RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 NFIBO00712 420 aa12.05□□□□□ -0.48
NR1I3-227ENST00000510951 CPLX1O14810 134 aa12.05□□□□□ -0.48
NR1I3-227ENST00000510951 FUT2Q10981 343 aa12.05□□□□□ -0.48
NR1I3-227ENST00000510951 CTU1Q7Z7A3 348 aaKnown RBP12.05□□□□□ -0.48
NR1I3-227ENST00000510951 GPKOWQ92917 476 aaPredicted RBP eCLIP12.05□□□□□ -0.484e-7■■■■■ 40.8
NR1I3-227ENST00000510951 AMNQ9BXJ7 453 aa12.05□□□□□ -0.48
NR1I3-227ENST00000510951 SLC26A6Q9BXS9 759 aa12.05□□□□□ -0.48
NR1I3-227ENST00000510951 ACAD9Q9H845 621 aa12.05□□□□□ -0.48
NR1I3-227ENST00000510951 LIMCH1Q9UPQ0 1083 aa12.05□□□□□ -0.48
NR1I3-227ENST00000510951 LRRC37A2A6NM11 1700 aa12.05□□□□□ -0.48
NR1I3-227ENST00000510951 PFKFB2O60825 505 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 FCER1AP12319 257 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 PTPREP23469 700 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 ADORA2AP29274 412 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 FLT3LGP49771 235 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 ST3GAL1Q11201 340 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 GRB14Q14449 540 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 KCTD2Q14681 263 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 ARHGEF6Q15052 776 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 PPP2R5BQ15173 497 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 TKFCQ3LXA3 575 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 NSMFQ6X4W1 530 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 HEATR3Q7Z4Q2 680 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 CCDC83Q8IWF9 413 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 ANKRD35Q8N283 1001 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 CHST13Q8NET6 341 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 SOCS4Q8WXH5 440 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 GTF3C6Q969F1 213 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 NUDT12Q9BQG2 462 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 SRRDQ9UH36 339 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 PCDHA1Q9Y5I3 950 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 V9GY48 417 aaPredicted RBP12.04□□□□□ -0.48
NR1I3-227ENST00000510951 ABCB11O95342 1321 aa12.04□□□□□ -0.48
NR1I3-227ENST00000510951 PTPDC1A2A3K4 754 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 SLC15A5A6NIM6 579 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 PGK2P07205 417 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 CYP2B6P20813 491 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 HOXD10P28358 340 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 SMARCA1P28370 1054 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 NTRK3Q16288 839 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 MORN1Q5T089 497 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 WWC2Q6AWC2 1192 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 CPLX2Q6PUV4 134 aaKnown RBP12.03□□□□□ -0.48
NR1I3-227ENST00000510951 SLC30A10Q6XR72 485 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 RAET1EQ8TD07 263 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 CLEC4DQ8WXI8 215 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 A1CFQ9NQ94 594 aaKnown RBP12.03□□□□□ -0.48
NR1I3-227ENST00000510951 FBXO40Q9UH90 709 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 PNMA2Q9UL42 364 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 PTCH2Q9Y6C5 1203 aa12.03□□□□□ -0.48
NR1I3-227ENST00000510951 HTTP42858 3142 aa12.02□□□□□ -0.48
NR1I3-227ENST00000510951 COBLO75128 1261 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 CTDNEP1O95476 244 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 GNRH1P01148 92 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 IFNAR1P17181 557 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 RGS2P41220 211 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 AKAP17AQ02040 695 aaKnown RBP12.02□□□□□ -0.49
NR1I3-227ENST00000510951 SSRP1Q08945 709 aaKnown RBP12.02□□□□□ -0.49
NR1I3-227ENST00000510951 MAP2K5Q13163 448 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 DPP9Q86TI2 863 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 TRIM22Q8IYM9 498 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 NPLOC4Q8TAT6 608 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 DDX11Q96FC9 970 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 APBA2Q99767 749 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 GJD2Q9UKL4 321 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 PTPN22Q9Y2R2 807 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 MRPL11Q9Y3B7 192 aaKnown RBP12.02□□□□□ -0.49
NR1I3-227ENST00000510951 PFASO15067 1338 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 FRMPD3Q5JV73 1810 aa12.02□□□□□ -0.49
NR1I3-227ENST00000510951 OPLAHO14841 1288 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 PRPF3O43395 683 aaKnown RBP12.01□□□□□ -0.49
NR1I3-227ENST00000510951 STRNO43815 780 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 JAK2O60674 1132 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 CDKL5O76039 1030 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 SCG2P13521 617 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 ELNP15502 786 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 CALML3P27482 149 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 NAPAP54920 295 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 PKN1Q16512 942 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 CCL14Q16627 93 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 COL13A1Q5TAT6 717 aaPredicted RBP12.01□□□□□ -0.49
NR1I3-227ENST00000510951 RNF207Q6ZRF8 634 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 ABRAQ8N0Z2 381 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 ZSCAN31Q96LW9 406 aaPredicted RBP12.01□□□□□ -0.49
NR1I3-227ENST00000510951 PURBQ96QR8 312 aaKnown RBP12.01□□□□□ -0.49
NR1I3-227ENST00000510951 RNF26Q9BY78 433 aaPredicted RBP12.01□□□□□ -0.49
NR1I3-227ENST00000510951 SH2B1Q9NRF2 756 aaPredicted RBP12.01□□□□□ -0.49
NR1I3-227ENST00000510951 CYP39A1Q9NYL5 469 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 KIAA1217Q5T5P2 1943 aa12.01□□□□□ -0.49
NR1I3-227ENST00000510951 MYH7BA7E2Y1 1941 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 POTEB2H3BUK9 544 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 STXBP3O00186 592 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 CFBP00751 764 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 HOXA13P31271 388 aaPredicted RBP12□□□□□ -0.49
NR1I3-227ENST00000510951 FOSBP53539 338 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 PRMT2P55345 433 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 RPS6P62753 249 aaKnown RBP12□□□□□ -0.49
NR1I3-227ENST00000510951 CNTN2Q02246 1040 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 BAATQ14032 418 aaPredicted RBP12□□□□□ -0.49
NR1I3-227ENST00000510951 PFKFB3Q16875 520 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms