RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 SRCIN1Q9C0H9 1055 aa5.54□□□□□ -1.52
PDLIM5-218ENST00000513341 CNOT11Q9UKZ1 510 aaKnown RBP5.54□□□□□ -1.52
PDLIM5-218ENST00000513341 MYRFQ9Y2G1 1151 aa5.54□□□□□ -1.52
PDLIM5-218ENST00000513341 ADGRB2O60241 1585 aa5.54□□□□□ -1.52
PDLIM5-218ENST00000513341 TNS1Q9HBL0 1735 aaKnown RBP5.54□□□□□ -1.52
PDLIM5-218ENST00000513341 NEXMIFQ5QGS0 1516 aa5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 KIF1AQ12756 1690 aa5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 ZC3H12DA2A288 527 aaKnown RBP5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 PAGE1O75459 146 aa5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 GSTT1P30711 240 aa5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 AFF3P51826 1226 aaKnown RBP5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 PRAMEF13Q5VWM6 474 aa5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 NXPE4Q6UWF7 544 aa5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 PI16Q6UXB8 463 aa5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 SHISA4Q96DD7 197 aa5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 Q96M66 194 aa5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 LUC7LQ9NQ29 371 aaKnown RBP5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 IRAK3Q9Y616 596 aa5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 TNS3Q68CZ2 1445 aa5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 ROCK1Q13464 1354 aa5.53□□□□□ -1.52
PDLIM5-218ENST00000513341 NAIPQ13075 1403 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 PRAMEF27A3QJZ7 478 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 PI3P19957 117 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 EGR3Q06889 387 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 RASIP1Q5U651 963 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 B4GALNT3Q6L9W6 998 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 FRMD5Q7Z6J6 570 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 TSPYL5Q86VY4 417 aaPredicted RBP5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 ANKS4BQ8N8V4 417 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 PLPPR2Q96GM1 343 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 SYT17Q9BSW7 474 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 SGPP1Q9BX95 441 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 GPATCH2Q9NW75 528 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 DUSP13Q9UII6 198 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 MBD1Q9UIS9 605 aaPredicted RBP5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 KIF1BO60333 1816 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 RREB1Q92766 1687 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 ABCC11Q96J66 1382 aa5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 COL14A1Q05707 1796 aaKnown RBP5.52□□□□□ -1.53
PDLIM5-218ENST00000513341 TECPR2O15040 1411 aa5.51□□□□□ -1.53
PDLIM5-218ENST00000513341 RRBP1Q9P2E9 1410 aaKnown RBP5.51□□□□□ -1.53
PDLIM5-218ENST00000513341 THSD7AQ9UPZ6 1657 aa5.51□□□□□ -1.53
PDLIM5-218ENST00000513341 OR14I1A6ND48 311 aa5.51□□□□□ -1.53
PDLIM5-218ENST00000513341 PDE6BP35913 854 aa5.51□□□□□ -1.53
PDLIM5-218ENST00000513341 ETF1P62495 437 aaKnown RBP5.51□□□□□ -1.53
PDLIM5-218ENST00000513341 FAM50AQ14320 339 aaKnown RBP5.51□□□□□ -1.53
PDLIM5-218ENST00000513341 CDH24Q86UP0 819 aa5.51□□□□□ -1.53
PDLIM5-218ENST00000513341 MRPL41Q8IXM3 137 aaKnown RBP5.51□□□□□ -1.53
PDLIM5-218ENST00000513341 ZNF281Q9Y2X9 895 aa5.51□□□□□ -1.53
PDLIM5-218ENST00000513341 NRAPQ86VF7 1730 aa5.51□□□□□ -1.53
PDLIM5-218ENST00000513341 SPATA31A1Q5TZJ5 1347 aa5.5□□□□□ -1.53
PDLIM5-218ENST00000513341 UTRNP46939 3433 aa5.5□□□□□ -1.53
PDLIM5-218ENST00000513341 WASH4PA8MWX3 477 aa5.5□□□□□ -1.53
PDLIM5-218ENST00000513341 IRS4O14654 1257 aaPredicted RBP5.5□□□□□ -1.53
PDLIM5-218ENST00000513341 N4BP3O15049 544 aa5.5□□□□□ -1.53
PDLIM5-218ENST00000513341 DUSP4Q13115 394 aa5.5□□□□□ -1.53
PDLIM5-218ENST00000513341 TPTE2Q6XPS3 522 aa5.5□□□□□ -1.53
PDLIM5-218ENST00000513341 WAPLQ7Z5K2 1190 aa5.5□□□□□ -1.53
PDLIM5-218ENST00000513341 FEZF2Q8TBJ5 459 aa5.5□□□□□ -1.53
PDLIM5-218ENST00000513341 PANK1Q8TE04 598 aa5.5□□□□□ -1.53
PDLIM5-218ENST00000513341 SYTL4Q96C24 671 aaPredicted RBP5.5□□□□□ -1.53
PDLIM5-218ENST00000513341 NUP188Q5SRE5 1749 aa5.5□□□□□ -1.53
PDLIM5-218ENST00000513341 CAMTA1Q9Y6Y1 1673 aa5.5□□□□□ -1.53
PDLIM5-218ENST00000513341 FMN2Q9NZ56 1722 aa5.49□□□□□ -1.53
PDLIM5-218ENST00000513341 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.49□□□□□ -1.53
PDLIM5-218ENST00000513341 DNAJB8Q8NHS0 232 aa5.49□□□□□ -1.53
PDLIM5-218ENST00000513341 TMC1Q8TDI8 760 aa5.49□□□□□ -1.53
PDLIM5-218ENST00000513341 LINC01599Q8WXQ3 324 aa5.49□□□□□ -1.53
PDLIM5-218ENST00000513341 GAL3ST3Q96A11 431 aa5.49□□□□□ -1.53
PDLIM5-218ENST00000513341 EPB41L4AQ9HCS5 686 aaPredicted RBP5.49□□□□□ -1.53
PDLIM5-218ENST00000513341 THRAP3Q9Y2W1 955 aaKnown RBP5.49□□□□□ -1.53
PDLIM5-218ENST00000513341 NRXN1Q9ULB1 1477 aa5.49□□□□□ -1.53
PDLIM5-218ENST00000513341 MAP3K5Q99683 1374 aa5.48□□□□□ -1.53
PDLIM5-218ENST00000513341 SERPINB4P48594 390 aa5.48□□□□□ -1.53
PDLIM5-218ENST00000513341 CAP1Q01518 475 aa5.48□□□□□ -1.53
PDLIM5-218ENST00000513341 PTPN11Q06124 597 aaPredicted RBP5.48□□□□□ -1.53
PDLIM5-218ENST00000513341 PCNX4Q63HM2 1172 aa5.48□□□□□ -1.53
PDLIM5-218ENST00000513341 SLC6A19Q695T7 634 aa5.48□□□□□ -1.53
PDLIM5-218ENST00000513341 PPP1R13LQ8WUF5 828 aa5.48□□□□□ -1.53
PDLIM5-218ENST00000513341 MTFR1LQ9H019 292 aa5.48□□□□□ -1.53
PDLIM5-218ENST00000513341 PRDM11Q9NQV5 511 aa5.48□□□□□ -1.53
PDLIM5-218ENST00000513341 GPR160Q9UJ42 338 aa5.48□□□□□ -1.53
PDLIM5-218ENST00000513341 ABCA3Q99758 1704 aa5.48□□□□□ -1.53
PDLIM5-218ENST00000513341 RGPD3A6NKT7 1758 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 RGPD8O14715 1765 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 RGPD4Q7Z3J3 1758 aa5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 GPRASP1Q5JY77 1395 aa5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 GIPC1O14908 333 aa5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 GRK4P32298 578 aa5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 EVA1CP58658 441 aa5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 YBX1P67809 324 aaKnown RBP5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 SRSF3P84103 164 aaKnown RBP5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 WIPI1Q5MNZ9 446 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 NLRX1Q86UT6 975 aa5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 LINC01356Q8N9X3 169 aa5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 DTWD2Q8NBA8 298 aa5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 CRTAC1Q9NQ79 661 aa5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 STK26Q9P289 416 aa5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 KCNH3Q9ULD8 1083 aa5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 CEP131Q9UPN4 1083 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms