RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 EYSQ5T1H1 3165 aa8.27□□□□□ -1.09
COPS4-209ENST00000511653 CDH23Q9H251 3354 aa8.26□□□□□ -1.09
COPS4-209ENST00000511653 NDUFB5O43674 189 aa8.26□□□□□ -1.09
COPS4-209ENST00000511653 CYP2C8P10632 490 aa8.26□□□□□ -1.09
COPS4-209ENST00000511653 PHKA1P46020 1223 aa8.26□□□□□ -1.09
COPS4-209ENST00000511653 ATP2B3Q16720 1220 aa8.26□□□□□ -1.09
COPS4-209ENST00000511653 NOL9Q5SY16 702 aaKnown RBP8.26□□□□□ -1.09
COPS4-209ENST00000511653 GPAT2Q6NUI2 795 aa8.26□□□□□ -1.09
COPS4-209ENST00000511653 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.26□□□□□ -1.09
COPS4-209ENST00000511653 PA2G4Q9UQ80 394 aaKnown RBP8.26□□□□□ -1.09
COPS4-209ENST00000511653 MYPNQ86TC9 1320 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 PLXNB2O15031 1838 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 PHF20L1A8MW92 1017 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 TGFBR3LH3BV60 316 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 BCRP11274 1271 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 ADORA1P30542 326 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 GRK4P32298 578 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 ZEB1P37275 1124 aaPredicted RBP8.25□□□□□ -1.09
COPS4-209ENST00000511653 RGS3P49796 1198 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 PRMT2P55345 433 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 PRKCZQ05513 592 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 DSC3Q14574 896 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 WDR44Q5JSH3 913 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 ALKBH2Q6NS38 261 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 UBE2Q1Q7Z7E8 422 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 CCDC84Q86UT8 332 aaPredicted RBP8.25□□□□□ -1.09
COPS4-209ENST00000511653 USP40Q9NVE5 1235 aa8.25□□□□□ -1.09
COPS4-209ENST00000511653 KIAA1522Q9P206 1035 aaPredicted RBP8.25□□□□□ -1.09
COPS4-209ENST00000511653 A0A1B0GTH6 734 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 A0A1W2PNR3 127 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 LCE2BO14633 110 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 TREHO43280 583 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 LDHBP07195 334 aaKnown RBP8.24□□□□□ -1.09
COPS4-209ENST00000511653 CCL5P13501 91 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 IDH3AP50213 366 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 ARSJQ5FYB0 599 aaPredicted RBP8.24□□□□□ -1.09
COPS4-209ENST00000511653 GJD3Q8N144 294 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 RAET1EQ8TD07 263 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 PARK7Q99497 189 aaKnown RBP8.24□□□□□ -1.09
COPS4-209ENST00000511653 DDX4Q9NQI0 724 aaKnown RBP8.24□□□□□ -1.09
COPS4-209ENST00000511653 HCN2Q9UL51 889 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 GABRQQ9UN88 632 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 FOCADQ5VW36 1801 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 GAKO14976 1311 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 SALL1Q9NSC2 1324 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 PRUNE2Q8WUY3 3088 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 A0A0G2JLL6 359 aaPredicted RBP8.24□□□□□ -1.09
COPS4-209ENST00000511653 E9PSI1 815 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 ERCC3P19447 782 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 MZF1P28698 734 aaPredicted RBP8.24□□□□□ -1.09
COPS4-209ENST00000511653 SLFN5Q08AF3 891 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 RASGRF1Q13972 1273 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 PRRT2Q7Z6L0 340 aaPredicted RBP8.24□□□□□ -1.09
COPS4-209ENST00000511653 GAS2L1Q99501 681 aaPredicted RBP8.24□□□□□ -1.09
COPS4-209ENST00000511653 SMC4Q9NTJ3 1288 aa8.24□□□□□ -1.09
COPS4-209ENST00000511653 LRRFIP2Q9Y608 721 aaKnown RBP8.24□□□□□ -1.09
COPS4-209ENST00000511653 MAST2Q6P0Q8 1798 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 SPTBN5Q9NRC6 3674 aaKnown RBP8.23□□□□□ -1.09
COPS4-209ENST00000511653 DDTLA6NHG4 134 aaPredicted RBP8.23□□□□□ -1.09
COPS4-209ENST00000511653 CXCL11O14625 94 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 CIAO1O76071 339 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 GJB1P08034 283 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 UBTFL1P0CB47 393 aaPredicted RBP8.23□□□□□ -1.09
COPS4-209ENST00000511653 ELNP15502 786 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 GJA8P48165 433 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 TRIP4Q15650 581 aaPredicted RBP8.23□□□□□ -1.09
COPS4-209ENST00000511653 GADL1Q6ZQY3 521 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 BTLAQ7Z6A9 289 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 ZSCAN29Q8IWY8 852 aaPredicted RBP8.23□□□□□ -1.09
COPS4-209ENST00000511653 SCYL3Q8IZE3 742 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 ZNF384Q8TF68 577 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 IDI2Q9BXS1 227 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 NIF3L1Q9GZT8 377 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 RNF208Q9H0X6 261 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 CUEDC1Q9NWM3 386 aaPredicted RBP8.23□□□□□ -1.09
COPS4-209ENST00000511653 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.23□□□□□ -1.09
COPS4-209ENST00000511653 ZHX2Q9Y6X8 837 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 TTC28Q96AY4 2481 aa8.23□□□□□ -1.09
COPS4-209ENST00000511653 DDX60LQ5H9U9 1706 aaKnown RBP8.23□□□□□ -1.09
COPS4-209ENST00000511653 PTPRAP18433 802 aa8.22□□□□□ -1.09
COPS4-209ENST00000511653 FCGRTP55899 365 aa8.22□□□□□ -1.09
COPS4-209ENST00000511653 PICALMQ13492 652 aa8.22□□□□□ -1.09
COPS4-209ENST00000511653 ALDH1L2Q3SY69 923 aa8.22□□□□□ -1.09
COPS4-209ENST00000511653 U2AF1L4Q8WU68 220 aaKnown RBP8.22□□□□□ -1.09
COPS4-209ENST00000511653 DPF3Q92784 378 aa8.22□□□□□ -1.09
COPS4-209ENST00000511653 MEIS3Q99687 375 aa8.22□□□□□ -1.09
COPS4-209ENST00000511653 PRO3102Q9H379 93 aa8.22□□□□□ -1.09
COPS4-209ENST00000511653 GNL3LQ9NVN8 582 aaKnown RBP8.22□□□□□ -1.09
COPS4-209ENST00000511653 DENND2AQ9ULE3 1009 aa8.22□□□□□ -1.09
COPS4-209ENST00000511653 AFG3L2Q9Y4W6 797 aa8.22□□□□□ -1.09
COPS4-209ENST00000511653 MROH7-TTC4A0A0A0MT08 1334 aa8.22□□□□□ -1.09
COPS4-209ENST00000511653 TRIM75PA6NK02 468 aa8.21□□□□□ -1.09
COPS4-209ENST00000511653 ENTPD3O75355 529 aa8.21□□□□□ -1.09
COPS4-209ENST00000511653 FARP2O94887 1054 aaPredicted RBP8.21□□□□□ -1.09
COPS4-209ENST00000511653 HOXD10P28358 340 aa8.21□□□□□ -1.09
COPS4-209ENST00000511653 IL15P40933 162 aaPredicted RBP8.21□□□□□ -1.09
COPS4-209ENST00000511653 BTDP43251 543 aa8.21□□□□□ -1.09
COPS4-209ENST00000511653 FLT3LGP49771 235 aa8.21□□□□□ -1.09
COPS4-209ENST00000511653 RHBDL3P58872 404 aa8.21□□□□□ -1.09
COPS4-209ENST00000511653 TIMM10P62072 90 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms