1939 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 CNTNAP5Q8WYK1 1306 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 PLXNB2O15031 1838 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 HTTP42858 3142 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 STRNO43815 780 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 ADCY3O60266 1144 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 MYCP01106 439 aaPredicted RBP11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 RCAN1P53805 252 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 CNTN2Q02246 1040 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 ST3GAL1Q11201 340 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 TRIM32Q13049 653 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 KCTD2Q14681 263 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 DPP9Q86TI2 863 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 ANKRD35Q8N283 1001 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 SH3TC2Q8TF17 1288 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 DDX11Q96FC9 970 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 SLC26A6Q9BXS9 759 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 A1CFQ9NQ94 594 aaKnown RBP11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 FLRT1Q9NZU1 646 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 LIMCH1Q9UPQ0 1083 aa11.25□□□□□ -0.61
SCARNA16-201ENST00000515981 CCDC196A0A1B0GTZ2 297 aa11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 OPLAHO14841 1288 aa11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 CTDNEP1O95476 244 aa11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 GNRH1P01148 92 aa11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 CALML3P27482 149 aa11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 COPB2P35606 906 aa11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 RGS2P41220 211 aa11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 PPP2R5BQ15173 497 aa11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 FBXO46Q6PJ61 603 aaPredicted RBP11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 SLC30A10Q6XR72 485 aa11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 HEATR3Q7Z4Q2 680 aa11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 SEC63Q9UGP8 760 aaKnown RBP11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 FBXO40Q9UH90 709 aa11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 ABCB11O95342 1321 aa11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 NID2Q14112 1375 aa11.24□□□□□ -0.61
SCARNA16-201ENST00000515981 PTPDC1A2A3K4 754 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 SOWAHBA6NEL2 793 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 POTEB2H3BUK9 544 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 CPLX1O14810 134 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 PRPF3O43395 683 aaKnown RBP11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 IFNAR1P17181 557 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 HOXA13P31271 388 aaPredicted RBP11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 PRMT2P55345 433 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 RPS6P62753 249 aaKnown RBP11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 IRF5Q13568 498 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 PKN1Q16512 942 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 ZNF792Q3KQV3 632 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 WWC2Q6AWC2 1192 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 CCDC83Q8IWF9 413 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 ABRAQ8N0Z2 381 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 SOCS4Q8WXH5 440 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 TRIB2Q92519 343 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 GTF3C6Q969F1 213 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 FGD4Q96M96 766 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 AIFM3Q96NN9 605 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 CYP39A1Q9NYL5 469 aa11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 BIN2Q9UBW5 565 aaPredicted RBP11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 MRPL11Q9Y3B7 192 aaKnown RBP11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 KIAA0100Q14667 2235 aaKnown RBP11.23□□□□□ -0.61
SCARNA16-201ENST00000515981 CENPFP49454 3210 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 DNAJC25-GNG10A0A024R161 153 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 ASTN1O14525 1302 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 ADAMTS3O15072 1205 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 ST18O60284 1047 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 JAK2O60674 1132 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 CFBP00751 764 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 HOXC6P09630 235 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 GRK4P32298 578 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 CYP2C19P33261 490 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 SSRP1Q08945 709 aaKnown RBP11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 PKN2Q16513 984 aaKnown RBP11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 PFKFB3Q16875 520 aaPredicted RBP11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 PRAMEF19Q5SWL8 479 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 RNF207Q6ZRF8 634 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 FAM133AQ8N9E0 248 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 SYTL5Q8TDW5 730 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms