RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 SLC38A10Q9HBR0 1119 aa12.07□□□□□ -0.48
TRIM41-209ENST00000515834 BAG5Q9UL15 447 aa12.07□□□□□ -0.48
TRIM41-209ENST00000515834 PNMA6EA0A0J9YXQ4 647 aa12.07□□□□□ -0.48
TRIM41-209ENST00000515834 GIGYF1O75420 1035 aaPredicted RBP12.07□□□□□ -0.48
TRIM41-209ENST00000515834 RNF8O76064 485 aa12.07□□□□□ -0.48
TRIM41-209ENST00000515834 GBP1P32455 592 aa12.07□□□□□ -0.48
TRIM41-209ENST00000515834 IFIH1Q9BYX4 1025 aaKnown RBP12.07□□□□□ -0.48
TRIM41-209ENST00000515834 NFE2L3Q9Y4A8 694 aa12.07□□□□□ -0.48
TRIM41-209ENST00000515834 RAPGEF6Q8TEU7 1601 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 THAP12O43422 761 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 BUB1BO60566 1050 aaPredicted RBP12.06□□□□□ -0.48
TRIM41-209ENST00000515834 LMNB1P20700 586 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 GTF2A1P52655 376 aaPredicted RBP12.06□□□□□ -0.48
TRIM41-209ENST00000515834 CDR2Q01850 454 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 IQCB1Q15051 598 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 PPP2R5BQ15173 497 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 C2orf69Q8N8R5 385 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 RPRD2Q5VT52 1461 aaKnown RBP12.06□□□□□ -0.48
TRIM41-209ENST00000515834 BUB1O43683 1085 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 PGBD1Q96JS3 809 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 PHBP35232 272 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 CCDC13Q8IYE1 715 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 ZBTB40Q9NUA8 1239 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 SLC16A2P36021 539 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 CFAP221Q4G0U5 840 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 NEK8Q86SG6 692 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 CCNYQ8ND76 341 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 RABGAP1Q9Y3P9 1069 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 ANKRD20A3Q5VUR7 823 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 ZBTB38Q8NAP3 1195 aaPredicted RBP12.06□□□□□ -0.48
TRIM41-209ENST00000515834 SNX21Q969T3 373 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 MIS12Q9H081 205 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 SLC39A2Q9NP94 309 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 XDHP47989 1333 aa12.06□□□□□ -0.48
TRIM41-209ENST00000515834 FBXW4P57775 412 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 GJA10Q969M2 543 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 PRDM5Q9NQX1 630 aaPredicted RBP12.05□□□□□ -0.48
TRIM41-209ENST00000515834 ZNF215Q9UL58 517 aaPredicted RBP12.05□□□□□ -0.48
TRIM41-209ENST00000515834 ARHGAP42A6NI28 874 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 CDC26Q8NHZ8 85 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 KCNK3O14649 394 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 GOLGA5Q8TBA6 731 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 SLC7A3Q8WY07 619 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 GUCY2FP51841 1108 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 EPHB1P54762 984 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 TFAMQ00059 246 aaKnown RBP12.05□□□□□ -0.48
TRIM41-209ENST00000515834 BFSP1Q12934 665 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 ODR4Q5SWX8 454 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 P3H4Q92791 437 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 FAM114A2Q9NRY5 505 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 TRAPPC8Q9Y2L5 1435 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 KCNQ3O43525 872 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 N4BP1O75113 896 aaKnown RBP12.05□□□□□ -0.48
TRIM41-209ENST00000515834 INTS4Q96HW7 963 aaKnown RBP12.05□□□□□ -0.48
TRIM41-209ENST00000515834 FAM49AQ9H0Q0 323 aaPredicted RBP12.05□□□□□ -0.48
TRIM41-209ENST00000515834 OR52Z1P0C646 297 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 NACC1Q96RE7 527 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 KMT5AQ9NQR1 393 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 ARMCX3Q9UH62 379 aaPredicted RBP12.05□□□□□ -0.48
TRIM41-209ENST00000515834 WDR17Q8IZU2 1322 aa12.05□□□□□ -0.48
TRIM41-209ENST00000515834 GPATCH8Q9UKJ3 1502 aaKnown RBP12.05□□□□□ -0.48
TRIM41-209ENST00000515834 GNL1P36915 607 aaPredicted RBP12.04□□□□□ -0.48
TRIM41-209ENST00000515834 NFX1Q12986 1120 aaKnown RBP12.04□□□□□ -0.48
TRIM41-209ENST00000515834 MTERF2Q49AM1 385 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 CCDC93Q567U6 631 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 ZNF18P17022 549 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 POLR2FP61218 127 aaKnown RBP12.04□□□□□ -0.48
TRIM41-209ENST00000515834 MMEL1Q495T6 779 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 LRRC24Q50LG9 513 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 LARSQ9P2J5 1176 aaKnown RBP12.04□□□□□ -0.48
TRIM41-209ENST00000515834 PNMA2Q9UL42 364 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 ITSN2Q9NZM3 1697 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 IL13P35225 146 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 HP1BP3Q5SSJ5 553 aaPredicted RBP12.04□□□□□ -0.48
TRIM41-209ENST00000515834 MCTP2Q6DN12 878 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 N4BP2L2Q92802 583 aaPredicted RBP12.04□□□□□ -0.48
TRIM41-209ENST00000515834 GREM2Q9H772 168 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 PALD1Q9ULE6 856 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 KIAA1024Q9UPX6 916 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 INPP5FQ9Y2H2 1132 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 COL4A3BPQ9Y5P4 624 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 MYL7Q01449 175 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 PDE1CQ14123 709 aaPredicted RBP12.04□□□□□ -0.48
TRIM41-209ENST00000515834 UHMK1Q8TAS1 419 aaKnown RBP12.04□□□□□ -0.48
TRIM41-209ENST00000515834 NXF1Q9UBU9 619 aaKnown RBP12.04□□□□□ -0.48
TRIM41-209ENST00000515834 FIS1Q9Y3D6 152 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 TNKSO95271 1327 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 NVLO15381 856 aaKnown RBP12.04□□□□□ -0.48
TRIM41-209ENST00000515834 SRGAP2CP0DJJ0 459 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 GARSP41250 739 aaKnown RBP12.04□□□□□ -0.48
TRIM41-209ENST00000515834 DSTYKQ6XUX3 929 aa12.04□□□□□ -0.48
TRIM41-209ENST00000515834 CCDC84Q86UT8 332 aaPredicted RBP12.04□□□□□ -0.48
TRIM41-209ENST00000515834 NDUFAB1O14561 156 aa12.03□□□□□ -0.48
TRIM41-209ENST00000515834 KRT10P13645 584 aa12.03□□□□□ -0.48
TRIM41-209ENST00000515834 PHKG2P15735 406 aa12.03□□□□□ -0.48
TRIM41-209ENST00000515834 SNAP25P60880 206 aa12.03□□□□□ -0.48
TRIM41-209ENST00000515834 TMTC1Q8IUR5 882 aa12.03□□□□□ -0.48
TRIM41-209ENST00000515834 ELMOD1Q8N336 334 aa12.03□□□□□ -0.48
TRIM41-209ENST00000515834 RNF139Q8WU17 664 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms