RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 IREB2P48200 963 aaKnown RBP17.3■□□□□ 0.36
SCLT1-209ENST00000511426 MAP3K9P80192 1104 aa17.3■□□□□ 0.36
SCLT1-209ENST00000511426 ZNF174Q15697 407 aa17.3■□□□□ 0.36
SCLT1-209ENST00000511426 TBCKQ8TEA7 893 aa17.3■□□□□ 0.36
SCLT1-209ENST00000511426 GLIS2Q9BZE0 524 aaPredicted RBP17.3■□□□□ 0.36
SCLT1-209ENST00000511426 USP25Q9UHP3 1055 aa17.3■□□□□ 0.36
SCLT1-209ENST00000511426 MRPL11Q9Y3B7 192 aaKnown RBP17.3■□□□□ 0.36
SCLT1-209ENST00000511426 ABCB11O95342 1321 aa17.3■□□□□ 0.36
SCLT1-209ENST00000511426 USP2O75604 605 aaPredicted RBP17.29■□□□□ 0.36
SCLT1-209ENST00000511426 ZNF202O95125 648 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 MTMR2Q13614 643 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 NOM1Q5C9Z4 860 aaKnown RBP17.29■□□□□ 0.36
SCLT1-209ENST00000511426 SH3D19Q5HYK7 790 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 KANK3Q6NY19 840 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 MAF1Q9H063 256 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 GRPEL1Q9HAV7 217 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 BIN2Q9UBW5 565 aaPredicted RBP17.29■□□□□ 0.36
SCLT1-209ENST00000511426 KCNH3Q9ULD8 1083 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 CSADQ9Y600 493 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 MYPNQ86TC9 1320 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 VCAM1P19320 739 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 USP11P51784 963 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 SPP2Q13103 211 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 ZYXQ15942 572 aaKnown RBP17.29■□□□□ 0.36
SCLT1-209ENST00000511426 C4orf32Q8N8J7 132 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 ZKSCAN4Q969J2 545 aaPredicted RBP17.29■□□□□ 0.36
SCLT1-209ENST00000511426 AK8Q96MA6 479 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 FUCA2Q9BTY2 467 aa17.29■□□□□ 0.36
SCLT1-209ENST00000511426 MAP3K20Q9NYL2 800 aaKnown RBP17.29■□□□□ 0.36
SCLT1-209ENST00000511426 PAPPA2Q9BXP8 1791 aa17.28■□□□□ 0.36
SCLT1-209ENST00000511426 ADAMTS3O15072 1205 aa17.28■□□□□ 0.36
SCLT1-209ENST00000511426 NEMFO60524 1076 aa17.28■□□□□ 0.36
SCLT1-209ENST00000511426 ICAM1P05362 532 aa17.28■□□□□ 0.36
SCLT1-209ENST00000511426 DEKP35659 375 aaKnown RBP17.28■□□□□ 0.36
SCLT1-209ENST00000511426 TPRNQ4KMQ1 711 aa17.28■□□□□ 0.36
SCLT1-209ENST00000511426 JAKMIP3Q5VZ66 844 aa17.28■□□□□ 0.36
SCLT1-209ENST00000511426 GAS2L3Q86XJ1 694 aa17.28■□□□□ 0.36
SCLT1-209ENST00000511426 KIFC2Q96AC6 838 aa17.28■□□□□ 0.36
SCLT1-209ENST00000511426 SDF4Q9BRK5 362 aa17.28■□□□□ 0.36
SCLT1-209ENST00000511426 EMILIN3Q9NT22 766 aa17.28■□□□□ 0.36
SCLT1-209ENST00000511426 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.28■□□□□ 0.36
SCLT1-209ENST00000511426 ZHX2Q9Y6X8 837 aa17.28■□□□□ 0.36
SCLT1-209ENST00000511426 MEIS2O14770 477 aa17.27■□□□□ 0.36
SCLT1-209ENST00000511426 CCNT1O60563 726 aaKnown RBP17.27■□□□□ 0.36
SCLT1-209ENST00000511426 TXLNAP40222 546 aa17.27■□□□□ 0.36
SCLT1-209ENST00000511426 LETM2Q2VYF4 491 aa17.27■□□□□ 0.36
SCLT1-209ENST00000511426 PRAMEF18Q5VWM3 479 aa17.27■□□□□ 0.36
SCLT1-209ENST00000511426 SASS6Q6UVJ0 657 aa17.27■□□□□ 0.36
SCLT1-209ENST00000511426 DTHD1Q6ZMT9 781 aa17.27■□□□□ 0.36
SCLT1-209ENST00000511426 CLIC6Q96NY7 704 aa17.27■□□□□ 0.36
SCLT1-209ENST00000511426 CSRNP2Q9H175 543 aa17.27■□□□□ 0.36
SCLT1-209ENST00000511426 EHMT1Q9H9B1 1298 aa17.27■□□□□ 0.36
SCLT1-209ENST00000511426 TMOD4Q9NZQ9 345 aa17.27■□□□□ 0.36
SCLT1-209ENST00000511426 PPP1R9AQ9ULJ8 1098 aa17.27■□□□□ 0.36
SCLT1-209ENST00000511426 AFG3L2Q9Y4W6 797 aa17.27■□□□□ 0.36
SCLT1-209ENST00000511426 SPDYE3A6NKU9 549 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 ADM5C9JUS6 153 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 WNT7AO00755 349 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 OR52Z1P0C646 297 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 OAZ1P54368 228 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 GHRHRQ02643 423 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 CCDC84Q86UT8 332 aaPredicted RBP17.26■□□□□ 0.35
SCLT1-209ENST00000511426 ANKRD13AQ8IZ07 590 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 ANO3Q9BYT9 981 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 SLC38A10Q9HBR0 1119 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 RABGAP1Q9Y3P9 1069 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 CAMK4Q16566 473 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.26■□□□□ 0.35
SCLT1-209ENST00000511426 CDCA5Q96FF9 252 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 SNCAIPQ9Y6H5 919 aa17.26■□□□□ 0.35
SCLT1-209ENST00000511426 CYP3A7-CYP3A51PA0A087WV96 503 aa17.25■□□□□ 0.35
SCLT1-209ENST00000511426 ZBED4O75132 1171 aa17.25■□□□□ 0.35
SCLT1-209ENST00000511426 CYP3A7P24462 503 aa17.25■□□□□ 0.35
SCLT1-209ENST00000511426 SREBF1P36956 1147 aa17.25■□□□□ 0.35
SCLT1-209ENST00000511426 PPATQ06203 517 aa17.25■□□□□ 0.35
SCLT1-209ENST00000511426 VGLL4Q14135 290 aa17.25■□□□□ 0.35
SCLT1-209ENST00000511426 USH1GQ495M9 461 aa17.25■□□□□ 0.35
SCLT1-209ENST00000511426 MCF2L2Q86YR7 1114 aa17.25■□□□□ 0.35
SCLT1-209ENST00000511426 TANGO6Q9C0B7 1094 aa17.25■□□□□ 0.35
SCLT1-209ENST00000511426 RPAP3Q9H6T3 665 aaPredicted RBP17.25■□□□□ 0.35
SCLT1-209ENST00000511426 TMEM260Q9NX78 707 aa17.25■□□□□ 0.35
SCLT1-209ENST00000511426 PHIPQ8WWQ0 1821 aa17.25■□□□□ 0.35
SCLT1-209ENST00000511426 VWA3AA6NCI4 1184 aa17.24■□□□□ 0.35
SCLT1-209ENST00000511426 GCOM1H8Y6P7 765 aaPredicted RBP17.24■□□□□ 0.35
SCLT1-209ENST00000511426 FLOT1O75955 427 aa17.24■□□□□ 0.35
SCLT1-209ENST00000511426 POLR2MP0CAP2 368 aa17.24■□□□□ 0.35
SCLT1-209ENST00000511426 UBE2SQ16763 222 aa17.24■□□□□ 0.35
SCLT1-209ENST00000511426 UVSSAQ2YD98 709 aa17.24■□□□□ 0.35
SCLT1-209ENST00000511426 KRBA2Q6ZNG9 492 aa17.24■□□□□ 0.35
SCLT1-209ENST00000511426 ARMC9Q7Z3E5 817 aa17.24■□□□□ 0.35
SCLT1-209ENST00000511426 LDHDQ86WU2 507 aa17.24■□□□□ 0.35
SCLT1-209ENST00000511426 ERO1BQ86YB8 467 aa17.24■□□□□ 0.35
SCLT1-209ENST00000511426 CNNM3Q8NE01 707 aa17.24■□□□□ 0.35
SCLT1-209ENST00000511426 CRYGNQ8WXF5 182 aa17.24■□□□□ 0.35
SCLT1-209ENST00000511426 MBOAT7Q96N66 472 aa17.24■□□□□ 0.35
SCLT1-209ENST00000511426 FBXO28Q9NVF7 368 aa17.24■□□□□ 0.35
SCLT1-209ENST00000511426 CXCL11O14625 94 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 ATP2A1O14983 1001 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 SLC26A4O43511 780 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms