RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ERVK-24P63145 666 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 CCT2P78371 535 aaKnown RBP8.8□□□□□ -1
HMGXB3-204ENST00000513318 STK3Q13188 491 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 ME3Q16798 604 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 CPLX2Q6PUV4 134 aaKnown RBP8.8□□□□□ -1
HMGXB3-204ENST00000513318 ADGRF4Q8IZF3 695 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 ANKRD13CQ8N6S4 541 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 REPS2Q8NFH8 660 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 GTF3C6Q969F1 213 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 PAGR1Q9BTK6 254 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 UBA5Q9GZZ9 404 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 RANBP17Q9H2T7 1088 aaKnown RBP8.8□□□□□ -1
HMGXB3-204ENST00000513318 CPVLQ9H3G5 476 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 RIOX1Q9H6W3 641 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 SLC38A10Q9HBR0 1119 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 WBP1LQ9NX94 342 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 RBM27Q9P2N5 1060 aaKnown RBP8.8□□□□□ -1
HMGXB3-204ENST00000513318 MORF4L1Q9UBU8 362 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 PNMA2Q9UL42 364 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 RABGAP1Q9Y3P9 1069 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 CTDP1Q9Y5B0 961 aaPredicted RBP8.8□□□□□ -1
HMGXB3-204ENST00000513318 ATP2A1O14983 1001 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 CYTH3O43739 400 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 CDKL5O76039 1030 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 CD2BP2O95400 341 aaKnown RBP8.79□□□□□ -1
HMGXB3-204ENST00000513318 LARGE1O95461 756 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 IFNAR1P17181 557 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 COPB2P35606 906 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 ADD1P35611 737 aaKnown RBP8.79□□□□□ -1
HMGXB3-204ENST00000513318 CCNA1P78396 465 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 SCRN1Q12765 414 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 CDC37Q16543 378 aaPredicted RBP8.79□□□□□ -1
HMGXB3-204ENST00000513318 NOM1Q5C9Z4 860 aaKnown RBP8.79□□□□□ -1
HMGXB3-204ENST00000513318 C17orf99Q6UX52 265 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 NBPF11Q86T75 865 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 SRBD1Q8N5C6 995 aaKnown RBP8.79□□□□□ -1
HMGXB3-204ENST00000513318 MTMR8Q96EF0 704 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 TEX13BQ9BXU2 312 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 RNF26Q9BY78 433 aaPredicted RBP8.79□□□□□ -1
HMGXB3-204ENST00000513318 NCOA5Q9HCD5 579 aaKnown RBP8.79□□□□□ -1
HMGXB3-204ENST00000513318 FAM217BQ9NTX9 383 aaPredicted RBP8.79□□□□□ -1
HMGXB3-204ENST00000513318 RBPJLQ9UBG7 517 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 SEC63Q9UGP8 760 aaKnown RBP8.79□□□□□ -1
HMGXB3-204ENST00000513318 CPA4Q9UI42 421 aa8.79□□□□□ -1
HMGXB3-204ENST00000513318 ZNF214Q9UL59 606 aaPredicted RBP8.79□□□□□ -1
HMGXB3-204ENST00000513318 WDR81Q562E7 1941 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 FRMPD3Q5JV73 1810 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 ZBTB5O15062 677 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 CNMDO75829 334 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 TBC1D8O95759 1140 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 ICAM1P05362 532 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 FUT2Q10981 343 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 TRAF1Q13077 416 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 PLS1Q14651 629 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 TMEM132BQ14DG7 1078 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 NTRK3Q16288 839 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 SLC35G1Q2M3R5 365 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 QRICH1Q2TAL8 776 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 POTEEQ6S8J3 1075 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 HOMER1Q86YM7 354 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 RIOX2Q8IUF8 465 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 TRIM22Q8IYM9 498 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 CPXCR1Q8N123 301 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 CMTR1Q8N1G2 835 aaKnown RBP8.78□□□□□ -1
HMGXB3-204ENST00000513318 GPRC5AQ8NFJ5 357 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 SNX21Q969T3 373 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 RRP36Q96EU6 259 aaKnown RBP8.78□□□□□ -1
HMGXB3-204ENST00000513318 SPATC1LQ9H0A9 340 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 JMJD4Q9H9V9 463 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 TXNRD2Q9NNW7 524 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 BTBD7Q9P203 1132 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 ZNF536O15090 1300 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 STK36Q9NRP7 1315 aa8.78□□□□□ -1
HMGXB3-204ENST00000513318 PNMA6FA0A0J9YX94 578 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 hCG_1984214I3L0E3 225 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 K7ELQ4 463 aaPredicted RBP8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 GPR25O00155 361 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 SLC25A27O95847 323 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 HSPA1AP0DMV8 641 aaKnown RBP8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 HSPA1BP0DMV9 641 aaKnown RBP8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 STAT3P40763 770 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 AKAP17AQ02040 695 aaKnown RBP8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 SP3Q02447 781 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 TKFCQ3LXA3 575 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 SNRNP48Q6IEG0 339 aaKnown RBP8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 CCDC174Q6PII3 467 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 FBXO11Q86XK2 927 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 HSCBQ8IWL3 235 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 CCDC82Q8N4S0 544 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 ZNF713Q8N859 430 aaPredicted RBP8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 SHCBP1Q8NEM2 672 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 TMX3Q96JJ7 454 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 PIGSQ96S52 555 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 LLPHQ9BRT6 129 aaKnown RBP8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 AMNQ9BXJ7 453 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 MOV10L1Q9BXT6 1211 aaKnown RBP8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 R3HDMLQ9H3Y0 253 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 RAVER2Q9HCJ3 691 aaKnown RBP8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 VAT1LQ9HCJ6 419 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 CCPG1Q9ULG6 757 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms