RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 CAP2P40123 477 aa7.86□□□□□ -1.15
CLDND1-225ENST00000512147 RGS3P49796 1198 aa7.86□□□□□ -1.15
CLDND1-225ENST00000512147 RARSP54136 660 aaKnown RBP7.86□□□□□ -1.15
CLDND1-225ENST00000512147 IRX5P78411 483 aaPredicted RBP7.86□□□□□ -1.15
CLDND1-225ENST00000512147 VPS37DQ86XT2 251 aa7.86□□□□□ -1.15
CLDND1-225ENST00000512147 ABRAQ8N0Z2 381 aa7.86□□□□□ -1.15
CLDND1-225ENST00000512147 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.86□□□□□ -1.15
CLDND1-225ENST00000512147 ATRIPQ8WXE1 791 aa7.86□□□□□ -1.15
CLDND1-225ENST00000512147 SSH1Q8WYL5 1049 aa7.86□□□□□ -1.15
CLDND1-225ENST00000512147 FAM84BQ96KN1 310 aaPredicted RBP7.86□□□□□ -1.15
CLDND1-225ENST00000512147 MYD88Q99836 296 aa7.86□□□□□ -1.15
CLDND1-225ENST00000512147 SLC4A5Q9BY07 1137 aa7.86□□□□□ -1.15
CLDND1-225ENST00000512147 CHMP4AQ9BY43 222 aa7.86□□□□□ -1.15
CLDND1-225ENST00000512147 GPSM3Q9Y4H4 160 aa7.86□□□□□ -1.15
CLDND1-225ENST00000512147 FANCMQ8IYD8 2048 aa7.86□□□□□ -1.15
CLDND1-225ENST00000512147 MYO10Q9HD67 2058 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 SMG1Q96Q15 3661 aaKnown RBP7.85□□□□□ -1.15
CLDND1-225ENST00000512147 DDTLA6NHG4 134 aaPredicted RBP7.85□□□□□ -1.15
CLDND1-225ENST00000512147 USP17L15C9J2P7 530 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 USP17L13C9JLJ4 530 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 USP17L11C9JVI0 530 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 USP17L18D6R9N7 530 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 USP17L22D6RA61 530 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 USP17L17D6RBQ6 530 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 USP17L19D6RCP7 530 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 USP17L20D6RJB6 530 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 PLIN1O60240 522 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 ARP10275 920 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 CYP2C9P11712 490 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 CCR10P46092 362 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 SPEM2Q0P670 501 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 USP17L24Q0WX57 530 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 RRP1BQ14684 758 aaKnown RBP7.85□□□□□ -1.15
CLDND1-225ENST00000512147 COL28A1Q2UY09 1125 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 ALDH1L2Q3SY69 923 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 CXCL17Q6UXB2 119 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 G2E3Q7L622 706 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 SH3BP5LQ7L8J4 393 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 TMEM192Q8IY95 271 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 MRPL50Q8N5N7 158 aaKnown RBP7.85□□□□□ -1.15
CLDND1-225ENST00000512147 GATA6Q92908 595 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 LMAN2LQ9H0V9 348 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 SMOC2Q9H3U7 446 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 RNF216Q9NWF9 866 aaPredicted RBP7.85□□□□□ -1.15
CLDND1-225ENST00000512147 IQSEC3Q9UPP2 1182 aaPredicted RBP7.85□□□□□ -1.15
CLDND1-225ENST00000512147 SMG5Q9UPR3 1016 aaKnown RBP7.85□□□□□ -1.15
CLDND1-225ENST00000512147 NR2E1Q9Y466 385 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 DOCK2Q92608 1830 aa7.85□□□□□ -1.15
CLDND1-225ENST00000512147 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.84□□□□□ -1.15
CLDND1-225ENST00000512147 BCAR3O75815 825 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 PRB1P04280 392 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 FCER1AP12319 257 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 ERCC3P19447 782 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 RFX1P22670 979 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 SP100P23497 879 aaPredicted RBP7.84□□□□□ -1.15
CLDND1-225ENST00000512147 GJA9P57773 515 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 TBC1D8BQ0IIM8 1120 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 UBE4AQ14139 1066 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 FBXO11Q86XK2 927 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 C1orf210Q8IVY1 113 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 ZFP91Q96JP5 570 aaPredicted RBP7.84□□□□□ -1.15
CLDND1-225ENST00000512147 MOV10L1Q9BXT6 1211 aaKnown RBP7.84□□□□□ -1.15
CLDND1-225ENST00000512147 STK31Q9BXU1 1019 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 MROH8Q9H579 483 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 PHAXQ9H814 394 aaKnown RBP7.84□□□□□ -1.15
CLDND1-225ENST00000512147 TSHZ2Q9NRE2 1034 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 RXFP3Q9NSD7 469 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 HYPKQ9NX55 129 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 SCN5AQ14524 2016 aa7.84□□□□□ -1.15
CLDND1-225ENST00000512147 CREBBPQ92793 2442 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 ZNF236Q9UL36 1845 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 ABHD14A-ACY1A0A1B0GW23 586 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 FAM196BA6NMK8 535 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 TBC1D4O60343 1298 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 EFCAB14O75071 495 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 SMPD1P17405 629 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 FOXC1Q12948 553 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 LBX2Q6XYB7 198 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 EFHBQ8N7U6 833 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 SUSD6Q92537 303 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 IDI2Q9BXS1 227 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 UPF3AQ9H1J1 476 aaKnown RBP7.83□□□□□ -1.16
CLDND1-225ENST00000512147 ALDH8A1Q9H2A2 487 aaPredicted RBP7.83□□□□□ -1.16
CLDND1-225ENST00000512147 SMC4Q9NTJ3 1288 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 RCAN3Q9UKA8 241 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 FBXL21Q9UKT6 434 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 ASXL3Q9C0F0 2248 aa7.83□□□□□ -1.16
CLDND1-225ENST00000512147 ANKRD18BA2A2Z9 1011 aa7.82□□□□□ -1.16
CLDND1-225ENST00000512147 PITPNM1O00562 1244 aa7.82□□□□□ -1.16
CLDND1-225ENST00000512147 FOXD2O60548 495 aaPredicted RBP7.82□□□□□ -1.16
CLDND1-225ENST00000512147 ASNSP08243 561 aa7.82□□□□□ -1.16
CLDND1-225ENST00000512147 SPINK2P20155 84 aa7.82□□□□□ -1.16
CLDND1-225ENST00000512147 FLIIQ13045 1269 aa7.82□□□□□ -1.16
CLDND1-225ENST00000512147 USP17L2Q6R6M4 530 aa7.82□□□□□ -1.16
CLDND1-225ENST00000512147 CATSPERGQ6ZRH7 1159 aa7.82□□□□□ -1.16
CLDND1-225ENST00000512147 SIX5Q8N196 739 aa7.82□□□□□ -1.16
CLDND1-225ENST00000512147 EPC1Q9H2F5 836 aa7.82□□□□□ -1.16
CLDND1-225ENST00000512147 ERVK-5Q9HDB9 667 aa7.82□□□□□ -1.16
CLDND1-225ENST00000512147 EMILIN3Q9NT22 766 aa7.82□□□□□ -1.16
CLDND1-225ENST00000512147 ZHX1Q9UKY1 873 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms