RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 TRIML1Q8N9V2 468 aa10.75□□□□□ -0.69
VCAN-210ENST00000513960 OR8K1Q8NGG5 319 aa10.75□□□□□ -0.69
VCAN-210ENST00000513960 CD248Q9HCU0 757 aa10.75□□□□□ -0.69
VCAN-210ENST00000513960 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.75□□□□□ -0.69
VCAN-210ENST00000513960 TRIM49BA6NDI0 452 aa10.75□□□□□ -0.69
VCAN-210ENST00000513960 GOLGA6L10A6NI86 522 aa10.75□□□□□ -0.69
VCAN-210ENST00000513960 KRT83P78385 493 aa10.75□□□□□ -0.69
VCAN-210ENST00000513960 E2F5Q15329 346 aa10.75□□□□□ -0.69
VCAN-210ENST00000513960 CFAP58Q5T655 872 aa10.75□□□□□ -0.69
VCAN-210ENST00000513960 TBC1D9BQ66K14 1250 aa10.75□□□□□ -0.69
VCAN-210ENST00000513960 CCDC51Q96ER9 411 aa10.75□□□□□ -0.69
VCAN-210ENST00000513960 PAGE5Q96GU1 130 aa10.75□□□□□ -0.69
VCAN-210ENST00000513960 HAUS4Q9H6D7 363 aa10.75□□□□□ -0.69
VCAN-210ENST00000513960 CHD4Q14839 1912 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 ROBO1Q9Y6N7 1651 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 TSPY2A6NKD2 308 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 AKR1B10O60218 316 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 DDAH1O94760 285 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 NLRP5P59047 1200 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 MDM2Q00987 491 aaPredicted RBP10.74□□□□□ -0.69
VCAN-210ENST00000513960 MECOMQ03112 1051 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 SPAG1Q07617 926 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 MICALCLQ6ZW33 695 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 CCDC42Q96M95 316 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 GDAQ9Y2T3 454 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 DOCK2Q92608 1830 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 TIAM2Q8IVF5 1701 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 RNF225M0QZC1 329 aaPredicted RBP10.74□□□□□ -0.69
VCAN-210ENST00000513960 TPTE2Q6XPS3 522 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 FBXO33Q7Z6M2 555 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 DZIP1Q86YF9 867 aaKnown RBP10.74□□□□□ -0.69
VCAN-210ENST00000513960 EHBP1Q8NDI1 1231 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 NSUN4Q96CB9 384 aaKnown RBP10.74□□□□□ -0.69
VCAN-210ENST00000513960 CABS1Q96KC9 395 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 EHD2Q9NZN4 543 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 TTC26A0AVF1 554 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 E7EVH7 732 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 USO1O60763 962 aaKnown RBP10.74□□□□□ -0.69
VCAN-210ENST00000513960 TDRD12Q587J7 1177 aaKnown RBP10.74□□□□□ -0.69
VCAN-210ENST00000513960 FAM47AQ5JRC9 791 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 C8orf74Q6P047 294 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 B4GALNT4Q76KP1 1039 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 FERMT2Q96AC1 680 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 PHF20Q9BVI0 1012 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 TANGO6Q9C0B7 1094 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 SUFUQ9UMX1 484 aa10.74□□□□□ -0.69
VCAN-210ENST00000513960 COL16A1Q07092 1604 aaPredicted RBP10.73□□□□□ -0.69
VCAN-210ENST00000513960 ESYT3A0FGR9 886 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 TROAPQ12815 778 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 PKN1Q16512 942 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 PTPROQ16827 1216 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 SLC4A8Q2Y0W8 1093 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 SMIM5Q71RC9 77 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 CCDC24Q8N4L8 307 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 MED15Q96RN5 788 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 ATP8A2Q9NTI2 1148 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 BACH1O14867 736 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 TACC1O75410 805 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 PDE6BP35913 854 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 SLC10A5Q5PT55 438 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 TTC38Q5R3I4 469 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 TMTC3Q6ZXV5 915 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 CCDC43Q96MW1 224 aaKnown RBP10.73□□□□□ -0.69
VCAN-210ENST00000513960 JAG2Q9Y219 1238 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 DUSP10Q9Y6W6 482 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 MYH14Q7Z406 1995 aaKnown RBP10.73□□□□□ -0.69
VCAN-210ENST00000513960 KIF5BP33176 963 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 STAT6P42226 847 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 GUCY1A3Q02108 690 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 TBC1D8BQ0IIM8 1120 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 PPP2R5AQ15172 486 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 SPTY2D1Q68D10 685 aaPredicted RBP10.73□□□□□ -0.69
VCAN-210ENST00000513960 TYW1BQ6NUM6 668 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 CCDC121Q6ZUS5 278 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 N4BP2L2Q92802 583 aaPredicted RBP10.73□□□□□ -0.69
VCAN-210ENST00000513960 ARL8AQ96BM9 186 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 LRRC1Q9BTT6 524 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 DCP1AQ9NPI6 582 aaPredicted RBP10.73□□□□□ -0.69
VCAN-210ENST00000513960 MCM9Q9NXL9 1143 aa10.73□□□□□ -0.69
VCAN-210ENST00000513960 ARPP21Q9UBL0 812 aaPredicted RBP10.73□□□□□ -0.69
VCAN-210ENST00000513960 B4DLN1 442 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 GNPATO15228 680 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 ACTN4O43707 911 aaKnown RBP10.72□□□□□ -0.69
VCAN-210ENST00000513960 RPS6KA5O75582 802 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 KLRK1P26718 216 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 PRDX5P30044 214 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 ARHGAP25P42331 645 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 NT5DC1Q5TFE4 455 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 AMOTL1Q8IY63 956 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 MYO1AQ9UBC5 1043 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 SRP68Q9UHB9 627 aaKnown RBP10.72□□□□□ -0.69
VCAN-210ENST00000513960 EIF3HO15372 352 aaKnown RBP eCLIP10.72□□□□□ -0.69
VCAN-210ENST00000513960 NEBLO76041 1014 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 KRT14P02533 472 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 RPSAP08865 295 aaKnown RBP10.72□□□□□ -0.69
VCAN-210ENST00000513960 VAV2P52735 878 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 APBA1Q02410 837 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 NNTQ13423 1086 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 NAA25Q14CX7 972 aa10.72□□□□□ -0.69
VCAN-210ENST00000513960 CEP85LQ5SZL2 805 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms