RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 APOA5Q6Q788 366 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 THSD4Q6ZMP0 1018 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 Q6ZUG5 572 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 KCTD1Q719H9 257 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 RIOX2Q8IUF8 465 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 ABRAQ8N0Z2 381 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 ANKRD13CQ8N6S4 541 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 REPS2Q8NFH8 660 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 ZNF296Q8WUU4 475 aaPredicted RBP8.25□□□□□ -1.09
SMAD1-213ENST00000514778 WNT2BQ93097 391 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 KIFC2Q96AC6 838 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 ATG4CQ96DT6 458 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 TBC1D32Q96NH3 1257 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 NUP88Q99567 741 aaPredicted RBP8.25□□□□□ -1.09
SMAD1-213ENST00000514778 TEX13BQ9BXU2 312 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 SPATC1LQ9H0A9 340 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 R3HDMLQ9H3Y0 253 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 RIOX1Q9H6W3 641 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 PDRG1Q9NUG6 133 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 FBXO28Q9NVF7 368 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 FBXO40Q9UH90 709 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 CPA4Q9UI42 421 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 ZNF214Q9UL59 606 aaPredicted RBP8.25□□□□□ -1.09
SMAD1-213ENST00000514778 PRR12Q9ULL5 1215 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 CTDP1Q9Y5B0 961 aaPredicted RBP8.25□□□□□ -1.09
SMAD1-213ENST00000514778 CEP350Q5VT06 3117 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 A0A0G2JMZ2 1700 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 KLF18A0A0U1RQI7 1052 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 DHX16O60231 1041 aaKnown RBP8.24□□□□□ -1.09
SMAD1-213ENST00000514778 CNMDO75829 334 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 ICAM1P05362 532 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 STAT3P40763 770 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 MCM2P49736 904 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 TMEM132BQ14DG7 1078 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 E2F4Q16254 413 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 C6orf132Q5T0Z8 1188 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 SAMD3Q8N6K7 520 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 CHST13Q8NET6 341 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 BRF1Q92994 677 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 COA7Q96BR5 231 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 MTMR8Q96EF0 704 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 SPZ1Q9BXG8 430 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 SENP2Q9HC62 589 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 TXNRD2Q9NNW7 524 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 GPCPD1Q9NPB8 672 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 BTBD7Q9P203 1132 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 RBM27Q9P2N5 1060 aaKnown RBP8.24□□□□□ -1.09
SMAD1-213ENST00000514778 BRPF3Q9ULD4 1205 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 MYH4Q9Y623 1939 aa8.24□□□□□ -1.09
SMAD1-213ENST00000514778 FRMPD2Q68DX3 1309 aaPredicted RBP8.24□□□□□ -1.09
SMAD1-213ENST00000514778 hCG_1984214I3L0E3 225 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 XRCC5P13010 732 aaKnown RBP8.23□□□□□ -1.09
SMAD1-213ENST00000514778 CPA1P15085 419 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 PSMC4P43686 418 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 METAP2P50579 478 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMAD1-213ENST00000514778 NEK4P51957 841 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 LBX1P52954 281 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 PTPN5P54829 565 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 IRF5Q13568 498 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 COL9A3Q14050 684 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-213ENST00000514778 TOB2Q14106 344 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-213ENST00000514778 RTN1Q16799 776 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 PROX2Q3B8N5 592 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 Q3C1V9 767 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 TTBK2Q6IQ55 1244 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 CCAR1Q8IX12 1150 aaKnown RBP8.23□□□□□ -1.09
SMAD1-213ENST00000514778 TRMT44Q8IYL2 757 aaKnown RBP8.23□□□□□ -1.09
SMAD1-213ENST00000514778 ADGRF4Q8IZF3 695 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 FAM177A1Q8N128 213 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-213ENST00000514778 STAG2Q8N3U4 1231 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 ZNF713Q8N859 430 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-213ENST00000514778 RGS22Q8NE09 1264 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 NUP133Q8WUM0 1156 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 SOCS4Q8WXH5 440 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 KIF2CQ99661 725 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 PAGR1Q9BTK6 254 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 MOV10L1Q9BXT6 1211 aaKnown RBP8.23□□□□□ -1.09
SMAD1-213ENST00000514778 UPF3BQ9BZI7 483 aaKnown RBP8.23□□□□□ -1.09
SMAD1-213ENST00000514778 JMJD4Q9H9V9 463 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 WDR70Q9NW82 654 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 SLC5A4Q9NY91 659 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 MAP3K20Q9NYL2 800 aaKnown RBP8.23□□□□□ -1.09
SMAD1-213ENST00000514778 ISY1Q9ULR0 285 aaKnown RBP8.23□□□□□ -1.09
SMAD1-213ENST00000514778 ARIH1Q9Y4X5 557 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-213ENST00000514778 ZNF536O15090 1300 aa8.23□□□□□ -1.09
SMAD1-213ENST00000514778 LOC102724159A0A0B4J2E5 919 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 PNMA6FA0A0J9YX94 578 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 SLC15A5A6NIM6 579 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 GOLGA8BA8MQT2 603 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 TNPO2O14787 897 aaKnown RBP8.22□□□□□ -1.09
SMAD1-213ENST00000514778 ZBTB5O15062 677 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 FMNL1O95466 1100 aaPredicted RBP8.22□□□□□ -1.09
SMAD1-213ENST00000514778 HOXC6P09630 235 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 GOLGA8HP0CJ92 632 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 PDIA3P30101 505 aaKnown RBP8.22□□□□□ -1.09
SMAD1-213ENST00000514778 APOBRQ0VD83 1088 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 PWP2Q15269 919 aaKnown RBP8.22□□□□□ -1.09
SMAD1-213ENST00000514778 CPLX2Q6PUV4 134 aaKnown RBP8.22□□□□□ -1.09
SMAD1-213ENST00000514778 TMTC3Q6ZXV5 915 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 PLEKHH3Q7Z736 793 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms