RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 SEZ6LQ9BYH1 1024 aa12.61□□□□□ -0.39
CLDND1-227ENST00000513452 ALDH8A1Q9H2A2 487 aaPredicted RBP12.61□□□□□ -0.39
CLDND1-227ENST00000513452 TRMT13Q9NUP7 481 aaKnown RBP12.61□□□□□ -0.39
CLDND1-227ENST00000513452 DDX49Q9Y6V7 483 aaKnown RBP12.61□□□□□ -0.39
CLDND1-227ENST00000513452 ACTN1P12814 892 aa12.6□□□□□ -0.39
CLDND1-227ENST00000513452 SMPD1P17405 629 aa12.6□□□□□ -0.39
CLDND1-227ENST00000513452 DDRGK1Q96HY6 314 aa12.6□□□□□ -0.39
CLDND1-227ENST00000513452 SLC38A10Q9HBR0 1119 aa12.6□□□□□ -0.39
CLDND1-227ENST00000513452 IL1RAPL2Q9NP60 686 aa12.6□□□□□ -0.39
CLDND1-227ENST00000513452 EXOC6BQ9Y2D4 811 aa12.6□□□□□ -0.39
CLDND1-227ENST00000513452 GREB1LQ9C091 1923 aaPredicted RBP12.59□□□□□ -0.39
CLDND1-227ENST00000513452 F5H6K3 240 aa12.59□□□□□ -0.39
CLDND1-227ENST00000513452 LPXNO60711 386 aa12.59□□□□□ -0.39
CLDND1-227ENST00000513452 KLRC3Q07444 240 aa12.59□□□□□ -0.39
CLDND1-227ENST00000513452 HERC6Q8IVU3 1022 aa12.59□□□□□ -0.39
CLDND1-227ENST00000513452 FAM133AQ8N9E0 248 aa12.59□□□□□ -0.39
CLDND1-227ENST00000513452 GDPD5Q8WTR4 605 aa12.59□□□□□ -0.39
CLDND1-227ENST00000513452 SNX27Q96L92 541 aa12.59□□□□□ -0.39
CLDND1-227ENST00000513452 TNKSO95271 1327 aa12.59□□□□□ -0.39
CLDND1-227ENST00000513452 SOWAHBA6NEL2 793 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 ASB14A6NK59 587 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 KIF28PB7ZC32 967 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 SUPT20HL2P0C7V6 817 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 SSTR3P32745 418 aaPredicted RBP12.58□□□□□ -0.4
CLDND1-227ENST00000513452 NHLH1Q02575 133 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 SCN5AQ14524 2016 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 TMEM63BQ5T3F8 832 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 CTR9Q6PD62 1173 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 EEPD1Q7L9B9 569 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 ERC1Q8IUD2 1116 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 FBXO16Q8IX29 292 aaPredicted RBP12.58□□□□□ -0.4
CLDND1-227ENST00000513452 STK11IPQ8N1F8 1099 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 PHOSPHO2Q8TCD6 241 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 FTOQ9C0B1 505 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLDND1-227ENST00000513452 ACAD9Q9H845 621 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 PDGFCQ9NRA1 345 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 NYAP2Q9P242 653 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 SLC4A4Q9Y6R1 1079 aa12.58□□□□□ -0.4
CLDND1-227ENST00000513452 BRWD1Q9NSI6 2320 aa12.57□□□□□ -0.4
CLDND1-227ENST00000513452 CHGBP05060 677 aa12.57□□□□□ -0.4
CLDND1-227ENST00000513452 RASA1P20936 1047 aa12.57□□□□□ -0.4
CLDND1-227ENST00000513452 ADD2P35612 726 aa12.57□□□□□ -0.4
CLDND1-227ENST00000513452 OAZ1P54368 228 aa12.57□□□□□ -0.4
CLDND1-227ENST00000513452 CSPP1Q1MSJ5 1256 aa12.57□□□□□ -0.4
CLDND1-227ENST00000513452 FAM178BQ8IXR5 827 aa12.57□□□□□ -0.4
CLDND1-227ENST00000513452 GJD3Q8N144 294 aa12.57□□□□□ -0.4
CLDND1-227ENST00000513452 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
CLDND1-227ENST00000513452 UBE2ZQ9H832 354 aaPredicted RBP12.57□□□□□ -0.4
CLDND1-227ENST00000513452 A1CFQ9NQ94 594 aaKnown RBP12.57□□□□□ -0.4
CLDND1-227ENST00000513452 RNF146Q9NTX7 359 aa12.57□□□□□ -0.4
CLDND1-227ENST00000513452 FEM1BQ9UK73 627 aa12.57□□□□□ -0.4
CLDND1-227ENST00000513452 ISY1Q9ULR0 285 aaKnown RBP12.57□□□□□ -0.4
CLDND1-227ENST00000513452 COG6Q9Y2V7 657 aa12.57□□□□□ -0.4
CLDND1-227ENST00000513452 ZBED9Q6R2W3 1325 aa12.57□□□□□ -0.4
CLDND1-227ENST00000513452 LCHNA4D1U4 455 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 RFC2P35250 354 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 FAM47CQ5HY64 1035 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 IQSEC1Q6DN90 963 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 TAPT1Q6NXT6 567 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 CEP85Q6P2H3 762 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 ITPRIPQ8IWB1 547 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 LRRC47Q8N1G4 583 aaKnown RBP12.56□□□□□ -0.4
CLDND1-227ENST00000513452 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.56□□□□□ -0.4
CLDND1-227ENST00000513452 PPP1R13LQ8WUF5 828 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 PAG1Q9NWQ8 432 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 ARPP21Q9UBL0 812 aaPredicted RBP12.56□□□□□ -0.4
CLDND1-227ENST00000513452 CLIP2Q9UDT6 1046 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 MTUS1Q9ULD2 1270 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 Q9Y3F1 56 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 TANC1Q9C0D5 1861 aa12.56□□□□□ -0.4
CLDND1-227ENST00000513452 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
CLDND1-227ENST00000513452 MYL3P08590 195 aa12.55□□□□□ -0.4
CLDND1-227ENST00000513452 IL9P15248 144 aa12.55□□□□□ -0.4
CLDND1-227ENST00000513452 KCNA5P22460 613 aa12.55□□□□□ -0.4
CLDND1-227ENST00000513452 KCNJ6P48051 423 aa12.55□□□□□ -0.4
CLDND1-227ENST00000513452 TMCO2Q7Z6W1 182 aaPredicted RBP12.55□□□□□ -0.4
CLDND1-227ENST00000513452 RETREG2Q8NC44 543 aa12.55□□□□□ -0.4
CLDND1-227ENST00000513452 RHPN1Q8TCX5 695 aa12.55□□□□□ -0.4
CLDND1-227ENST00000513452 FBXL18Q96ME1 805 aa12.55□□□□□ -0.4
CLDND1-227ENST00000513452 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.55□□□□□ -0.4
CLDND1-227ENST00000513452 MKNK2Q9HBH9 465 aa12.55□□□□□ -0.4
CLDND1-227ENST00000513452 POLR3EQ9NVU0 708 aa12.55□□□□□ -0.4
CLDND1-227ENST00000513452 ZNF536O15090 1300 aa12.55□□□□□ -0.4
CLDND1-227ENST00000513452 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
CLDND1-227ENST00000513452 BAIAP3O94812 1187 aa12.54□□□□□ -0.4
CLDND1-227ENST00000513452 IQCF3P0C7M6 154 aa12.54□□□□□ -0.4
CLDND1-227ENST00000513452 ALADP13716 330 aa12.54□□□□□ -0.4
CLDND1-227ENST00000513452 PURAQ00577 322 aaKnown RBP12.54□□□□□ -0.4
CLDND1-227ENST00000513452 LEXMQ3ZCV2 418 aa12.54□□□□□ -0.4
CLDND1-227ENST00000513452 KIAA1211Q6ZU35 1233 aa12.54□□□□□ -0.4
CLDND1-227ENST00000513452 FTSJ3Q8IY81 847 aaKnown RBP12.54□□□□□ -0.4
CLDND1-227ENST00000513452 ZBED2Q9BTP6 218 aa12.54□□□□□ -0.4
CLDND1-227ENST00000513452 VTA1Q9NP79 307 aa12.54□□□□□ -0.4
CLDND1-227ENST00000513452 LMCD1Q9NZU5 365 aa12.54□□□□□ -0.4
CLDND1-227ENST00000513452 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.53□□□□□ -0.4
CLDND1-227ENST00000513452 TMEM232C9JQI7 657 aa12.53□□□□□ -0.4
CLDND1-227ENST00000513452 IFIT2P09913 472 aaKnown RBP12.53□□□□□ -0.4
CLDND1-227ENST00000513452 ALAS1P13196 640 aa12.53□□□□□ -0.4
CLDND1-227ENST00000513452 WDR5P61964 334 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms