RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 PPARAQ07869 468 aa27.14■■□□□ 1.94
SMAD1-214ENST00000514831 RAB30Q15771 203 aa27.14■■□□□ 1.94
SMAD1-214ENST00000514831 PPP4R3BQ5MIZ7 849 aa27.14■■□□□ 1.94
SMAD1-214ENST00000514831 AKNAD1Q5T1N1 836 aa27.14■■□□□ 1.94
SMAD1-214ENST00000514831 DIEXFQ68CQ4 756 aaKnown RBP27.14■■□□□ 1.94
SMAD1-214ENST00000514831 CXCL17Q6UXB2 119 aa27.14■■□□□ 1.94
SMAD1-214ENST00000514831 HERVK_113Q902F9 699 aa27.14■■□□□ 1.94
SMAD1-214ENST00000514831 NAPBQ9H115 298 aa27.14■■□□□ 1.94
SMAD1-214ENST00000514831 TTC41PQ6P2S7 1318 aa27.14■■□□□ 1.93
SMAD1-214ENST00000514831 IKQ13123 557 aaPredicted RBP27.13■■□□□ 1.93
SMAD1-214ENST00000514831 FSCN1Q16658 493 aaKnown RBP27.13■■□□□ 1.93
SMAD1-214ENST00000514831 NOL8Q76FK4 1167 aaKnown RBP27.13■■□□□ 1.93
SMAD1-214ENST00000514831 TRERF1Q96PN7 1200 aa27.13■■□□□ 1.93
SMAD1-214ENST00000514831 SEC62Q99442 399 aaKnown RBP27.13■■□□□ 1.93
SMAD1-214ENST00000514831 SEZ6LQ9BYH1 1024 aa27.13■■□□□ 1.93
SMAD1-214ENST00000514831 MTIF3Q9H2K0 278 aaKnown RBP27.13■■□□□ 1.93
SMAD1-214ENST00000514831 HIPK3Q9H422 1215 aa27.13■■□□□ 1.93
SMAD1-214ENST00000514831 PRDM12Q9H4Q4 367 aa27.13■■□□□ 1.93
SMAD1-214ENST00000514831 ALAS1P13196 640 aa27.11■■□□□ 1.93
SMAD1-214ENST00000514831 ITGA7Q13683 1181 aa27.11■■□□□ 1.93
SMAD1-214ENST00000514831 AP5M1Q9H0R1 490 aa27.11■■□□□ 1.93
SMAD1-214ENST00000514831 MSRAQ9UJ68 235 aa27.11■■□□□ 1.93
SMAD1-214ENST00000514831 SMPD1P17405 629 aa27.1■■□□□ 1.93
SMAD1-214ENST00000514831 MCCP23508 829 aa27.1■■□□□ 1.93
SMAD1-214ENST00000514831 ZMYM1Q5SVZ6 1142 aa27.1■■□□□ 1.93
SMAD1-214ENST00000514831 PI4K2BQ8TCG2 481 aa27.1■■□□□ 1.93
SMAD1-214ENST00000514831 CYP39A1Q9NYL5 469 aa27.1■■□□□ 1.93
SMAD1-214ENST00000514831 CXXC1Q9P0U4 656 aaPredicted RBP27.1■■□□□ 1.93
SMAD1-214ENST00000514831 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.1■■□□□ 1.93
SMAD1-214ENST00000514831 Q9Y3F1 56 aa27.1■■□□□ 1.93
SMAD1-214ENST00000514831 GRIN2DO15399 1336 aa27.1■■□□□ 1.93
SMAD1-214ENST00000514831 UMODL1Q5DID0 1318 aa27.1■■□□□ 1.93
SMAD1-214ENST00000514831 ERC2O15083 957 aa27.09■■□□□ 1.93
SMAD1-214ENST00000514831 ZEB2O60315 1214 aa27.09■■□□□ 1.93
SMAD1-214ENST00000514831 KCTD1Q719H9 257 aa27.09■■□□□ 1.93
SMAD1-214ENST00000514831 ATXN2LQ8WWM7 1075 aaKnown RBP27.09■■□□□ 1.93
SMAD1-214ENST00000514831 FSD1Q9BTV5 496 aa27.09■■□□□ 1.93
SMAD1-214ENST00000514831 NOC4LQ9BVI4 516 aaKnown RBP27.09■■□□□ 1.93
SMAD1-214ENST00000514831 PRR12Q9ULL5 1215 aa27.09■■□□□ 1.93
SMAD1-214ENST00000514831 STX8Q9UNK0 236 aa27.09■■□□□ 1.93
SMAD1-214ENST00000514831 MUC3AQ02505 3323 aa27.08■■□□□ 1.93
SMAD1-214ENST00000514831 TNFRSF10AO00220 468 aa27.08■■□□□ 1.93
SMAD1-214ENST00000514831 FGBP02675 491 aa27.08■■□□□ 1.93
SMAD1-214ENST00000514831 PTGS1P23219 599 aa27.08■■□□□ 1.93
SMAD1-214ENST00000514831 MUM1L1Q5H9M0 696 aa27.08■■□□□ 1.93
SMAD1-214ENST00000514831 IQSEC1Q6DN90 963 aa27.08■■□□□ 1.93
SMAD1-214ENST00000514831 RCSD1Q6JBY9 416 aa27.08■■□□□ 1.93
SMAD1-214ENST00000514831 TAPT1Q6NXT6 567 aa27.08■■□□□ 1.93
SMAD1-214ENST00000514831 FBXO16Q8IX29 292 aaPredicted RBP27.08■■□□□ 1.93
SMAD1-214ENST00000514831 THEGQ9P2T0 379 aa27.08■■□□□ 1.93
SMAD1-214ENST00000514831 DDX49Q9Y6V7 483 aaKnown RBP27.08■■□□□ 1.93
SMAD1-214ENST00000514831 TSPY2A6NKD2 308 aa27.07■■□□□ 1.92
SMAD1-214ENST00000514831 DYNC1LI2O43237 492 aaPredicted RBP27.07■■□□□ 1.92
SMAD1-214ENST00000514831 B4GALT4O60513 344 aa27.07■■□□□ 1.92
SMAD1-214ENST00000514831 ADGRE1Q14246 886 aa27.07■■□□□ 1.92
SMAD1-214ENST00000514831 RASGRP2Q7LDG7 609 aa27.07■■□□□ 1.92
SMAD1-214ENST00000514831 MORC4Q8TE76 937 aa27.07■■□□□ 1.92
SMAD1-214ENST00000514831 PPM1EQ8WY54 764 aa27.07■■□□□ 1.92
SMAD1-214ENST00000514831 CHMP4CQ96CF2 233 aa27.07■■□□□ 1.92
SMAD1-214ENST00000514831 VTA1Q9NP79 307 aa27.07■■□□□ 1.92
SMAD1-214ENST00000514831 PDGFCQ9NRA1 345 aa27.07■■□□□ 1.92
SMAD1-214ENST00000514831 IL17RBQ9NRM6 502 aa27.07■■□□□ 1.92
SMAD1-214ENST00000514831 CHD9Q3L8U1 2897 aa27.07■■□□□ 1.92
SMAD1-214ENST00000514831 FOXP2O15409 715 aa27.06■■□□□ 1.92
SMAD1-214ENST00000514831 EEPD1Q7L9B9 569 aa27.06■■□□□ 1.92
SMAD1-214ENST00000514831 WNT8AQ9H1J5 351 aa27.06■■□□□ 1.92
SMAD1-214ENST00000514831 NKX2-4Q9H2Z4 354 aa27.06■■□□□ 1.92
SMAD1-214ENST00000514831 CCPG1Q9ULG6 757 aa27.06■■□□□ 1.92
SMAD1-214ENST00000514831 YBX2Q9Y2T7 364 aaKnown RBP27.06■■□□□ 1.92
SMAD1-214ENST00000514831 CCL23P55773 120 aa27.05■■□□□ 1.92
SMAD1-214ENST00000514831 SNAP25P60880 206 aa27.05■■□□□ 1.92
SMAD1-214ENST00000514831 OTOP2Q7RTS6 562 aa27.05■■□□□ 1.92
SMAD1-214ENST00000514831 TRPV6Q9H1D0 765 aa27.05■■□□□ 1.92
SMAD1-214ENST00000514831 SLC28A3Q9HAS3 691 aa27.05■■□□□ 1.92
SMAD1-214ENST00000514831 NMT2O60551 498 aa27.04■■□□□ 1.92
SMAD1-214ENST00000514831 ICAM1P05362 532 aa27.04■■□□□ 1.92
SMAD1-214ENST00000514831 NOVP48745 357 aa27.04■■□□□ 1.92
SMAD1-214ENST00000514831 PSMC6P62333 389 aa27.04■■□□□ 1.92
SMAD1-214ENST00000514831 NSMFQ6X4W1 530 aa27.04■■□□□ 1.92
SMAD1-214ENST00000514831 CTDSPL2Q05D32 466 aa27.03■■□□□ 1.92
SMAD1-214ENST00000514831 TMEM63BQ5T3F8 832 aa27.03■■□□□ 1.92
SMAD1-214ENST00000514831 OTUD7AQ8TE49 926 aaPredicted RBP27.03■■□□□ 1.92
SMAD1-214ENST00000514831 ASB2Q96Q27 587 aa27.03■■□□□ 1.92
SMAD1-214ENST00000514831 RANBP17Q9H2T7 1088 aaKnown RBP27.03■■□□□ 1.92
SMAD1-214ENST00000514831 LOC102724159A0A0B4J2E5 919 aa27.02■■□□□ 1.92
SMAD1-214ENST00000514831 PWP2Q15269 919 aaKnown RBP27.02■■□□□ 1.92
SMAD1-214ENST00000514831 DUSP28Q4G0W2 176 aa27.02■■□□□ 1.92
SMAD1-214ENST00000514831 KIAA1211Q6ZU35 1233 aa27.02■■□□□ 1.92
SMAD1-214ENST00000514831 RPUSD2Q8IZ73 545 aaKnown RBP27.02■■□□□ 1.92
SMAD1-214ENST00000514831 DCAF4Q8WV16 495 aa27.02■■□□□ 1.92
SMAD1-214ENST00000514831 ALDH8A1Q9H2A2 487 aaPredicted RBP27.02■■□□□ 1.92
SMAD1-214ENST00000514831 ADD3Q9UEY8 706 aaKnown RBP27.02■■□□□ 1.92
SMAD1-214ENST00000514831 ANAPC4Q9UJX5 808 aa27.02■■□□□ 1.92
SMAD1-214ENST00000514831 TANC1Q9C0D5 1861 aa27.02■■□□□ 1.92
SMAD1-214ENST00000514831 SCN10AQ9Y5Y9 1956 aa27.01■■□□□ 1.91
SMAD1-214ENST00000514831 IGFBP4P22692 258 aa27.01■■□□□ 1.91
SMAD1-214ENST00000514831 CCDC96Q2M329 555 aa27.01■■□□□ 1.91
SMAD1-214ENST00000514831 VWCEQ96DN2 955 aa27.01■■□□□ 1.91
SMAD1-214ENST00000514831 PURBQ96QR8 312 aaKnown RBP27.01■■□□□ 1.91
SMAD1-214ENST00000514831 INCENPQ9NQS7 918 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms