RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 ADGRF1Q5T601 910 aa9.4□□□□□ -0.9
TRAPPC11-210ENST00000513600 SYDE1Q6ZW31 735 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC11-210ENST00000513600 NUP43Q8NFH3 380 aa9.4□□□□□ -0.9
TRAPPC11-210ENST00000513600 HNRNPLLQ8WVV9 542 aaKnown RBP9.4□□□□□ -0.9
TRAPPC11-210ENST00000513600 IMPACTQ9P2X3 320 aa9.4□□□□□ -0.9
TRAPPC11-210ENST00000513600 SUSD5O60279 629 aa9.39□□□□□ -0.91
TRAPPC11-210ENST00000513600 PEX10O60683 326 aa9.39□□□□□ -0.91
TRAPPC11-210ENST00000513600 KCNH1O95259 989 aa9.39□□□□□ -0.91
TRAPPC11-210ENST00000513600 CYP4F8P98187 520 aa9.39□□□□□ -0.91
TRAPPC11-210ENST00000513600 SV2CQ496J9 727 aa9.39□□□□□ -0.91
TRAPPC11-210ENST00000513600 TRIM59Q8IWR1 403 aa9.39□□□□□ -0.91
TRAPPC11-210ENST00000513600 MICAL1Q8TDZ2 1067 aa9.39□□□□□ -0.91
TRAPPC11-210ENST00000513600 KRTAP9-6A0A140TA67 174 aa9.38□□□□□ -0.91
TRAPPC11-210ENST00000513600 GJB6O95452 261 aa9.38□□□□□ -0.91
TRAPPC11-210ENST00000513600 ERVFRD-1P60508 538 aa9.38□□□□□ -0.91
TRAPPC11-210ENST00000513600 EEPD1Q7L9B9 569 aa9.38□□□□□ -0.91
TRAPPC11-210ENST00000513600 ZNF605Q86T29 641 aa9.38□□□□□ -0.91
TRAPPC11-210ENST00000513600 MRGPRX3Q96LB0 322 aa9.38□□□□□ -0.91
TRAPPC11-210ENST00000513600 EPN3Q9H201 632 aa9.38□□□□□ -0.91
TRAPPC11-210ENST00000513600 TRBV23OR9-2A0A075B6M9 112 aa9.37□□□□□ -0.91
TRAPPC11-210ENST00000513600 HRKO00198 91 aa9.37□□□□□ -0.91
TRAPPC11-210ENST00000513600 KLF4O43474 513 aa9.37□□□□□ -0.91
TRAPPC11-210ENST00000513600 STK10O94804 968 aaKnown RBP9.37□□□□□ -0.91
TRAPPC11-210ENST00000513600 CORO7P57737 925 aa9.37□□□□□ -0.91
TRAPPC11-210ENST00000513600 KIR3DS1Q14943 382 aa9.37□□□□□ -0.91
TRAPPC11-210ENST00000513600 KCNK12Q9HB15 430 aa9.37□□□□□ -0.91
TRAPPC11-210ENST00000513600 LRP2BPQ9P2M1 347 aa9.37□□□□□ -0.91
TRAPPC11-210ENST00000513600 MPOP05164 745 aa9.36□□□□□ -0.91
TRAPPC11-210ENST00000513600 TMEM253P0C7T8 217 aa9.36□□□□□ -0.91
TRAPPC11-210ENST00000513600 L1CAMP32004 1257 aa9.36□□□□□ -0.91
TRAPPC11-210ENST00000513600 MVKQ03426 396 aa9.36□□□□□ -0.91
TRAPPC11-210ENST00000513600 DDR2Q16832 855 aa9.36□□□□□ -0.91
TRAPPC11-210ENST00000513600 GTF2IRD2BQ6EKJ0 949 aa9.36□□□□□ -0.91
TRAPPC11-210ENST00000513600 MRM1Q6IN84 353 aaKnown RBP9.36□□□□□ -0.91
TRAPPC11-210ENST00000513600 GTF2IRD2Q86UP8 949 aa9.36□□□□□ -0.91
TRAPPC11-210ENST00000513600 KRTAP19-1Q8IUB9 90 aa9.36□□□□□ -0.91
TRAPPC11-210ENST00000513600 CELF2-AS1Q8N7Q2 184 aa9.36□□□□□ -0.91
TRAPPC11-210ENST00000513600 NLGN2Q8NFZ4 835 aa9.36□□□□□ -0.91
TRAPPC11-210ENST00000513600 TANGO6Q9C0B7 1094 aa9.36□□□□□ -0.91
TRAPPC11-210ENST00000513600 NFIBO00712 420 aa9.35□□□□□ -0.91
TRAPPC11-210ENST00000513600 ABLIM1O14639 778 aa9.35□□□□□ -0.91
TRAPPC11-210ENST00000513600 TSPAN15O95858 294 aa9.35□□□□□ -0.91
TRAPPC11-210ENST00000513600 PAMP19021 973 aa9.35□□□□□ -0.91
TRAPPC11-210ENST00000513600 ATP2B1P20020 1258 aa9.35□□□□□ -0.91
TRAPPC11-210ENST00000513600 RBM10P98175 930 aaKnown RBP9.35□□□□□ -0.91
TRAPPC11-210ENST00000513600 ZNF124Q15973 351 aa9.35□□□□□ -0.91
TRAPPC11-210ENST00000513600 OLFML2BQ68BL8 750 aa9.35□□□□□ -0.91
TRAPPC11-210ENST00000513600 COPS5Q92905 334 aa9.35□□□□□ -0.91
TRAPPC11-210ENST00000513600 KCNN1Q92952 543 aa9.35□□□□□ -0.91
TRAPPC11-210ENST00000513600 PDLIM7Q9NR12 457 aa9.35□□□□□ -0.91
TRAPPC11-210ENST00000513600 CYP26B1Q9NR63 512 aa9.35□□□□□ -0.91
TRAPPC11-210ENST00000513600 ST7Q9NRC1 585 aa9.35□□□□□ -0.91
TRAPPC11-210ENST00000513600 A0A1W2PQJ5 194 aa9.34□□□□□ -0.91
TRAPPC11-210ENST00000513600 ITGAVP06756 1048 aa9.34□□□□□ -0.91
TRAPPC11-210ENST00000513600 RAP1GAPP47736 663 aa9.34□□□□□ -0.91
TRAPPC11-210ENST00000513600 TMEM62Q0P6H9 643 aa9.34□□□□□ -0.91
TRAPPC11-210ENST00000513600 SCRN1Q12765 414 aa9.34□□□□□ -0.91
TRAPPC11-210ENST00000513600 RAB33AQ14088 237 aa9.34□□□□□ -0.91
TRAPPC11-210ENST00000513600 CKAP2LQ8IYA6 745 aa9.34□□□□□ -0.91
TRAPPC11-210ENST00000513600 TRIM55Q9BYV6 548 aa9.34□□□□□ -0.91
TRAPPC11-210ENST00000513600 MCOLN1Q9GZU1 580 aa9.34□□□□□ -0.91
TRAPPC11-210ENST00000513600 NKX2-4Q9H2Z4 354 aa9.34□□□□□ -0.91
TRAPPC11-210ENST00000513600 TNFRSF12AQ9NP84 129 aa9.34□□□□□ -0.91
TRAPPC11-210ENST00000513600 NPHP3-ACAD11A0A0J9YXS1 232 aa9.33□□□□□ -0.92
TRAPPC11-210ENST00000513600 TEX51A0A1B0GUA7 166 aa9.33□□□□□ -0.92
TRAPPC11-210ENST00000513600 MYOCOSA0A1B0GUC4 107 aa9.33□□□□□ -0.92
TRAPPC11-210ENST00000513600 AGRPO00253 132 aa9.33□□□□□ -0.92
TRAPPC11-210ENST00000513600 SEMA7AO75326 666 aa9.33□□□□□ -0.92
TRAPPC11-210ENST00000513600 MED14OSP0DP75 135 aa9.33□□□□□ -0.92
TRAPPC11-210ENST00000513600 YBX1P67809 324 aaKnown RBP9.33□□□□□ -0.92
TRAPPC11-210ENST00000513600 TMEM132EQ6IEE7 984 aa9.33□□□□□ -0.92
TRAPPC11-210ENST00000513600 ZNF227Q86WZ6 799 aa9.33□□□□□ -0.92
TRAPPC11-210ENST00000513600 MSL3P1P0C860 447 aa9.32□□□□□ -0.92
TRAPPC11-210ENST00000513600 SDHBP21912 280 aa9.32□□□□□ -0.92
TRAPPC11-210ENST00000513600 GLDCP23378 1020 aa9.32□□□□□ -0.92
TRAPPC11-210ENST00000513600 HOXC12P31275 282 aa9.32□□□□□ -0.92
TRAPPC11-210ENST00000513600 BTN2A2Q8WVV5 523 aa9.32□□□□□ -0.92
TRAPPC11-210ENST00000513600 LGR4Q9BXB1 951 aa9.32□□□□□ -0.92
TRAPPC11-210ENST00000513600 PPP1R1BQ9UD71 204 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC11-210ENST00000513600 DBX1A6NMT0 343 aa9.31□□□□□ -0.92
TRAPPC11-210ENST00000513600 ETV2O00321 342 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC11-210ENST00000513600 C1QTNF9P0C862 333 aa9.31□□□□□ -0.92
TRAPPC11-210ENST00000513600 SRSF3P84103 164 aaKnown RBP9.31□□□□□ -0.92
TRAPPC11-210ENST00000513600 CBX2Q14781 532 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC11-210ENST00000513600 NR1I3Q14994 352 aa9.31□□□□□ -0.92
TRAPPC11-210ENST00000513600 RAB3GAP1Q15042 981 aa9.31□□□□□ -0.92
TRAPPC11-210ENST00000513600 SLC10A6Q3KNW5 377 aa9.31□□□□□ -0.92
TRAPPC11-210ENST00000513600 CPNE8Q86YQ8 564 aa9.31□□□□□ -0.92
TRAPPC11-210ENST00000513600 CCDC140Q96MF4 163 aa9.31□□□□□ -0.92
TRAPPC11-210ENST00000513600 GPRC5CQ9NQ84 441 aa9.31□□□□□ -0.92
TRAPPC11-210ENST00000513600 CLEC1BQ9P126 229 aa9.31□□□□□ -0.92
TRAPPC11-210ENST00000513600 KLHL14Q9P2G3 628 aa9.31□□□□□ -0.92
TRAPPC11-210ENST00000513600 U2SURPO15042 1029 aaKnown RBP9.3□□□□□ -0.92
TRAPPC11-210ENST00000513600 KRT1P04264 644 aa9.3□□□□□ -0.92
TRAPPC11-210ENST00000513600 PLS3P13797 630 aa9.3□□□□□ -0.92
TRAPPC11-210ENST00000513600 BICRALQ6AI39 1079 aa9.3□□□□□ -0.92
TRAPPC11-210ENST00000513600 ANKLE2Q86XL3 938 aa9.3□□□□□ -0.92
TRAPPC11-210ENST00000513600 ARMC5Q96C12 935 aa9.3□□□□□ -0.92
TRAPPC11-210ENST00000513600 MMP19Q99542 508 aa9.3□□□□□ -0.92
TRAPPC11-210ENST00000513600 SIRT5Q9NXA8 310 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms