RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 TRAPPC10P48553 1259 aa22.54■■□□□ 1.2
SSBP2-218ENST00000514493 CST9Q5W186 159 aa22.54■■□□□ 1.2
SSBP2-218ENST00000514493 KRT25Q7Z3Z0 450 aa22.54■■□□□ 1.2
SSBP2-218ENST00000514493 KCNG4Q8TDN1 519 aa22.54■■□□□ 1.2
SSBP2-218ENST00000514493 PGBD1Q96JS3 809 aa22.54■■□□□ 1.2
SSBP2-218ENST00000514493 SLC38A10Q9HBR0 1119 aa22.54■■□□□ 1.2
SSBP2-218ENST00000514493 FDX1P10109 184 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 STK38Q15208 465 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 SF3A1Q15459 793 aaKnown RBP22.53■■□□□ 1.2
SSBP2-218ENST00000514493 CATSPERGQ6ZRH7 1159 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 C2orf69Q8N8R5 385 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 PSTPIP2Q9H939 334 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 ZNF536O15090 1300 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 MYPNQ86TC9 1320 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 USP17L15C9J2P7 530 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 USP17L13C9JLJ4 530 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 USP17L11C9JVI0 530 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 USP17L18D6R9N7 530 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 USP17L22D6RA61 530 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 USP17L17D6RBQ6 530 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 USP17L19D6RCP7 530 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 USP17L20D6RJB6 530 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 ICAM1P05362 532 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 TAL1P17542 331 aaPredicted RBP22.53■■□□□ 1.2
SSBP2-218ENST00000514493 CLK2P49760 499 aaKnown RBP22.53■■□□□ 1.2
SSBP2-218ENST00000514493 MRPL12P52815 198 aaKnown RBP22.53■■□□□ 1.2
SSBP2-218ENST00000514493 USP17L24Q0WX57 530 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 ZSCAN23Q3MJ62 389 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 TPRNQ4KMQ1 711 aa22.53■■□□□ 1.2
SSBP2-218ENST00000514493 ABCB11O95342 1321 aa22.52■■□□□ 1.2
SSBP2-218ENST00000514493 GJA5P36382 358 aa22.52■■□□□ 1.2
SSBP2-218ENST00000514493 HTRA3P83110 453 aa22.52■■□□□ 1.2
SSBP2-218ENST00000514493 ATG4CQ96DT6 458 aa22.52■■□□□ 1.2
SSBP2-218ENST00000514493 SLC10A4Q96EP9 437 aa22.52■■□□□ 1.2
SSBP2-218ENST00000514493 DSG3P32926 999 aa22.51■■□□□ 1.19
SSBP2-218ENST00000514493 ME1P48163 572 aa22.51■■□□□ 1.19
SSBP2-218ENST00000514493 PTPAQ15257 358 aa22.51■■□□□ 1.19
SSBP2-218ENST00000514493 TREML2Q5T2D2 321 aa22.51■■□□□ 1.19
SSBP2-218ENST00000514493 GADL1Q6ZQY3 521 aa22.51■■□□□ 1.19
SSBP2-218ENST00000514493 TEX2Q8IWB9 1127 aa22.51■■□□□ 1.19
SSBP2-218ENST00000514493 BIN2Q9UBW5 565 aaPredicted RBP22.51■■□□□ 1.19
SSBP2-218ENST00000514493 PCDHB6Q9Y5E3 794 aa22.51■■□□□ 1.19
SSBP2-218ENST00000514493 VWA5AO00534 786 aa22.5■■□□□ 1.19
SSBP2-218ENST00000514493 OPLAHO14841 1288 aa22.5■■□□□ 1.19
SSBP2-218ENST00000514493 SPTLC2O15270 562 aa22.5■■□□□ 1.19
SSBP2-218ENST00000514493 COG2Q14746 738 aa22.5■■□□□ 1.19
SSBP2-218ENST00000514493 SLC39A14Q15043 492 aa22.5■■□□□ 1.19
SSBP2-218ENST00000514493 NONOQ15233 471 aaKnown RBP eCLIP22.5■■□□□ 1.196e-7■■■■□ 25.1
SSBP2-218ENST00000514493 UBE2SQ16763 222 aa22.5■■□□□ 1.19
SSBP2-218ENST00000514493 TTC38Q5R3I4 469 aa22.5■■□□□ 1.19
SSBP2-218ENST00000514493 JAKMIP3Q5VZ66 844 aa22.5■■□□□ 1.19
SSBP2-218ENST00000514493 PNMA2Q9UL42 364 aa22.5■■□□□ 1.19
SSBP2-218ENST00000514493 CCPG1Q9ULG6 757 aa22.5■■□□□ 1.19
SSBP2-218ENST00000514493 ADAMTS5Q9UNA0 930 aa22.5■■□□□ 1.19
SSBP2-218ENST00000514493 ZBED4O75132 1171 aa22.5■■□□□ 1.19
SSBP2-218ENST00000514493 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.5■■□□□ 1.19
SSBP2-218ENST00000514493 TMEM260Q9NX78 707 aa22.5■■□□□ 1.19
SSBP2-218ENST00000514493 MRPL11Q9Y3B7 192 aaKnown RBP22.5■■□□□ 1.19
SSBP2-218ENST00000514493 WNT7AO00755 349 aa22.49■■□□□ 1.19
SSBP2-218ENST00000514493 ATP2B1P20020 1258 aa22.49■■□□□ 1.19
SSBP2-218ENST00000514493 ZNF445P59923 1031 aa22.49■■□□□ 1.19
SSBP2-218ENST00000514493 INF2Q27J81 1249 aa22.49■■□□□ 1.19
SSBP2-218ENST00000514493 CCDC183Q5T5S1 534 aa22.49■■□□□ 1.19
SSBP2-218ENST00000514493 REPS2Q8NFH8 660 aa22.49■■□□□ 1.19
SSBP2-218ENST00000514493 WNK4Q96J92 1243 aa22.49■■□□□ 1.19
SSBP2-218ENST00000514493 CEP131Q9UPN4 1083 aa22.49■■□□□ 1.19
SSBP2-218ENST00000514493 AGTPBP1Q9UPW5 1226 aa22.49■■□□□ 1.19
SSBP2-218ENST00000514493 MORC2Q9Y6X9 1032 aaPredicted RBP22.49■■□□□ 1.19
SSBP2-218ENST00000514493 SPDYE16A6NNV3 312 aaPredicted RBP22.48■■□□□ 1.19
SSBP2-218ENST00000514493 MEIS2O14770 477 aa22.48■■□□□ 1.19
SSBP2-218ENST00000514493 BMP15O95972 392 aa22.48■■□□□ 1.19
SSBP2-218ENST00000514493 HOXA7P31268 230 aaPredicted RBP22.48■■□□□ 1.19
SSBP2-218ENST00000514493 SNAPC2Q13487 334 aa22.48■■□□□ 1.19
SSBP2-218ENST00000514493 MOGSQ13724 837 aa22.48■■□□□ 1.19
SSBP2-218ENST00000514493 AGBL1Q96MI9 1066 aa22.48■■□□□ 1.19
SSBP2-218ENST00000514493 CTDP1Q9Y5B0 961 aaPredicted RBP22.48■■□□□ 1.19
SSBP2-218ENST00000514493 PIK3CDO00329 1044 aa22.48■■□□□ 1.19
SSBP2-218ENST00000514493 PPP6R2O75170 966 aa22.48■■□□□ 1.19
SSBP2-218ENST00000514493 OAZ1P54368 228 aa22.48■■□□□ 1.19
SSBP2-218ENST00000514493 AP3B2Q13367 1082 aa22.48■■□□□ 1.19
SSBP2-218ENST00000514493 USP17L6PQ6QN14 398 aa22.48■■□□□ 1.19
SSBP2-218ENST00000514493 FASTKD5Q7L8L6 764 aaKnown RBP22.48■■□□□ 1.19
SSBP2-218ENST00000514493 JMYQ8N9B5 988 aa22.48■■□□□ 1.19
SSBP2-218ENST00000514493 RAVER2Q9HCJ3 691 aaKnown RBP22.48■■□□□ 1.19
SSBP2-218ENST00000514493 PCDHA7Q9UN72 937 aa22.48■■□□□ 1.19
SSBP2-218ENST00000514493 LIG1P18858 919 aa22.47■■□□□ 1.19
SSBP2-218ENST00000514493 ADALQ6DHV7 355 aa22.47■■□□□ 1.19
SSBP2-218ENST00000514493 MCTP2Q6DN12 878 aa22.47■■□□□ 1.19
SSBP2-218ENST00000514493 CPXCR1Q8N123 301 aa22.47■■□□□ 1.19
SSBP2-218ENST00000514493 HOXC10Q9NYD6 342 aa22.47■■□□□ 1.19
SSBP2-218ENST00000514493 A0A1W2PQ27 194 aa22.46■■□□□ 1.19
SSBP2-218ENST00000514493 A0A1W2PQ64 194 aa22.46■■□□□ 1.19
SSBP2-218ENST00000514493 A0A1W2PQD8 194 aa22.46■■□□□ 1.19
SSBP2-218ENST00000514493 APLP1P51693 650 aa22.46■■□□□ 1.19
SSBP2-218ENST00000514493 NEK8Q86SG6 692 aa22.46■■□□□ 1.19
SSBP2-218ENST00000514493 TBCKQ8TEA7 893 aa22.46■■□□□ 1.19
SSBP2-218ENST00000514493 ANO3Q9BYT9 981 aa22.45■■□□□ 1.19
SSBP2-218ENST00000514493 ZNF214Q9UL59 606 aaPredicted RBP22.45■■□□□ 1.19
SSBP2-218ENST00000514493 ATP2A1O14983 1001 aa22.45■■□□□ 1.18
SSBP2-218ENST00000514493 MARCKSP29966 332 aaPredicted RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms