RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 ARID4AP29374 1257 aaPredicted RBP11.7□□□□□ -0.54
PTPN20-228ENST00000513266 KCNJ6P48051 423 aa11.7□□□□□ -0.54
PTPN20-228ENST00000513266 DEFB103AP81534 67 aa11.7□□□□□ -0.54
PTPN20-228ENST00000513266 ZXDAP98168 799 aa11.7□□□□□ -0.54
PTPN20-228ENST00000513266 TCEAL5Q5H9L2 206 aa11.7□□□□□ -0.54
PTPN20-228ENST00000513266 C17orf80Q9BSJ5 609 aa11.7□□□□□ -0.54
PTPN20-228ENST00000513266 ZBED2Q9BTP6 218 aa11.7□□□□□ -0.54
PTPN20-228ENST00000513266 GNEQ9Y223 722 aaKnown RBP11.7□□□□□ -0.54
PTPN20-228ENST00000513266 MBTPS2O43462 519 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 COPB2P35606 906 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 TIGD5Q53EQ6 642 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 ARMCX2Q7L311 632 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 TLK2Q86UE8 772 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 CLEC10AQ8IUN9 316 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 SIAH1Q8IUQ4 282 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 MAGEB6Q8N7X4 407 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 BANK1Q8NDB2 785 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 FBXO22Q8NEZ5 403 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 RMDN1Q96DB5 314 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 CLDND1Q9NY35 253 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 RALGAPA2Q2PPJ7 1873 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 USP24Q9UPU5 2620 aa11.69□□□□□ -0.54
PTPN20-228ENST00000513266 WDR46O15213 610 aaKnown RBP11.68□□□□□ -0.54
PTPN20-228ENST00000513266 GJB5O95377 273 aa11.68□□□□□ -0.54
PTPN20-228ENST00000513266 SUPT20HL2P0C7V6 817 aa11.68□□□□□ -0.54
PTPN20-228ENST00000513266 PLCD1P51178 756 aa11.68□□□□□ -0.54
PTPN20-228ENST00000513266 TNFAIP2Q03169 654 aa11.68□□□□□ -0.54
PTPN20-228ENST00000513266 DLX2Q07687 328 aaPredicted RBP11.68□□□□□ -0.54
PTPN20-228ENST00000513266 CLUL1Q15846 466 aa11.68□□□□□ -0.54
PTPN20-228ENST00000513266 NOL8Q76FK4 1167 aaKnown RBP11.68□□□□□ -0.54
PTPN20-228ENST00000513266 ADSSL1Q8N142 457 aa11.68□□□□□ -0.54
PTPN20-228ENST00000513266 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTPN20-228ENST00000513266 ASIC4Q96FT7 647 aa11.68□□□□□ -0.54
PTPN20-228ENST00000513266 RAD9AQ99638 391 aa11.68□□□□□ -0.54
PTPN20-228ENST00000513266 COPRSQ9NQ92 184 aa11.68□□□□□ -0.54
PTPN20-228ENST00000513266 RIPK3Q9Y572 518 aa11.68□□□□□ -0.54
PTPN20-228ENST00000513266 LCTP09848 1927 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 RBAK-RBAKDNI3L0D1 243 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 STXBP3O00186 592 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 PITPNM1O00562 1244 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 MPHOSPH10O00566 681 aaKnown RBP11.67□□□□□ -0.54
PTPN20-228ENST00000513266 EVX2Q03828 476 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 GABPAQ06546 454 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 TFCP2Q12800 502 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 GPNMBQ14956 572 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 DGLUCYQ7Z3D6 616 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 TTC6Q86TZ1 520 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 RPAINQ86UA6 219 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 CCDC144CPQ8IYA2 1237 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 NEUROD6Q96NK8 337 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 CTNNA3Q9UI47 895 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 PPP1R9AQ9ULJ8 1098 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 TMX2Q9Y320 296 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 MYO10Q9HD67 2058 aa11.67□□□□□ -0.54
PTPN20-228ENST00000513266 DYNC1LI2O43237 492 aaPredicted RBP11.66□□□□□ -0.54
PTPN20-228ENST00000513266 GALR2O43603 387 aaPredicted RBP11.66□□□□□ -0.54
PTPN20-228ENST00000513266 KDM4AO75164 1064 aa11.66□□□□□ -0.54
PTPN20-228ENST00000513266 SMPD1P17405 629 aa11.66□□□□□ -0.54
PTPN20-228ENST00000513266 SIGLEC14Q08ET2 396 aa11.66□□□□□ -0.54
PTPN20-228ENST00000513266 PTPROQ16827 1216 aa11.66□□□□□ -0.54
PTPN20-228ENST00000513266 TCTN1Q2MV58 587 aa11.66□□□□□ -0.54
PTPN20-228ENST00000513266 CTC1Q2NKJ3 1217 aa11.66□□□□□ -0.54
PTPN20-228ENST00000513266 TMEM63BQ5T3F8 832 aa11.66□□□□□ -0.54
PTPN20-228ENST00000513266 SNRKQ9NRH2 765 aa11.66□□□□□ -0.54
PTPN20-228ENST00000513266 AKAP2Q9Y2D5 859 aa11.66□□□□□ -0.54
PTPN20-228ENST00000513266 ZEB2O60315 1214 aa11.65□□□□□ -0.54
PTPN20-228ENST00000513266 USP5P45974 858 aa11.65□□□□□ -0.54
PTPN20-228ENST00000513266 CACNB1Q02641 598 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-228ENST00000513266 SMAD4Q13485 552 aaKnown RBP11.65□□□□□ -0.54
PTPN20-228ENST00000513266 SNRNP48Q6IEG0 339 aaKnown RBP11.65□□□□□ -0.54
PTPN20-228ENST00000513266 FRMD5Q7Z6J6 570 aa11.65□□□□□ -0.54
PTPN20-228ENST00000513266 RETREG2Q8NC44 543 aa11.65□□□□□ -0.54
PTPN20-228ENST00000513266 NKD2Q969F2 451 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-228ENST00000513266 TEX13BQ9BXU2 312 aa11.65□□□□□ -0.54
PTPN20-228ENST00000513266 AP5M1Q9H0R1 490 aa11.65□□□□□ -0.54
PTPN20-228ENST00000513266 NSUN3Q9H649 340 aaKnown RBP11.65□□□□□ -0.54
PTPN20-228ENST00000513266 FASNP49327 2511 aaKnown RBP11.64□□□□□ -0.55
PTPN20-228ENST00000513266 BAZ2AQ9UIF9 1905 aaKnown RBP11.64□□□□□ -0.55
PTPN20-228ENST00000513266 PDGFBP01127 241 aaPredicted RBP11.64□□□□□ -0.55
PTPN20-228ENST00000513266 NUBP1P53384 320 aa11.64□□□□□ -0.55
PTPN20-228ENST00000513266 EPC2Q52LR7 807 aa11.64□□□□□ -0.55
PTPN20-228ENST00000513266 GORABQ5T7V8 394 aa11.64□□□□□ -0.55
PTPN20-228ENST00000513266 FAM117BQ6P1L5 589 aa11.64□□□□□ -0.55
PTPN20-228ENST00000513266 TMEM179Q6ZVK1 233 aa11.64□□□□□ -0.55
PTPN20-228ENST00000513266 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTPN20-228ENST00000513266 MIGA1Q8NAN2 632 aa11.64□□□□□ -0.55
PTPN20-228ENST00000513266 PPP1R13LQ8WUF5 828 aa11.64□□□□□ -0.55
PTPN20-228ENST00000513266 FAM208BQ5VWN6 2430 aa11.64□□□□□ -0.55
PTPN20-228ENST00000513266 LOC730098B7Z3J9 87 aa11.63□□□□□ -0.55
PTPN20-228ENST00000513266 H3BNC9 293 aa11.63□□□□□ -0.55
PTPN20-228ENST00000513266 TBX10O75333 385 aa11.63□□□□□ -0.55
PTPN20-228ENST00000513266 CYP2E1P05181 493 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-228ENST00000513266 COL9A2Q14055 689 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-228ENST00000513266 CRBNQ96SW2 442 aa11.63□□□□□ -0.55
PTPN20-228ENST00000513266 ARHGEF10LQ9HCE6 1279 aa11.63□□□□□ -0.55
PTPN20-228ENST00000513266 PDGFCQ9NRA1 345 aa11.63□□□□□ -0.55
PTPN20-228ENST00000513266 DDX49Q9Y6V7 483 aaKnown RBP11.63□□□□□ -0.55
PTPN20-228ENST00000513266 FRYLO94915 3013 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms