RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 C15orf41Q9Y2V0 281 aa9.76□□□□□ -0.85
GPBP1-208ENST00000514387 PCDHGC5Q9Y5F6 944 aa9.76□□□□□ -0.85
GPBP1-208ENST00000514387 GMEB1Q9Y692 573 aa9.76□□□□□ -0.85
GPBP1-208ENST00000514387 SLC30A1Q9Y6M5 507 aa9.76□□□□□ -0.85
GPBP1-208ENST00000514387 MST1RQ04912 1400 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 GOLGA6L10A0A0M3HER8 536 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 DDX58O95786 925 aaKnown RBP9.75□□□□□ -0.85
GPBP1-208ENST00000514387 FERP16591 822 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 MEA1Q16626 185 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 AGBL2Q5U5Z8 902 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 CACNA2D3Q8IZS8 1091 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 SPDL1Q96EA4 605 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 LRRC2Q9BYS8 371 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 NOP53Q9NZM5 478 aaKnown RBP9.75□□□□□ -0.85
GPBP1-208ENST00000514387 SNX12Q9UMY4 172 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 PA2G4Q9UQ80 394 aaKnown RBP9.75□□□□□ -0.85
GPBP1-208ENST00000514387 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.75□□□□□ -0.85
GPBP1-208ENST00000514387 COMMD10Q9Y6G5 202 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 CPDO75976 1380 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 GOLGA6L10A6NI86 522 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 CREB3O43889 395 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 ATP6V1G2O95670 118 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 IDO1P14902 403 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 KRT9P35527 623 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 SCTRP47872 440 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 ARMC3Q5W041 872 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 MSL1Q68DK7 614 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 IL17REQ8NFR9 667 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 CNKSR1Q969H4 720 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 CENPTQ96BT3 561 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 SCLT1Q96NL6 688 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 ZIM3Q96PE6 472 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 NUP88Q99567 741 aaPredicted RBP9.75□□□□□ -0.85
GPBP1-208ENST00000514387 DNAJC5Q9H3Z4 198 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 NOD2Q9HC29 1040 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 SENP2Q9HC62 589 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 GPR108Q9NPR9 543 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 INCENPQ9NQS7 918 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 ITGB1BP2Q9UKP3 347 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 N6AMT1Q9Y5N5 214 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 PARP4Q9UKK3 1724 aaKnown RBP9.75□□□□□ -0.85
GPBP1-208ENST00000514387 TMEM94Q12767 1356 aa9.75□□□□□ -0.85
GPBP1-208ENST00000514387 USP6P35125 1406 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 TACC1O75410 805 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 SMNDC1O75940 238 aaKnown RBP eCLIP9.74□□□□□ -0.855e-8■■■□□ 15.6
GPBP1-208ENST00000514387 TRIM37O94972 964 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 CCDC159P0C7I6 412 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 PAFAH1B1P43034 410 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 CCNG1P51959 295 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 BTG3Q14201 252 aaPredicted RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 SEPT2Q15019 361 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 RILPL1Q5EBL4 403 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 CMPK2Q5EBM0 449 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 RRP12Q5JTH9 1297 aaKnown RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 MIS18BP1Q6P0N0 1132 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 RUFY4Q6ZNE9 571 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 SH3RF1Q7Z6J0 888 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 ACSBG1Q96GR2 724 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 MED15Q96RN5 788 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 SENP7Q9BQF6 1050 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 ALG1Q9BT22 464 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 GDF3Q9NR23 364 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 REXO2Q9Y3B8 237 aaKnown RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 ACTN4O43707 911 aaKnown RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 BMP15O95972 392 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 PDHBP11177 359 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 COPB1P53618 953 aaKnown RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 CTAG1AP78358 180 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 PHEXP78562 749 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 ITGB3BPQ13352 177 aaPredicted RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 KRT40Q6A162 431 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 SPDYE1Q8NFV5 336 aaPredicted RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 CPLX3Q8WVH0 158 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 ATRIPQ8WXE1 791 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 RBM41Q96IZ5 413 aaKnown RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 ALS2CR12Q96Q35 445 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 MAK16Q9BXY0 300 aaKnown RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 RWDD2AQ9UIY3 292 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 CAPN11Q9UMQ6 739 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 HPS5Q9UPZ3 1129 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 SRPRBQ9Y5M8 271 aaKnown RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 ABCC12Q96J65 1359 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 NFAT5O94916 1531 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 A0A0U1RQJ8 604 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 IFIT3O14879 490 aaKnown RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 N4BP3O15049 544 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 TRAPPC3O43617 180 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 BUB1BO60566 1050 aaPredicted RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 ALADP13716 330 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 HDAC4P56524 1084 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 ELF3P78545 371 aaPredicted RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 TNNI3KQ59H18 835 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 BZW1Q7L1Q6 419 aaKnown RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 TTC30AQ86WT1 665 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 METTL14Q9HCE5 456 aaKnown RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 DNAAF2Q9NVR5 837 aaKnown RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 ITM2BQ9Y287 266 aa9.74□□□□□ -0.85
GPBP1-208ENST00000514387 LUC7L2Q9Y383 392 aaKnown RBP9.74□□□□□ -0.85
GPBP1-208ENST00000514387 HYOU1Q9Y4L1 999 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms