RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 TTC14Q96N46 770 aa18.03■□□□□ 0.48
COL1A1-213ENST00000511732 TSEN34Q9BSV6 310 aaKnown RBP18.03■□□□□ 0.48
COL1A1-213ENST00000511732 CYP39A1Q9NYL5 469 aa18.03■□□□□ 0.48
COL1A1-213ENST00000511732 CTAGE5O15320 804 aa18.02■□□□□ 0.48
COL1A1-213ENST00000511732 GSPT1P15170 499 aaKnown RBP18.02■□□□□ 0.48
COL1A1-213ENST00000511732 ZNF543Q08ER8 600 aa18.02■□□□□ 0.48
COL1A1-213ENST00000511732 ESR2Q92731 530 aa18.02■□□□□ 0.48
COL1A1-213ENST00000511732 BADQ92934 168 aa18.02■□□□□ 0.48
COL1A1-213ENST00000511732 UPF3AQ9H1J1 476 aaKnown RBP18.02■□□□□ 0.48
COL1A1-213ENST00000511732 RNF41Q9H4P4 317 aaPredicted RBP18.02■□□□□ 0.48
COL1A1-213ENST00000511732 HIP1O00291 1037 aa18.01■□□□□ 0.47
COL1A1-213ENST00000511732 C6orf222P0C671 652 aaPredicted RBP18.01■□□□□ 0.47
COL1A1-213ENST00000511732 PTGS1P23219 599 aa18.01■□□□□ 0.47
COL1A1-213ENST00000511732 CST5P28325 142 aaPredicted RBP18.01■□□□□ 0.47
COL1A1-213ENST00000511732 GJA9P57773 515 aa18.01■□□□□ 0.47
COL1A1-213ENST00000511732 GPR153Q6NV75 609 aa18.01■□□□□ 0.47
COL1A1-213ENST00000511732 NSMFQ6X4W1 530 aa18.01■□□□□ 0.47
COL1A1-213ENST00000511732 Q7L0L9 218 aa18.01■□□□□ 0.47
COL1A1-213ENST00000511732 DSCC1Q9BVC3 393 aa18.01■□□□□ 0.47
COL1A1-213ENST00000511732 STARD7Q9NQZ5 370 aa18.01■□□□□ 0.47
COL1A1-213ENST00000511732 MOXD2PA6NHM9 499 aa18■□□□□ 0.47
COL1A1-213ENST00000511732 ASB14A6NK59 587 aa18■□□□□ 0.47
COL1A1-213ENST00000511732 B4E1Z4 1266 aa18■□□□□ 0.47
COL1A1-213ENST00000511732 NFIBO00712 420 aa18■□□□□ 0.47
COL1A1-213ENST00000511732 PQBP1O60828 265 aaKnown RBP18■□□□□ 0.47
COL1A1-213ENST00000511732 KDM4AO75164 1064 aa18■□□□□ 0.47
COL1A1-213ENST00000511732 ASGR1P07306 291 aa18■□□□□ 0.47
COL1A1-213ENST00000511732 CLTBP09497 229 aa18■□□□□ 0.47
COL1A1-213ENST00000511732 BAATQ14032 418 aaPredicted RBP18■□□□□ 0.47
COL1A1-213ENST00000511732 TMEM63BQ5T3F8 832 aa18■□□□□ 0.47
COL1A1-213ENST00000511732 CPVLQ9H3G5 476 aa18■□□□□ 0.47
COL1A1-213ENST00000511732 PDGFCQ9NRA1 345 aa18■□□□□ 0.47
COL1A1-213ENST00000511732 GOLGA8HP0CJ92 632 aa17.99■□□□□ 0.47
COL1A1-213ENST00000511732 NKX3-2P78367 333 aa17.99■□□□□ 0.47
COL1A1-213ENST00000511732 FAAP100Q0VG06 881 aa17.99■□□□□ 0.47
COL1A1-213ENST00000511732 SHHQ15465 462 aa17.99■□□□□ 0.47
COL1A1-213ENST00000511732 C9orf50Q5SZB4 431 aa17.99■□□□□ 0.47
COL1A1-213ENST00000511732 TTC22Q5TAA0 569 aa17.99■□□□□ 0.47
COL1A1-213ENST00000511732 TAPT1Q6NXT6 567 aa17.99■□□□□ 0.47
COL1A1-213ENST00000511732 EEPD1Q7L9B9 569 aa17.99■□□□□ 0.47
COL1A1-213ENST00000511732 ANKRD33Q7Z3H0 272 aa17.99■□□□□ 0.47
COL1A1-213ENST00000511732 DGKHQ86XP1 1220 aa17.99■□□□□ 0.47
COL1A1-213ENST00000511732 NUP133Q8WUM0 1156 aa17.99■□□□□ 0.47
COL1A1-213ENST00000511732 CLEC4DQ8WXI8 215 aa17.99■□□□□ 0.47
COL1A1-213ENST00000511732 GNEQ9Y223 722 aaKnown RBP17.99■□□□□ 0.47
COL1A1-213ENST00000511732 KIAA0355O15063 1070 aa17.98■□□□□ 0.47
COL1A1-213ENST00000511732 BEX3Q00994 111 aa17.98■□□□□ 0.47
COL1A1-213ENST00000511732 TNFAIP2Q03169 654 aa17.98■□□□□ 0.47
COL1A1-213ENST00000511732 FBXO16Q8IX29 292 aaPredicted RBP17.98■□□□□ 0.47
COL1A1-213ENST00000511732 DEFB123Q8N688 67 aa17.98■□□□□ 0.47
COL1A1-213ENST00000511732 PCSK9Q8NBP7 692 aaKnown RBP17.98■□□□□ 0.47
COL1A1-213ENST00000511732 MORC4Q8TE76 937 aa17.98■□□□□ 0.47
COL1A1-213ENST00000511732 ANKS1AQ92625 1134 aa17.98■□□□□ 0.47
COL1A1-213ENST00000511732 TOX2Q96NM4 488 aa17.98■□□□□ 0.47
COL1A1-213ENST00000511732 ZSWIM5Q9P217 1185 aa17.98■□□□□ 0.47
COL1A1-213ENST00000511732 SMPD1P17405 629 aa17.97■□□□□ 0.47
COL1A1-213ENST00000511732 CDK7P50613 346 aa17.97■□□□□ 0.47
COL1A1-213ENST00000511732 IMMTQ16891 758 aaKnown RBP17.97■□□□□ 0.47
COL1A1-213ENST00000511732 GNASQ5JWF2 1037 aa17.97■□□□□ 0.47
COL1A1-213ENST00000511732 SLC30A10Q6XR72 485 aa17.97■□□□□ 0.47
COL1A1-213ENST00000511732 IQCA1Q86XH1 822 aa17.97■□□□□ 0.47
COL1A1-213ENST00000511732 GLT1D1Q96MS3 346 aa17.97■□□□□ 0.47
COL1A1-213ENST00000511732 ZSCAN10Q96SZ4 725 aaPredicted RBP17.97■□□□□ 0.47
COL1A1-213ENST00000511732 UBA5Q9GZZ9 404 aa17.97■□□□□ 0.47
COL1A1-213ENST00000511732 SPC25Q9HBM1 224 aa17.97■□□□□ 0.47
COL1A1-213ENST00000511732 ELP1O95163 1332 aa17.97■□□□□ 0.47
COL1A1-213ENST00000511732 PTPDC1A2A3K4 754 aa17.96■□□□□ 0.47
COL1A1-213ENST00000511732 ALDH5A1P51649 535 aaPredicted RBP17.96■□□□□ 0.47
COL1A1-213ENST00000511732 EPHB4P54760 987 aa17.96■□□□□ 0.47
COL1A1-213ENST00000511732 ENAHQ8N8S7 591 aaPredicted RBP17.96■□□□□ 0.47
COL1A1-213ENST00000511732 PNMA1Q8ND90 353 aa17.96■□□□□ 0.47
COL1A1-213ENST00000511732 TMEM39AQ9NV64 488 aa17.96■□□□□ 0.47
COL1A1-213ENST00000511732 RAG1P15918 1043 aa17.95■□□□□ 0.46
COL1A1-213ENST00000511732 NT5C2P49902 561 aa17.95■□□□□ 0.46
COL1A1-213ENST00000511732 GPATCH4Q5T3I0 446 aaKnown RBP17.95■□□□□ 0.46
COL1A1-213ENST00000511732 NOL8Q76FK4 1167 aaKnown RBP17.95■□□□□ 0.46
COL1A1-213ENST00000511732 TLK2Q86UE8 772 aa17.95■□□□□ 0.46
COL1A1-213ENST00000511732 MTMR10Q9NXD2 777 aa17.95■□□□□ 0.46
COL1A1-213ENST00000511732 CTNNA3Q9UI47 895 aa17.95■□□□□ 0.46
COL1A1-213ENST00000511732 TNKSO95271 1327 aa17.95■□□□□ 0.46
COL1A1-213ENST00000511732 WDR19Q8NEZ3 1342 aa17.95■□□□□ 0.46
COL1A1-213ENST00000511732 DCDC2CA8MYV0 355 aa17.94■□□□□ 0.46
COL1A1-213ENST00000511732 ARVCFO00192 962 aa17.94■□□□□ 0.46
COL1A1-213ENST00000511732 DYNC1LI2O43237 492 aaPredicted RBP17.94■□□□□ 0.46
COL1A1-213ENST00000511732 CALML3P27482 149 aa17.94■□□□□ 0.46
COL1A1-213ENST00000511732 RPS6P62753 249 aaKnown RBP17.94■□□□□ 0.46
COL1A1-213ENST00000511732 CCDC178Q5BJE1 867 aa17.94■□□□□ 0.46
COL1A1-213ENST00000511732 IQSEC1Q6DN90 963 aa17.94■□□□□ 0.46
COL1A1-213ENST00000511732 CXCL17Q6UXB2 119 aa17.94■□□□□ 0.46
COL1A1-213ENST00000511732 RNF207Q6ZRF8 634 aa17.94■□□□□ 0.46
COL1A1-213ENST00000511732 KIAA1211Q6ZU35 1233 aa17.94■□□□□ 0.46
COL1A1-213ENST00000511732 VTI1AQ96AJ9 217 aa17.94■□□□□ 0.46
COL1A1-213ENST00000511732 KAT14Q9H8E8 782 aa17.94■□□□□ 0.46
COL1A1-213ENST00000511732 VTA1Q9NP79 307 aa17.94■□□□□ 0.46
COL1A1-213ENST00000511732 ADD3Q9UEY8 706 aaKnown RBP17.94■□□□□ 0.46
COL1A1-213ENST00000511732 TBX21Q9UL17 535 aa17.94■□□□□ 0.46
COL1A1-213ENST00000511732 A0A0U1RQG5 324 aaPredicted RBP17.93■□□□□ 0.46
COL1A1-213ENST00000511732 CHMLP26374 656 aa17.93■□□□□ 0.46
COL1A1-213ENST00000511732 PTH1RQ03431 593 aa17.93■□□□□ 0.46
COL1A1-213ENST00000511732 FSCN1Q16658 493 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms