RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 SMIM24O75264 130 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 CHMLP26374 656 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 PCK1P35558 622 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 MYL5Q02045 173 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 RINT1Q6NUQ1 792 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 NBPF11Q86T75 865 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 NDUFAF2Q8N183 169 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 FAM149B1Q96BN6 582 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 ZBTB9Q96C00 473 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 SPATA17Q96L03 361 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 TEKT3Q9BXF9 490 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 PPP1R12CQ9BZL4 782 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 KDM3AQ9Y4C1 1321 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 RRP9O43818 475 aaKnown RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 PPFIA4O75335 1185 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 RECQLP46063 649 aaPredicted RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 PAK1Q13153 545 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 CCDC93Q567U6 631 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 IGSF22Q8N9C0 903 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 APPBP2Q92624 585 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 TMEM106CQ9BVX2 250 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 VPS18Q9P253 973 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 ZNF233A6NK53 670 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 K7ENM7 598 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 NVLO15381 856 aaKnown RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 PHBP35232 272 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 GARSP41250 739 aaKnown RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 EIF4A1P60842 406 aaKnown RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 KRT24Q2M2I5 525 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 ARMCX5Q6P1M9 558 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 ZNF790Q6PG37 636 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 KRT26Q7Z3Y9 468 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 PEX26Q7Z412 305 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 PHLDB2Q86SQ0 1253 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 FBXO11Q86XK2 927 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 C2orf69Q8N8R5 385 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 MTRQ99707 1265 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 THRAP3Q9Y2W1 955 aaKnown RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 IBTKQ9P2D0 1353 aaPredicted RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 DLATP10515 647 aaKnown RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 BCAMP50895 628 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 ICA1Q05084 483 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 ODR4Q5SWX8 454 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 TRPC5Q9UL62 973 aaPredicted RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 WDR17Q8IZU2 1322 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 ARHGEF40Q8TER5 1519 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 HNRNPCL2B2RXH8 293 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 GPAA1O43292 621 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 HNRNPCL1O60812 293 aaKnown RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 GPC4O75487 556 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 ZNF18P17022 549 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 GBP1P32455 592 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 IREB2P48200 963 aaKnown RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 DBN1Q16643 649 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 MAP3K21Q5TCX8 1036 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.33□□□□□ -1.4
USP38-203ENST00000511739 DDX27Q96GQ7 796 aaKnown RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 RSRC1Q96IZ7 334 aaKnown RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 FGD4Q96M96 766 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 BAG1Q99933 345 aaPredicted RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 SYNDIG1Q9H7V2 258 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 ANGEL1Q9UNK9 670 aaKnown RBP6.33□□□□□ -1.4
USP38-203ENST00000511739 MROH5Q6ZUA9 1318 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 SMCO2A6NFE2 343 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 INO80B-WBP1J3KQ70 363 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 PTPRMP28827 1452 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 GNL1P36915 607 aaPredicted RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 MAGEA1P43355 309 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 USP14P54578 494 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 TYRO3Q06418 890 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 PPP2R5BQ15173 497 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 CYP26C1Q6V0L0 522 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 DIS3L2Q8IYB7 885 aaKnown RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 GOLGA5Q8TBA6 731 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 RNF139Q8WU17 664 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 INO80BQ9C086 356 aaPredicted RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 PSTPIP2Q9H939 334 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 ATF5Q9Y2D1 282 aaPredicted RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 USP31Q70CQ4 1352 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 PRR36Q9H6K5 1346 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 A0A1B0GVL5 298 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 NEMP1O14524 444 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 HOXD10P28358 340 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 SFMBT2Q5VUG0 894 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 G2E3Q7L622 706 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 MAP7D3Q8IWC1 876 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 LMNTD2Q8IXW0 634 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 IFT20Q8IY31 132 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 TRIML1Q8N9V2 468 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 SPATA5Q8NB90 893 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 CDKL2Q92772 493 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 METTL22Q9BUU2 404 aaPredicted RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 ZNF215Q9UL58 517 aaPredicted RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 SUFUQ9UMX1 484 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 KDRP35968 1356 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 FAM95CA0A1B0GW59 222 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 N4BP1O75113 896 aaKnown RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 SEC24BO95487 1268 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 STAT1P42224 750 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 RPS6KA1Q15418 735 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms