RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 RWDD1Q9H446 243 aaPredicted RBP18.18■□□□□ 0.5
SMAD5-205ENST00000509297 OSBPL3Q9H4L5 887 aa18.18■□□□□ 0.5
SMAD5-205ENST00000509297 CCPG1Q9ULG6 757 aa18.18■□□□□ 0.5
SMAD5-205ENST00000509297 GNEQ9Y223 722 aaKnown RBP18.18■□□□□ 0.5
SMAD5-205ENST00000509297 ASTN1O14525 1302 aa18.18■□□□□ 0.5
SMAD5-205ENST00000509297 CCDC171Q6TFL3 1326 aa18.18■□□□□ 0.5
SMAD5-205ENST00000509297 UNC80Q8N2C7 3258 aa18.18■□□□□ 0.5
SMAD5-205ENST00000509297 TMEM265A0A087WTH1 108 aa18.17■□□□□ 0.5
SMAD5-205ENST00000509297 A0A0U1RQG5 324 aaPredicted RBP18.17■□□□□ 0.5
SMAD5-205ENST00000509297 ARVCFO00192 962 aa18.17■□□□□ 0.5
SMAD5-205ENST00000509297 CABYRO75952 493 aa18.17■□□□□ 0.5
SMAD5-205ENST00000509297 EPHB4P54760 987 aa18.17■□□□□ 0.5
SMAD5-205ENST00000509297 MFAP1P55081 439 aaKnown RBP18.17■□□□□ 0.5
SMAD5-205ENST00000509297 NMIQ13287 307 aaPredicted RBP18.17■□□□□ 0.5
SMAD5-205ENST00000509297 CCDC96Q2M329 555 aa18.17■□□□□ 0.5
SMAD5-205ENST00000509297 CCDC174Q6PII3 467 aa18.17■□□□□ 0.5
SMAD5-205ENST00000509297 ZNF589Q86UQ0 364 aaPredicted RBP18.17■□□□□ 0.5
SMAD5-205ENST00000509297 SEZ6LQ9BYH1 1024 aa18.17■□□□□ 0.5
SMAD5-205ENST00000509297 LNPKQ9C0E8 428 aa18.17■□□□□ 0.5
SMAD5-205ENST00000509297 Q9Y3F1 56 aa18.17■□□□□ 0.5
SMAD5-205ENST00000509297 MCM3APO60318 1980 aa18.17■□□□□ 0.5
SMAD5-205ENST00000509297 IRX5P78411 483 aaPredicted RBP18.16■□□□□ 0.5
SMAD5-205ENST00000509297 MUM1L1Q5H9M0 696 aa18.16■□□□□ 0.5
SMAD5-205ENST00000509297 AKNAD1Q5T1N1 836 aa18.16■□□□□ 0.5
SMAD5-205ENST00000509297 SYDE2Q5VT97 1194 aa18.16■□□□□ 0.5
SMAD5-205ENST00000509297 IQSEC1Q6DN90 963 aa18.16■□□□□ 0.5
SMAD5-205ENST00000509297 MFSD5Q6N075 450 aa18.16■□□□□ 0.5
SMAD5-205ENST00000509297 RASGRP2Q7LDG7 609 aa18.16■□□□□ 0.5
SMAD5-205ENST00000509297 SLC43A3Q8NBI5 491 aa18.16■□□□□ 0.5
SMAD5-205ENST00000509297 RNPC3Q96LT9 517 aaKnown RBP18.16■□□□□ 0.5
SMAD5-205ENST00000509297 RNF41Q9H4P4 317 aaPredicted RBP18.16■□□□□ 0.5
SMAD5-205ENST00000509297 VTA1Q9NP79 307 aa18.16■□□□□ 0.5
SMAD5-205ENST00000509297 TOMM22Q9NS69 142 aa18.16■□□□□ 0.5
SMAD5-205ENST00000509297 TRIM6-TRIM34B2RNG4 842 aa18.15■□□□□ 0.5
SMAD5-205ENST00000509297 DLL1O00548 723 aa18.15■□□□□ 0.5
SMAD5-205ENST00000509297 SNHG28P0DPA3 235 aa18.15■□□□□ 0.5
SMAD5-205ENST00000509297 SNAP25P60880 206 aa18.15■□□□□ 0.5
SMAD5-205ENST00000509297 RRP12Q5JTH9 1297 aaKnown RBP18.15■□□□□ 0.5
SMAD5-205ENST00000509297 TAPT1Q6NXT6 567 aa18.15■□□□□ 0.5
SMAD5-205ENST00000509297 MFSD6Q6ZSS7 791 aa18.15■□□□□ 0.5
SMAD5-205ENST00000509297 FAM126BQ8IXS8 530 aa18.15■□□□□ 0.5
SMAD5-205ENST00000509297 CHMP4CQ96CF2 233 aa18.15■□□□□ 0.5
SMAD5-205ENST00000509297 SEMA6BQ9H3T3 888 aa18.15■□□□□ 0.5
SMAD5-205ENST00000509297 ADD3Q9UEY8 706 aaKnown RBP18.15■□□□□ 0.5
SMAD5-205ENST00000509297 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.14■□□□□ 0.49
SMAD5-205ENST00000509297 PDHBP11177 359 aa18.14■□□□□ 0.49
SMAD5-205ENST00000509297 SDSP20132 328 aa18.14■□□□□ 0.49
SMAD5-205ENST00000509297 NUCB1Q02818 461 aa18.14■□□□□ 0.49
SMAD5-205ENST00000509297 FSCN1Q16658 493 aaKnown RBP18.14■□□□□ 0.49
SMAD5-205ENST00000509297 TTBK2Q6IQ55 1244 aa18.14■□□□□ 0.49
SMAD5-205ENST00000509297 NSMFQ6X4W1 530 aa18.14■□□□□ 0.49
SMAD5-205ENST00000509297 TLK2Q86UE8 772 aa18.14■□□□□ 0.49
SMAD5-205ENST00000509297 CHD1LQ86WJ1 897 aa18.14■□□□□ 0.49
SMAD5-205ENST00000509297 VTI1AQ96AJ9 217 aa18.14■□□□□ 0.49
SMAD5-205ENST00000509297 AP5M1Q9H0R1 490 aa18.14■□□□□ 0.49
SMAD5-205ENST00000509297 LRRC37A2A6NM11 1700 aa18.14■□□□□ 0.49
SMAD5-205ENST00000509297 TLR3O15455 904 aaKnown RBP18.13■□□□□ 0.49
SMAD5-205ENST00000509297 ZEB2O60315 1214 aa18.13■□□□□ 0.49
SMAD5-205ENST00000509297 CD4P01730 458 aa18.13■□□□□ 0.49
SMAD5-205ENST00000509297 SMPD1P17405 629 aa18.13■□□□□ 0.49
SMAD5-205ENST00000509297 SLC16A2P36021 539 aa18.13■□□□□ 0.49
SMAD5-205ENST00000509297 ZNF543Q08ER8 600 aa18.13■□□□□ 0.49
SMAD5-205ENST00000509297 PPIGQ13427 754 aaKnown RBP eCLIP18.13■□□□□ 0.49
SMAD5-205ENST00000509297 NOL8Q76FK4 1167 aaKnown RBP18.13■□□□□ 0.49
SMAD5-205ENST00000509297 PLEKHM2Q8IWE5 1019 aa18.13■□□□□ 0.49
SMAD5-205ENST00000509297 ESR2Q92731 530 aa18.13■□□□□ 0.49
SMAD5-205ENST00000509297 RILPL2Q969X0 211 aa18.13■□□□□ 0.49
SMAD5-205ENST00000509297 CDX2Q99626 313 aaPredicted RBP18.13■□□□□ 0.49
SMAD5-205ENST00000509297 MAF1Q9H063 256 aa18.13■□□□□ 0.49
SMAD5-205ENST00000509297 MTMR7Q9Y216 660 aa18.13■□□□□ 0.49
SMAD5-205ENST00000509297 WDR19Q8NEZ3 1342 aa18.13■□□□□ 0.49
SMAD5-205ENST00000509297 HAND2P61296 217 aa18.12■□□□□ 0.49
SMAD5-205ENST00000509297 BEX3Q00994 111 aa18.12■□□□□ 0.49
SMAD5-205ENST00000509297 BAATQ14032 418 aaPredicted RBP18.12■□□□□ 0.49
SMAD5-205ENST00000509297 DGKHQ86XP1 1220 aa18.12■□□□□ 0.49
SMAD5-205ENST00000509297 TBC1D10CQ8IV04 446 aa18.12■□□□□ 0.49
SMAD5-205ENST00000509297 FAM161BQ96MY7 647 aa18.12■□□□□ 0.49
SMAD5-205ENST00000509297 TTYH1Q9H313 450 aaPredicted RBP18.12■□□□□ 0.49
SMAD5-205ENST00000509297 CDH23Q9H251 3354 aa18.11■□□□□ 0.49
SMAD5-205ENST00000509297 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.11■□□□□ 0.49
SMAD5-205ENST00000509297 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.11■□□□□ 0.49
SMAD5-205ENST00000509297 RBM47A0AV96 593 aaKnown RBP18.11■□□□□ 0.49
SMAD5-205ENST00000509297 HIP1O00291 1037 aa18.11■□□□□ 0.49
SMAD5-205ENST00000509297 NFIBO00712 420 aa18.11■□□□□ 0.49
SMAD5-205ENST00000509297 ALDH5A1P51649 535 aaPredicted RBP18.11■□□□□ 0.49
SMAD5-205ENST00000509297 DUSP28Q4G0W2 176 aa18.11■□□□□ 0.49
SMAD5-205ENST00000509297 CCDC178Q5BJE1 867 aa18.11■□□□□ 0.49
SMAD5-205ENST00000509297 GPATCH4Q5T3I0 446 aaKnown RBP18.11■□□□□ 0.49
SMAD5-205ENST00000509297 RASIP1Q5U651 963 aa18.11■□□□□ 0.49
SMAD5-205ENST00000509297 CXCL17Q6UXB2 119 aa18.11■□□□□ 0.49
SMAD5-205ENST00000509297 FBXO16Q8IX29 292 aaPredicted RBP18.11■□□□□ 0.49
SMAD5-205ENST00000509297 TMEM199Q8N511 208 aa18.11■□□□□ 0.49
SMAD5-205ENST00000509297 CLEC4DQ8WXI8 215 aa18.11■□□□□ 0.49
SMAD5-205ENST00000509297 GPCPD1Q9NPB8 672 aa18.11■□□□□ 0.49
SMAD5-205ENST00000509297 PDGFCQ9NRA1 345 aa18.11■□□□□ 0.49
SMAD5-205ENST00000509297 EYSQ5T1H1 3165 aa18.1■□□□□ 0.49
SMAD5-205ENST00000509297 FRMPD2Q68DX3 1309 aaPredicted RBP18.1■□□□□ 0.49
SMAD5-205ENST00000509297 ZNF213O14771 459 aa18.1■□□□□ 0.49
SMAD5-205ENST00000509297 DYNC1LI2O43237 492 aaPredicted RBP18.1■□□□□ 0.49
SMAD5-205ENST00000509297 ITGA7Q13683 1181 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms