RNA–Protein interactions for RNA: ENST00000512805.5

RACK1-227, Transcript of receptor for activated C kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACK1, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-227ENST00000512805 ERCC3P19447 782 aa12.6□□□□□ -0.39
RACK1-227ENST00000512805 NMIQ13287 307 aaPredicted RBP12.6□□□□□ -0.39
RACK1-227ENST00000512805 NKD2Q969F2 451 aaPredicted RBP12.6□□□□□ -0.39
RACK1-227ENST00000512805 AGBL1Q96MI9 1066 aa12.6□□□□□ -0.39
RACK1-227ENST00000512805 TINF2Q9BSI4 451 aa12.6□□□□□ -0.39
RACK1-227ENST00000512805 BACH2Q9BYV9 841 aa12.6□□□□□ -0.39
RACK1-227ENST00000512805 GNL3LQ9NVN8 582 aaKnown RBP12.6□□□□□ -0.39
RACK1-227ENST00000512805 GPR179Q6PRD1 2367 aa12.59□□□□□ -0.39
RACK1-227ENST00000512805 FOXP2O15409 715 aa12.59□□□□□ -0.39
RACK1-227ENST00000512805 CDC45O75419 566 aa12.59□□□□□ -0.39
RACK1-227ENST00000512805 BTDP43251 543 aa12.59□□□□□ -0.39
RACK1-227ENST00000512805 ZXDAP98168 799 aa12.59□□□□□ -0.39
RACK1-227ENST00000512805 PUM1Q14671 1186 aaKnown RBP eCLIP12.59□□□□□ -0.391e-13■□□□□ 8.5
RACK1-227ENST00000512805 SHROOM1Q2M3G4 852 aaPredicted RBP12.59□□□□□ -0.39
RACK1-227ENST00000512805 OSBP2Q969R2 916 aa12.59□□□□□ -0.39
RACK1-227ENST00000512805 VTI1AQ96AJ9 217 aa12.59□□□□□ -0.39
RACK1-227ENST00000512805 PABPC5Q96DU9 382 aaKnown RBP12.59□□□□□ -0.39
RACK1-227ENST00000512805 MROH8Q9H579 483 aa12.59□□□□□ -0.39
RACK1-227ENST00000512805 GPR75-ASB3A0A0A6YYF3 556 aa12.58□□□□□ -0.4
RACK1-227ENST00000512805 GALR2O43603 387 aaPredicted RBP12.58□□□□□ -0.4
RACK1-227ENST00000512805 DUSP11O75319 330 aaKnown RBP12.58□□□□□ -0.4
RACK1-227ENST00000512805 PDE6AP16499 860 aa12.58□□□□□ -0.4
RACK1-227ENST00000512805 ADD2P35612 726 aa12.58□□□□□ -0.4
RACK1-227ENST00000512805 SMAD2Q15796 467 aaKnown RBP12.58□□□□□ -0.4
RACK1-227ENST00000512805 ZMYM1Q5SVZ6 1142 aa12.58□□□□□ -0.4
RACK1-227ENST00000512805 ZNF589Q86UQ0 364 aaPredicted RBP12.58□□□□□ -0.4
RACK1-227ENST00000512805 METTL16Q86W50 562 aaKnown RBP12.58□□□□□ -0.4
RACK1-227ENST00000512805 SLF2Q8IX21 1173 aa12.58□□□□□ -0.4
RACK1-227ENST00000512805 SPATC1LQ9H0A9 340 aa12.58□□□□□ -0.4
RACK1-227ENST00000512805 PI4KBQ9UBF8 816 aa12.58□□□□□ -0.4
RACK1-227ENST00000512805 ZBTB21Q9ULJ3 1066 aa12.58□□□□□ -0.4
RACK1-227ENST00000512805 DIS3Q9Y2L1 958 aaKnown RBP12.58□□□□□ -0.4
RACK1-227ENST00000512805 CEP250Q9BV73 2442 aa12.58□□□□□ -0.4
RACK1-227ENST00000512805 SETXQ7Z333 2677 aaKnown RBP12.57□□□□□ -0.4
RACK1-227ENST00000512805 M0R2C6 588 aa12.57□□□□□ -0.4
RACK1-227ENST00000512805 RNF113AO15541 343 aaKnown RBP12.57□□□□□ -0.4
RACK1-227ENST00000512805 IDH1O75874 414 aaKnown RBP12.57□□□□□ -0.4
RACK1-227ENST00000512805 VCAM1P19320 739 aa12.57□□□□□ -0.4
RACK1-227ENST00000512805 ERVK-21P61565 698 aa12.57□□□□□ -0.4
RACK1-227ENST00000512805 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
RACK1-227ENST00000512805 MECOMQ03112 1051 aa12.57□□□□□ -0.4
RACK1-227ENST00000512805 NBPF20Q3BBV1 942 aa12.57□□□□□ -0.4
RACK1-227ENST00000512805 NSUN4Q96CB9 384 aaKnown RBP12.57□□□□□ -0.4
RACK1-227ENST00000512805 SCLYQ96I15 445 aa12.57□□□□□ -0.4
RACK1-227ENST00000512805 PUS7LQ9H0K6 701 aaKnown RBP12.57□□□□□ -0.4
RACK1-227ENST00000512805 ABCF2Q9UG63 623 aa12.57□□□□□ -0.4
RACK1-227ENST00000512805 SIPA1L1O43166 1804 aa12.57□□□□□ -0.4
RACK1-227ENST00000512805 ZNF532Q9HCE3 1301 aa12.57□□□□□ -0.4
RACK1-227ENST00000512805 LCHNA4D1U4 455 aa12.56□□□□□ -0.4
RACK1-227ENST00000512805 SGSM2O43147 1006 aa12.56□□□□□ -0.4
RACK1-227ENST00000512805 ACTN1P12814 892 aa12.56□□□□□ -0.4
RACK1-227ENST00000512805 NKX3-2P78367 333 aa12.56□□□□□ -0.4
RACK1-227ENST00000512805 SLC9C2Q5TAH2 1124 aa12.56□□□□□ -0.4
RACK1-227ENST00000512805 CWC27Q6UX04 472 aaKnown RBP12.56□□□□□ -0.4
RACK1-227ENST00000512805 MAGEB6Q8N7X4 407 aa12.56□□□□□ -0.4
RACK1-227ENST00000512805 ASIC4Q96FT7 647 aa12.56□□□□□ -0.4
RACK1-227ENST00000512805 ESYT1Q9BSJ8 1104 aa12.56□□□□□ -0.4
RACK1-227ENST00000512805 UPF3AQ9H1J1 476 aaKnown RBP12.56□□□□□ -0.4
RACK1-227ENST00000512805 DNAJC18Q9H819 358 aa12.56□□□□□ -0.4
RACK1-227ENST00000512805 FAM184BQ9ULE4 1060 aa12.56□□□□□ -0.4
RACK1-227ENST00000512805 C6orf222P0C671 652 aaPredicted RBP12.55□□□□□ -0.4
RACK1-227ENST00000512805 FCER1AP12319 257 aa12.55□□□□□ -0.4
RACK1-227ENST00000512805 GJA9P57773 515 aa12.55□□□□□ -0.4
RACK1-227ENST00000512805 SIGLEC14Q08ET2 396 aa12.55□□□□□ -0.4
RACK1-227ENST00000512805 TTF1Q15361 905 aaPredicted RBP12.55□□□□□ -0.4
RACK1-227ENST00000512805 ZNF792Q3KQV3 632 aa12.55□□□□□ -0.4
RACK1-227ENST00000512805 MCTP2Q6DN12 878 aa12.55□□□□□ -0.4
RACK1-227ENST00000512805 SEZ6LQ9BYH1 1024 aa12.55□□□□□ -0.4
RACK1-227ENST00000512805 KIAA1683Q9H0B3 1180 aa12.55□□□□□ -0.4
RACK1-227ENST00000512805 DLL3Q9NYJ7 618 aa12.55□□□□□ -0.4
RACK1-227ENST00000512805 MROH7-TTC4A0A0A0MT08 1334 aa12.55□□□□□ -0.4
RACK1-227ENST00000512805 SPTBN2O15020 2390 aa12.55□□□□□ -0.4
RACK1-227ENST00000512805 SIP14410 1827 aa12.55□□□□□ -0.4
RACK1-227ENST00000512805 USP14P54578 494 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 PTH1RQ03431 593 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 UBE3CQ15386 1083 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 VPS53Q5VIR6 699 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 DZIP1Q86YF9 867 aaKnown RBP12.54□□□□□ -0.4
RACK1-227ENST00000512805 FOXP4Q8IVH2 680 aaPredicted RBP12.54□□□□□ -0.4
RACK1-227ENST00000512805 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
RACK1-227ENST00000512805 TGS1Q96RS0 853 aaKnown RBP12.54□□□□□ -0.4
RACK1-227ENST00000512805 RIOK1Q9BRS2 568 aaKnown RBP12.54□□□□□ -0.4
RACK1-227ENST00000512805 HOXC10Q9NYD6 342 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 RAI14Q9P0K7 980 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 LRP2BPQ9P2M1 347 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 CNPY2Q9Y2B0 182 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 SCN5AQ14524 2016 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 PTPRSQ13332 1948 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 GRIN2DO15399 1336 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 CTAGE5O15320 804 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 B4GALT4O60513 344 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 GDF11O95390 407 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 LTBRP36941 435 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 DYNLL1P63167 89 aaKnown RBP12.54□□□□□ -0.4
RACK1-227ENST00000512805 COG2Q14746 738 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 GNASQ5JWF2 1037 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 ERICH6Q7L0X2 663 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 FRMD5Q7Z6J6 570 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 MIGA1Q8NAN2 632 aa12.54□□□□□ -0.4
RACK1-227ENST00000512805 APPBP2Q92624 585 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms