RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 C16orf86Q6ZW13 317 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 SLC17A8Q8NDX2 589 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 GPRC5AQ8NFJ5 357 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 PAGR1Q9BTK6 254 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 EPB41L4AQ9HCS5 686 aaPredicted RBP10.3□□□□□ -0.76
PDPN-209ENST00000510906 GJD2Q9UKL4 321 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 DOLKQ9UPQ8 538 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 INHAP05111 366 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 ZFYP08048 801 aaPredicted RBP10.29□□□□□ -0.76
PDPN-209ENST00000510906 RASA1P20936 1047 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 ERVK-9P63128 1117 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 ERVK-24P63145 666 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 UBXN2AP68543 259 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 CLDN10P78369 228 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 KIAA1755Q5JYT7 1200 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 CATSPERGQ6ZRH7 1159 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 SIAH1Q8IUQ4 282 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 SPNS2Q8IVW8 549 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 AMOTL1Q8IY63 956 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 SHISA4Q96DD7 197 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 SEC62Q99442 399 aaKnown RBP10.29□□□□□ -0.76
PDPN-209ENST00000510906 FSD1Q9BTV5 496 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 PORCNQ9H237 461 aa10.29□□□□□ -0.76
PDPN-209ENST00000510906 RPAP3Q9H6T3 665 aaPredicted RBP10.29□□□□□ -0.76
PDPN-209ENST00000510906 ARPP21Q9UBL0 812 aaPredicted RBP10.29□□□□□ -0.76
PDPN-209ENST00000510906 CNMDO75829 334 aa10.28□□□□□ -0.76
PDPN-209ENST00000510906 GGCXP38435 758 aa10.28□□□□□ -0.76
PDPN-209ENST00000510906 SKOR1P84550 965 aa10.28□□□□□ -0.76
PDPN-209ENST00000510906 ICA1Q05084 483 aa10.28□□□□□ -0.76
PDPN-209ENST00000510906 SBK1Q52WX2 424 aa10.28□□□□□ -0.76
PDPN-209ENST00000510906 STK11IPQ8N1F8 1099 aa10.28□□□□□ -0.76
PDPN-209ENST00000510906 EXOC6Q8TAG9 804 aa10.28□□□□□ -0.76
PDPN-209ENST00000510906 GTF3C2Q8WUA4 911 aaPredicted RBP10.28□□□□□ -0.76
PDPN-209ENST00000510906 CCDC17Q96LX7 622 aa10.28□□□□□ -0.76
PDPN-209ENST00000510906 RNF208Q9H0X6 261 aa10.28□□□□□ -0.76
PDPN-209ENST00000510906 MAP4K5Q9Y4K4 846 aa10.28□□□□□ -0.76
PDPN-209ENST00000510906 MINDY4BA8MYZ0 360 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 ZBTB24O43167 697 aaPredicted RBP10.27□□□□□ -0.77
PDPN-209ENST00000510906 DKK1O94907 266 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 GJB1P08034 283 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 CYP2B6P20813 491 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 GJA8P48165 433 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 RPIAP49247 311 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 PDE1AP54750 535 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 ATP2B2Q01814 1243 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 LRRFIP1Q32MZ4 808 aaKnown RBP10.27□□□□□ -0.77
PDPN-209ENST00000510906 ZMYM1Q5SVZ6 1142 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 GIMAP6Q6P9H5 292 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 TRIM50Q86XT4 487 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 SPICE1Q8N0Z3 855 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 TANGO6Q9C0B7 1094 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 LNPKQ9C0E8 428 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 ARHGEF10LQ9HCE6 1279 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 BTBD7Q9P203 1132 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 STAP2Q9UGK3 403 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 NOD1Q9Y239 953 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 TMX2Q9Y320 296 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 RABGAP1Q9Y3P9 1069 aa10.27□□□□□ -0.77
PDPN-209ENST00000510906 RBBP6Q7Z6E9 1792 aaKnown RBP10.26□□□□□ -0.77
PDPN-209ENST00000510906 CENPFP49454 3210 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 IGHDP01880 384 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 APPP05067 770 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 EEF2P13639 858 aaKnown RBP10.26□□□□□ -0.77
PDPN-209ENST00000510906 GNAT2P19087 354 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 VARSP26640 1264 aaKnown RBP10.26□□□□□ -0.77
PDPN-209ENST00000510906 MAPK4P31152 587 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 TDO2P48775 406 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 AAMPQ13685 434 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 B4GALNT3Q6L9W6 998 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 PPP1R18Q6NYC8 613 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 LBX2Q6XYB7 198 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 CCDC129Q6ZRS4 1044 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 GPR142Q7Z601 462 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 PLEKHH3Q7Z736 793 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 ANKMY2Q8IV38 441 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 CCAR1Q8IX12 1150 aaKnown RBP10.26□□□□□ -0.77
PDPN-209ENST00000510906 SMC5Q8IY18 1101 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 IFNL3Q8IZI9 196 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 SIX5Q8N196 739 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 U2AF1L4Q8WU68 220 aaKnown RBP10.26□□□□□ -0.77
PDPN-209ENST00000510906 TRIB2Q92519 343 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 VCPKMTQ9H867 229 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 ROBO3Q96MS0 1386 aa10.26□□□□□ -0.77
PDPN-209ENST00000510906 MGAMO43451 1857 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 BAZ2AQ9UIF9 1905 aaKnown RBP10.25□□□□□ -0.77
PDPN-209ENST00000510906 PRDM1O75626 825 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 HMGCRP04035 888 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 ATP1A2P50993 1020 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 COG2Q14746 738 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 WDR78Q5VTH9 848 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 SOCS4Q8WXH5 440 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 LPAR1Q92633 364 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 USP6NLQ92738 828 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 DEFB118Q96PH6 123 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 RWDD1Q9H446 243 aaPredicted RBP10.25□□□□□ -0.77
PDPN-209ENST00000510906 SH2D4AQ9H788 454 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 KANSL2Q9H9L4 492 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 MKNK2Q9HBH9 465 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 PAK6Q9NQU5 681 aaPredicted RBP10.25□□□□□ -0.77
PDPN-209ENST00000510906 SUPT16HQ9Y5B9 1047 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms