RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 FAM84BQ96KN1 310 aaPredicted RBP12.93□□□□□ -0.34
SNX25-205ENST00000512853 CNOT6LQ96LI5 555 aaKnown RBP12.93□□□□□ -0.34
SNX25-205ENST00000512853 NHEJ1Q9H9Q4 299 aaPredicted RBP12.93□□□□□ -0.34
SNX25-205ENST00000512853 AGPAT5Q9NUQ2 364 aa12.93□□□□□ -0.34
SNX25-205ENST00000512853 RNF216Q9NWF9 866 aaPredicted RBP12.93□□□□□ -0.34
SNX25-205ENST00000512853 NIP7Q9Y221 180 aaKnown RBP eCLIP12.93□□□□□ -0.34
SNX25-205ENST00000512853 CCDC194A0A1B0GVG4 234 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 CYP2D6P10635 497 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 HNRNPH3P31942 346 aaKnown RBP12.92□□□□□ -0.34
SNX25-205ENST00000512853 MAGEA9P43362 315 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 SF3B3Q15393 1217 aaKnown RBP12.92□□□□□ -0.34
SNX25-205ENST00000512853 MIIPQ5JXC2 388 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 TYW1BQ6NUM6 668 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 CSGALNACT2Q8N6G5 542 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 CAGE1Q8TC20 777 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 AENQ8WTP8 325 aaKnown RBP12.92□□□□□ -0.34
SNX25-205ENST00000512853 GPKOWQ92917 476 aaPredicted RBP eCLIP12.92□□□□□ -0.34
SNX25-205ENST00000512853 CAPZA3Q96KX2 299 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 SELENOOQ9BVL4 669 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 BSDC1Q9NW68 430 aaPredicted RBP12.92□□□□□ -0.34
SNX25-205ENST00000512853 BTG4Q9NY30 223 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 PCDHA6Q9UN73 950 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 PCDHA8Q9Y5H6 950 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 ROBO3Q96MS0 1386 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 PES1O00541 588 aaKnown RBP12.92□□□□□ -0.34
SNX25-205ENST00000512853 TRIM21P19474 475 aaKnown RBP12.92□□□□□ -0.34
SNX25-205ENST00000512853 UBA7P41226 1012 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 GNAQP50148 359 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 CORO7P57737 925 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 MECOMQ03112 1051 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 TBC1D8BQ0IIM8 1120 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 DGKHQ86XP1 1220 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 RASGRP4Q8TDF6 673 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 SECISBP2LQ93073 1101 aaKnown RBP12.92□□□□□ -0.34
SNX25-205ENST00000512853 CCDC47Q96A33 483 aaKnown RBP12.92□□□□□ -0.34
SNX25-205ENST00000512853 AK8Q96MA6 479 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 C7orf25Q9BPX7 421 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 KAT14Q9H8E8 782 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 EFCC1Q9HA90 598 aa12.92□□□□□ -0.34
SNX25-205ENST00000512853 COL16A1Q07092 1604 aaPredicted RBP12.91□□□□□ -0.34
SNX25-205ENST00000512853 NAV1Q8NEY1 1877 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 NUTM2BA6NNL0 878 aaPredicted RBP12.91□□□□□ -0.34
SNX25-205ENST00000512853 NUTM2EB1AL46 878 aaPredicted RBP12.91□□□□□ -0.34
SNX25-205ENST00000512853 AGPSO00116 658 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 MYBL2P10244 700 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 IDEP14735 1019 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 PRLRP16471 622 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 KLK7P49862 253 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 AMOTL1Q8IY63 956 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 RASSF8Q8NHQ8 419 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 CRACR2AQ9BSW2 395 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 TRIM9Q9C026 710 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 RSPH14Q9UHP6 348 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 FAM184BQ9ULE4 1060 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 SNX12Q9UMY4 172 aa12.91□□□□□ -0.34
SNX25-205ENST00000512853 STXBP3O00186 592 aa12.9□□□□□ -0.34
SNX25-205ENST00000512853 EXOC5O00471 708 aa12.9□□□□□ -0.34
SNX25-205ENST00000512853 ZNF263O14978 683 aa12.9□□□□□ -0.34
SNX25-205ENST00000512853 PLCG1P19174 1290 aa12.9□□□□□ -0.34
SNX25-205ENST00000512853 C2orf54Q08AI8 447 aa12.9□□□□□ -0.34
SNX25-205ENST00000512853 KIF5AQ12840 1032 aa12.9□□□□□ -0.34
SNX25-205ENST00000512853 SLC35G1Q2M3R5 365 aa12.9□□□□□ -0.34
SNX25-205ENST00000512853 TRIM58Q8NG06 486 aa12.9□□□□□ -0.34
SNX25-205ENST00000512853 SMARCC1Q92922 1105 aaPredicted RBP12.9□□□□□ -0.34
SNX25-205ENST00000512853 SH2D4AQ9H788 454 aa12.9□□□□□ -0.34
SNX25-205ENST00000512853 MINPP1Q9UNW1 487 aa12.9□□□□□ -0.34
SNX25-205ENST00000512853 JRKLQ9Y4A0 524 aa12.9□□□□□ -0.34
SNX25-205ENST00000512853 ZNF831Q5JPB2 1677 aa12.9□□□□□ -0.34
SNX25-205ENST00000512853 WTIPA6NIX2 430 aaPredicted RBP12.9□□□□□ -0.35
SNX25-205ENST00000512853 ZNF185O15231 689 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 LCA5LO95447 670 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 GGCXP38435 758 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 MTIF2P46199 727 aaKnown RBP12.9□□□□□ -0.35
SNX25-205ENST00000512853 INF2Q27J81 1249 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 CCDC178Q5BJE1 867 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 ANKRD40Q6AI12 368 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 CCDC70Q6NSX1 233 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 C3orf67Q6ZVT6 689 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 CABP7Q86V35 215 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 CREG2Q8IUH2 290 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 GSPT2Q8IYD1 628 aaKnown RBP12.9□□□□□ -0.35
SNX25-205ENST00000512853 PNMA1Q8ND90 353 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 ZBTB9Q96C00 473 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 BARHL2Q9NY43 387 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 MAD2L2Q9UI95 211 aa12.9□□□□□ -0.35
SNX25-205ENST00000512853 ABCB11O95342 1321 aa12.89□□□□□ -0.35
SNX25-205ENST00000512853 VGLL3A8MV65 326 aa12.89□□□□□ -0.35
SNX25-205ENST00000512853 TACC1O75410 805 aa12.89□□□□□ -0.35
SNX25-205ENST00000512853 CPP00450 1065 aa12.89□□□□□ -0.35
SNX25-205ENST00000512853 OR52Z1P0C646 297 aa12.89□□□□□ -0.35
SNX25-205ENST00000512853 TNFRSF8P28908 595 aa12.89□□□□□ -0.35
SNX25-205ENST00000512853 NOP2P46087 812 aaKnown RBP12.89□□□□□ -0.35
SNX25-205ENST00000512853 PDE4DQ08499 809 aa12.89□□□□□ -0.35
SNX25-205ENST00000512853 SF3B2Q13435 895 aaKnown RBP12.89□□□□□ -0.35
SNX25-205ENST00000512853 FKBP15Q5T1M5 1219 aa12.89□□□□□ -0.35
SNX25-205ENST00000512853 STAG2Q8N3U4 1231 aa12.89□□□□□ -0.35
SNX25-205ENST00000512853 FAM76AQ8TAV0 307 aa12.89□□□□□ -0.35
SNX25-205ENST00000512853 NOC4LQ9BVI4 516 aaKnown RBP12.89□□□□□ -0.35
SNX25-205ENST00000512853 LRWD1Q9UFC0 647 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms