RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 ICAM1P05362 532 aa15.69■□□□□ 0.1
PFDN1-206ENST00000514611 ASGR1P07306 291 aa15.69■□□□□ 0.1
PFDN1-206ENST00000514611 PDHBP11177 359 aa15.69■□□□□ 0.1
PFDN1-206ENST00000514611 GJA9P57773 515 aa15.69■□□□□ 0.1
PFDN1-206ENST00000514611 CWC27Q6UX04 472 aaKnown RBP15.69■□□□□ 0.1
PFDN1-206ENST00000514611 BTNL9Q6UXG8 535 aa15.69■□□□□ 0.1
PFDN1-206ENST00000514611 NSMFQ6X4W1 530 aa15.69■□□□□ 0.1
PFDN1-206ENST00000514611 MFSD6Q6ZSS7 791 aa15.69■□□□□ 0.1
PFDN1-206ENST00000514611 FBXO16Q8IX29 292 aaPredicted RBP15.69■□□□□ 0.1
PFDN1-206ENST00000514611 NUP133Q8WUM0 1156 aa15.69■□□□□ 0.1
PFDN1-206ENST00000514611 ZKSCAN3Q9BRR0 538 aa15.69■□□□□ 0.1
PFDN1-206ENST00000514611 UPF3AQ9H1J1 476 aaKnown RBP15.69■□□□□ 0.1
PFDN1-206ENST00000514611 MTMR10Q9NXD2 777 aa15.69■□□□□ 0.1
PFDN1-206ENST00000514611 EYSQ5T1H1 3165 aa15.69■□□□□ 0.1
PFDN1-206ENST00000514611 MCM3APO60318 1980 aa15.68■□□□□ 0.1
PFDN1-206ENST00000514611 NFIBO00712 420 aa15.68■□□□□ 0.1
PFDN1-206ENST00000514611 CTAGE5O15320 804 aa15.68■□□□□ 0.1
PFDN1-206ENST00000514611 EPHB4P54760 987 aa15.68■□□□□ 0.1
PFDN1-206ENST00000514611 BEX3Q00994 111 aa15.68■□□□□ 0.1
PFDN1-206ENST00000514611 FAAP100Q0VG06 881 aa15.68■□□□□ 0.1
PFDN1-206ENST00000514611 EEPD1Q7L9B9 569 aa15.68■□□□□ 0.1
PFDN1-206ENST00000514611 ANKRD33Q7Z3H0 272 aa15.68■□□□□ 0.1
PFDN1-206ENST00000514611 GLT1D1Q96MS3 346 aa15.68■□□□□ 0.1
PFDN1-206ENST00000514611 SPC25Q9HBM1 224 aa15.68■□□□□ 0.1
PFDN1-206ENST00000514611 DIAPH3Q9NSV4 1193 aa15.68■□□□□ 0.1
PFDN1-206ENST00000514611 TMEM39AQ9NV64 488 aa15.68■□□□□ 0.1
PFDN1-206ENST00000514611 LCTP09848 1927 aa15.67■□□□□ 0.1
PFDN1-206ENST00000514611 ASB14A6NK59 587 aa15.67■□□□□ 0.1
PFDN1-206ENST00000514611 KIAA0355O15063 1070 aa15.67■□□□□ 0.1
PFDN1-206ENST00000514611 PCP11498 1178 aaKnown RBP15.67■□□□□ 0.1
PFDN1-206ENST00000514611 RAG1P15918 1043 aa15.67■□□□□ 0.1
PFDN1-206ENST00000514611 MFAP1P55081 439 aaKnown RBP15.67■□□□□ 0.1
PFDN1-206ENST00000514611 TNFAIP2Q03169 654 aa15.67■□□□□ 0.1
PFDN1-206ENST00000514611 TMEM63BQ5T3F8 832 aa15.67■□□□□ 0.1
PFDN1-206ENST00000514611 TLK2Q86UE8 772 aa15.67■□□□□ 0.1
PFDN1-206ENST00000514611 FAM161BQ96MY7 647 aa15.67■□□□□ 0.1
PFDN1-206ENST00000514611 RNF41Q9H4P4 317 aaPredicted RBP15.67■□□□□ 0.1
PFDN1-206ENST00000514611 PDGFCQ9NRA1 345 aa15.67■□□□□ 0.1
PFDN1-206ENST00000514611 GNEQ9Y223 722 aaKnown RBP15.67■□□□□ 0.1
PFDN1-206ENST00000514611 LAMA4Q16363 1823 aa15.66■□□□□ 0.1
PFDN1-206ENST00000514611 ZNF213O14771 459 aa15.66■□□□□ 0.1
PFDN1-206ENST00000514611 SNHG28P0DPA3 235 aa15.66■□□□□ 0.1
PFDN1-206ENST00000514611 ZNF543Q08ER8 600 aa15.66■□□□□ 0.1
PFDN1-206ENST00000514611 BAATQ14032 418 aaPredicted RBP15.66■□□□□ 0.1
PFDN1-206ENST00000514611 GNASQ5JWF2 1037 aa15.66■□□□□ 0.1
PFDN1-206ENST00000514611 SLC30A10Q6XR72 485 aa15.66■□□□□ 0.1
PFDN1-206ENST00000514611 NOL8Q76FK4 1167 aaKnown RBP15.66■□□□□ 0.1
PFDN1-206ENST00000514611 PCSK9Q8NBP7 692 aaKnown RBP15.66■□□□□ 0.1
PFDN1-206ENST00000514611 ESR2Q92731 530 aa15.66■□□□□ 0.1
PFDN1-206ENST00000514611 TOX2Q96NM4 488 aa15.66■□□□□ 0.1
PFDN1-206ENST00000514611 GUCD1Q96NT3 240 aa15.66■□□□□ 0.1
PFDN1-206ENST00000514611 IL25Q9H293 177 aa15.66■□□□□ 0.1
PFDN1-206ENST00000514611 CPVLQ9H3G5 476 aa15.66■□□□□ 0.1
PFDN1-206ENST00000514611 ELP1O95163 1332 aa15.66■□□□□ 0.1
PFDN1-206ENST00000514611 A0A0U1RQG5 324 aaPredicted RBP15.65■□□□□ 0.1
PFDN1-206ENST00000514611 DCDC2CA8MYV0 355 aa15.65■□□□□ 0.1
PFDN1-206ENST00000514611 GOLGA8HP0CJ92 632 aa15.65■□□□□ 0.1
PFDN1-206ENST00000514611 SMPD1P17405 629 aa15.65■□□□□ 0.1
PFDN1-206ENST00000514611 NKX3-2P78367 333 aa15.65■□□□□ 0.1
PFDN1-206ENST00000514611 TAPT1Q6NXT6 567 aa15.65■□□□□ 0.1
PFDN1-206ENST00000514611 CLEC4DQ8WXI8 215 aa15.65■□□□□ 0.1
PFDN1-206ENST00000514611 VTI1AQ96AJ9 217 aa15.65■□□□□ 0.1
PFDN1-206ENST00000514611 TTC14Q96N46 770 aa15.65■□□□□ 0.1
PFDN1-206ENST00000514611 TBX21Q9UL17 535 aa15.65■□□□□ 0.1
PFDN1-206ENST00000514611 STXBP5LQ9Y2K9 1186 aa15.65■□□□□ 0.1
PFDN1-206ENST00000514611 SUPT16HQ9Y5B9 1047 aaKnown RBP15.65■□□□□ 0.1
PFDN1-206ENST00000514611 PTPDC1A2A3K4 754 aa15.64■□□□□ 0.09
PFDN1-206ENST00000514611 B4E1Z4 1266 aa15.64■□□□□ 0.09
PFDN1-206ENST00000514611 KDM4AO75164 1064 aa15.64■□□□□ 0.09
PFDN1-206ENST00000514611 GSPT1P15170 499 aaKnown RBP15.64■□□□□ 0.09
PFDN1-206ENST00000514611 PDE4AP27815 886 aa15.64■□□□□ 0.09
PFDN1-206ENST00000514611 CDK7P50613 346 aa15.64■□□□□ 0.09
PFDN1-206ENST00000514611 ALDH5A1P51649 535 aaPredicted RBP15.64■□□□□ 0.09
PFDN1-206ENST00000514611 FPGSQ05932 587 aa15.64■□□□□ 0.09
PFDN1-206ENST00000514611 CXCL17Q6UXB2 119 aa15.64■□□□□ 0.09
PFDN1-206ENST00000514611 FAM126BQ8IXS8 530 aa15.64■□□□□ 0.09
PFDN1-206ENST00000514611 SLC17A8Q8NDX2 589 aa15.64■□□□□ 0.09
PFDN1-206ENST00000514611 RNPC3Q96LT9 517 aaKnown RBP15.64■□□□□ 0.09
PFDN1-206ENST00000514611 MROH7Q68CQ1 1323 aa15.64■□□□□ 0.09
PFDN1-206ENST00000514611 UNC80Q8N2C7 3258 aa15.63■□□□□ 0.09
PFDN1-206ENST00000514611 ARVCFO00192 962 aa15.63■□□□□ 0.09
PFDN1-206ENST00000514611 HIP1O00291 1037 aa15.63■□□□□ 0.09
PFDN1-206ENST00000514611 DYNC1LI2O43237 492 aaPredicted RBP15.63■□□□□ 0.09
PFDN1-206ENST00000514611 CALML3P27482 149 aa15.63■□□□□ 0.09
PFDN1-206ENST00000514611 FSCN1Q16658 493 aaKnown RBP15.63■□□□□ 0.09
PFDN1-206ENST00000514611 ZNF697Q5TEC3 545 aa15.63■□□□□ 0.09
PFDN1-206ENST00000514611 FAM109BQ6ICB4 259 aaPredicted RBP15.63■□□□□ 0.09
PFDN1-206ENST00000514611 MORC4Q8TE76 937 aa15.63■□□□□ 0.09
PFDN1-206ENST00000514611 DSCC1Q9BVC3 393 aa15.63■□□□□ 0.09
PFDN1-206ENST00000514611 VTA1Q9NP79 307 aa15.63■□□□□ 0.09
PFDN1-206ENST00000514611 TIMP1P01033 207 aa15.62■□□□□ 0.09
PFDN1-206ENST00000514611 IRX6P78412 446 aaPredicted RBP15.62■□□□□ 0.09
PFDN1-206ENST00000514611 USH1GQ495M9 461 aa15.62■□□□□ 0.09
PFDN1-206ENST00000514611 GPATCH4Q5T3I0 446 aaKnown RBP15.62■□□□□ 0.09
PFDN1-206ENST00000514611 RNF207Q6ZRF8 634 aa15.62■□□□□ 0.09
PFDN1-206ENST00000514611 KIAA1211Q6ZU35 1233 aa15.62■□□□□ 0.09
PFDN1-206ENST00000514611 IQCA1Q86XH1 822 aa15.62■□□□□ 0.09
PFDN1-206ENST00000514611 DGKHQ86XP1 1220 aa15.62■□□□□ 0.09
PFDN1-206ENST00000514611 PNMA1Q8ND90 353 aa15.62■□□□□ 0.09
PFDN1-206ENST00000514611 PPP1R12CQ9BZL4 782 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms