RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PFDN4Q9NQP4 134 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 CPSF2Q9P2I0 782 aaKnown RBP13.67□□□□□ -0.22
COL11A1-210ENST00000512756 NOD1Q9Y239 953 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 GINS2Q9Y248 185 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 IFNB1P01574 187 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 SLFN14P0C7P3 912 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 LIG4P49917 911 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 PCDHA4Q9UN74 947 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 FRMPD2Q68DX3 1309 aaPredicted RBP13.67□□□□□ -0.22
COL11A1-210ENST00000512756 SH3BP5O60239 455 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 BTDP43251 543 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 IRX4P78413 519 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 DPCR1Q3MIW9 517 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 CERKLQ49MI3 558 aaPredicted RBP13.67□□□□□ -0.22
COL11A1-210ENST00000512756 GPATCH4Q5T3I0 446 aaKnown RBP13.67□□□□□ -0.22
COL11A1-210ENST00000512756 ZBTB8OSQ8IWT0 167 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 CTAGE3PQ8IX95 158 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 CCDC17Q96LX7 622 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 AS3MTQ9HBK9 375 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 USH1CQ9Y6N9 552 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 ABCC12Q96J65 1359 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 TTC37Q6PGP7 1564 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 LMNB1P20700 586 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 MGARPQ8TDB4 240 aa13.67□□□□□ -0.22
COL11A1-210ENST00000512756 hCG_1984214I3L0E3 225 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 POLR2BP30876 1174 aaKnown RBP13.66□□□□□ -0.22
COL11A1-210ENST00000512756 SLC12A2P55011 1212 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
COL11A1-210ENST00000512756 NIM1KQ8IY84 436 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 CCDC13Q8IYE1 715 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 ZNF713Q8N859 430 aaPredicted RBP13.66□□□□□ -0.22
COL11A1-210ENST00000512756 SLC17A8Q8NDX2 589 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 ENOX1Q8TC92 643 aaKnown RBP13.66□□□□□ -0.22
COL11A1-210ENST00000512756 MIPOL1Q8TD10 442 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 RILPQ96NA2 401 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 PASKQ96RG2 1323 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 CAPN7Q9Y6W3 813 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 ZWINTO95229 277 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 MAN1A1P33908 653 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 BPIFB4P59827 614 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 ASPRV1Q53RT3 343 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 SLC35F6Q8N357 371 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 LARP4BQ92615 738 aaKnown RBP13.66□□□□□ -0.22
COL11A1-210ENST00000512756 TLR7Q9NYK1 1049 aaKnown RBP13.66□□□□□ -0.22
COL11A1-210ENST00000512756 RNF14Q9UBS8 474 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 NRBP1Q9UHY1 535 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
COL11A1-210ENST00000512756 GOLGA8HP0CJ92 632 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 XKR9Q5GH70 373 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 PHLDB3Q6NSJ2 640 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 PLA2G4DQ86XP0 818 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 HACE1Q8IYU2 909 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 P2RX5Q93086 422 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 DPH5Q9H2P9 285 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 ADORA1P30542 326 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 ARMCX5Q6P1M9 558 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 ZNF589Q86UQ0 364 aaPredicted RBP13.66□□□□□ -0.22
COL11A1-210ENST00000512756 LRRC47Q8N1G4 583 aaKnown RBP13.66□□□□□ -0.22
COL11A1-210ENST00000512756 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.66□□□□□ -0.22
COL11A1-210ENST00000512756 GLG1Q92896 1179 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 PLEKHA4Q9H4M7 779 aa13.66□□□□□ -0.22
COL11A1-210ENST00000512756 GCFC2P16383 781 aaKnown RBP13.65□□□□□ -0.22
COL11A1-210ENST00000512756 IFNAR1P17181 557 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 ADD2P35612 726 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 ICA1Q05084 483 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 ZNF658Q5TYW1 1059 aaPredicted RBP13.65□□□□□ -0.22
COL11A1-210ENST00000512756 SLFN13Q68D06 897 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 CACTINQ8WUQ7 758 aaKnown RBP13.65□□□□□ -0.22
COL11A1-210ENST00000512756 THAP12O43422 761 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 ARHGEF16Q5VV41 709 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 C11orf57Q6ZUT1 292 aaPredicted RBP13.65□□□□□ -0.22
COL11A1-210ENST00000512756 PPP4R1Q8TF05 950 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 CHAMP1Q96JM3 812 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 PUS3Q9BZE2 481 aaKnown RBP13.65□□□□□ -0.22
COL11A1-210ENST00000512756 PDE11AQ9HCR9 933 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 FAM114A2Q9NRY5 505 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 KIF3CO14782 793 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 TNNC2P02585 160 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 IL6STP40189 918 aaPredicted RBP13.65□□□□□ -0.22
COL11A1-210ENST00000512756 GUCY2DQ02846 1103 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 PROSER3Q2NL68 480 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 RABGAP1Q9Y3P9 1069 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 PCDHA1Q9Y5I3 950 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 ZNF804BA4D1E1 1349 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 TESPA1A2RU30 521 aaPredicted RBP13.65□□□□□ -0.22
COL11A1-210ENST00000512756 HIP1RO75146 1068 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 STAM2O75886 525 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 MMP1P03956 469 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 NT5C2P49902 561 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 ATP1A2P50993 1020 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 LMNB2Q03252 620 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 EHHADHQ08426 723 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 PPP2R5DQ14738 602 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 MAN2A1Q16706 1144 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 STK17AQ9UEE5 414 aa13.65□□□□□ -0.22
COL11A1-210ENST00000512756 PPIP5K2O43314 1243 aa13.65□□□□□ -0.23
COL11A1-210ENST00000512756 ATF2P15336 505 aa13.65□□□□□ -0.23
COL11A1-210ENST00000512756 GAP43P17677 238 aa13.65□□□□□ -0.23
COL11A1-210ENST00000512756 EPHB4P54760 987 aa13.65□□□□□ -0.23
COL11A1-210ENST00000512756 PPM1KQ8N3J5 372 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms