RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 ASTN1O14525 1302 aa14.72□□□□□ -0.05
PDPN-208ENST00000509009 ZNF213O14771 459 aa14.72□□□□□ -0.05
PDPN-208ENST00000509009 KIAA0355O15063 1070 aa14.72□□□□□ -0.05
PDPN-208ENST00000509009 CTAGE5O15320 804 aa14.72□□□□□ -0.05
PDPN-208ENST00000509009 PQBP1O60828 265 aaKnown RBP14.72□□□□□ -0.05
PDPN-208ENST00000509009 ASGR1P07306 291 aa14.72□□□□□ -0.05
PDPN-208ENST00000509009 CLTBP09497 229 aa14.72□□□□□ -0.05
PDPN-208ENST00000509009 C6orf222P0C671 652 aaPredicted RBP14.72□□□□□ -0.05
PDPN-208ENST00000509009 CDK7P50613 346 aa14.72□□□□□ -0.05
PDPN-208ENST00000509009 NKX3-2P78367 333 aa14.72□□□□□ -0.05
PDPN-208ENST00000509009 TNFAIP2Q03169 654 aa14.72□□□□□ -0.05
PDPN-208ENST00000509009 FAAP100Q0VG06 881 aa14.72□□□□□ -0.05
PDPN-208ENST00000509009 GNASQ5JWF2 1037 aa14.72□□□□□ -0.05
PDPN-208ENST00000509009 C9orf50Q5SZB4 431 aa14.72□□□□□ -0.05
PDPN-208ENST00000509009 PCSK9Q8NBP7 692 aaKnown RBP14.72□□□□□ -0.05
PDPN-208ENST00000509009 PURBQ96QR8 312 aaKnown RBP14.72□□□□□ -0.05
PDPN-208ENST00000509009 RNF41Q9H4P4 317 aaPredicted RBP14.72□□□□□ -0.05
PDPN-208ENST00000509009 SPC25Q9HBM1 224 aa14.72□□□□□ -0.05
PDPN-208ENST00000509009 SUPT16HQ9Y5B9 1047 aaKnown RBP14.72□□□□□ -0.05
PDPN-208ENST00000509009 DDX49Q9Y6V7 483 aaKnown RBP14.72□□□□□ -0.05
PDPN-208ENST00000509009 ELP1O95163 1332 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 FRMPD2Q68DX3 1309 aaPredicted RBP14.71□□□□□ -0.05
PDPN-208ENST00000509009 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.71□□□□□ -0.05
PDPN-208ENST00000509009 DCDC2CA8MYV0 355 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 SNHG28P0DPA3 235 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 PDHBP11177 359 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 ZNF543Q08ER8 600 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 BAATQ14032 418 aaPredicted RBP14.71□□□□□ -0.05
PDPN-208ENST00000509009 TAPT1Q6NXT6 567 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 NSMFQ6X4W1 530 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 ESR2Q92731 530 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 VTI1AQ96AJ9 217 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 GLT1D1Q96MS3 346 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 ZKSCAN3Q9BRR0 538 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 PDGFCQ9NRA1 345 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 DIAPH3Q9NSV4 1193 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 TMEM39AQ9NV64 488 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 GNEQ9Y223 722 aaKnown RBP14.71□□□□□ -0.05
PDPN-208ENST00000509009 COL6A3P12111 3177 aa14.71□□□□□ -0.05
PDPN-208ENST00000509009 HIP1O00291 1037 aa14.7□□□□□ -0.06
PDPN-208ENST00000509009 IQSEC1Q6DN90 963 aa14.7□□□□□ -0.06
PDPN-208ENST00000509009 FAM109BQ6ICB4 259 aaPredicted RBP14.7□□□□□ -0.06
PDPN-208ENST00000509009 NOL8Q76FK4 1167 aaKnown RBP14.7□□□□□ -0.06
PDPN-208ENST00000509009 DGKHQ86XP1 1220 aa14.7□□□□□ -0.06
PDPN-208ENST00000509009 MORC4Q8TE76 937 aa14.7□□□□□ -0.06
PDPN-208ENST00000509009 CLEC4DQ8WXI8 215 aa14.7□□□□□ -0.06
PDPN-208ENST00000509009 ANKS1AQ92625 1134 aa14.7□□□□□ -0.06
PDPN-208ENST00000509009 NEDD4P46934 1319 aa14.69□□□□□ -0.06
PDPN-208ENST00000509009 NFIBO00712 420 aa14.69□□□□□ -0.06
PDPN-208ENST00000509009 DYNC1LI2O43237 492 aaPredicted RBP14.69□□□□□ -0.06
PDPN-208ENST00000509009 RAG1P15918 1043 aa14.69□□□□□ -0.06
PDPN-208ENST00000509009 SMPD1P17405 629 aa14.69□□□□□ -0.06
PDPN-208ENST00000509009 EPHB4P54760 987 aa14.69□□□□□ -0.06
PDPN-208ENST00000509009 BEX3Q00994 111 aa14.69□□□□□ -0.06
PDPN-208ENST00000509009 EEPD1Q7L9B9 569 aa14.69□□□□□ -0.06
PDPN-208ENST00000509009 DSCC1Q9BVC3 393 aa14.69□□□□□ -0.06
PDPN-208ENST00000509009 MCM3APO60318 1980 aa14.69□□□□□ -0.06
PDPN-208ENST00000509009 ARVCFO00192 962 aa14.68□□□□□ -0.06
PDPN-208ENST00000509009 KDM4AO75164 1064 aa14.68□□□□□ -0.06
PDPN-208ENST00000509009 GOLGA8HP0CJ92 632 aa14.68□□□□□ -0.06
PDPN-208ENST00000509009 PTGS1P23219 599 aa14.68□□□□□ -0.06
PDPN-208ENST00000509009 PDE4AP27815 886 aa14.68□□□□□ -0.06
PDPN-208ENST00000509009 NT5C2P49902 561 aa14.68□□□□□ -0.06
PDPN-208ENST00000509009 CCDC178Q5BJE1 867 aa14.68□□□□□ -0.06
PDPN-208ENST00000509009 TMEM63BQ5T3F8 832 aa14.68□□□□□ -0.06
PDPN-208ENST00000509009 SLC17A8Q8NDX2 589 aa14.68□□□□□ -0.06
PDPN-208ENST00000509009 ZSWIM5Q9P217 1185 aa14.68□□□□□ -0.06
PDPN-208ENST00000509009 ADD3Q9UEY8 706 aaKnown RBP14.68□□□□□ -0.06
PDPN-208ENST00000509009 CTNNA3Q9UI47 895 aa14.68□□□□□ -0.06
PDPN-208ENST00000509009 PNMA2Q9UL42 364 aa14.68□□□□□ -0.06
PDPN-208ENST00000509009 STXBP5LQ9Y2K9 1186 aa14.68□□□□□ -0.06
PDPN-208ENST00000509009 A0A0U1RQG5 324 aaPredicted RBP14.67□□□□□ -0.06
PDPN-208ENST00000509009 B4E1Z4 1266 aa14.67□□□□□ -0.06
PDPN-208ENST00000509009 TIMP1P01033 207 aa14.67□□□□□ -0.06
PDPN-208ENST00000509009 FSCN1Q16658 493 aaKnown RBP14.67□□□□□ -0.06
PDPN-208ENST00000509009 GPATCH4Q5T3I0 446 aaKnown RBP14.67□□□□□ -0.06
PDPN-208ENST00000509009 CXCL17Q6UXB2 119 aa14.67□□□□□ -0.06
PDPN-208ENST00000509009 KIAA1211Q6ZU35 1233 aa14.67□□□□□ -0.06
PDPN-208ENST00000509009 IQCA1Q86XH1 822 aa14.67□□□□□ -0.06
PDPN-208ENST00000509009 UBA5Q9GZZ9 404 aa14.67□□□□□ -0.06
PDPN-208ENST00000509009 AP5M1Q9H0R1 490 aa14.67□□□□□ -0.06
PDPN-208ENST00000509009 VTA1Q9NP79 307 aa14.67□□□□□ -0.06
PDPN-208ENST00000509009 TBX21Q9UL17 535 aa14.67□□□□□ -0.06
PDPN-208ENST00000509009 Q9Y3F1 56 aa14.67□□□□□ -0.06
PDPN-208ENST00000509009 LOC102724159A0A0B4J2E5 919 aa14.66□□□□□ -0.06
PDPN-208ENST00000509009 PTPDC1A2A3K4 754 aa14.66□□□□□ -0.06
PDPN-208ENST00000509009 CALML3P27482 149 aa14.66□□□□□ -0.06
PDPN-208ENST00000509009 ALDH5A1P51649 535 aaPredicted RBP14.66□□□□□ -0.06
PDPN-208ENST00000509009 FPGSQ05932 587 aa14.66□□□□□ -0.06
PDPN-208ENST00000509009 PWP2Q15269 919 aaKnown RBP14.66□□□□□ -0.06
PDPN-208ENST00000509009 IMMTQ16891 758 aaKnown RBP14.66□□□□□ -0.06
PDPN-208ENST00000509009 RNF207Q6ZRF8 634 aa14.66□□□□□ -0.06
PDPN-208ENST00000509009 TLK2Q86UE8 772 aa14.66□□□□□ -0.06
PDPN-208ENST00000509009 FBXO16Q8IX29 292 aaPredicted RBP14.66□□□□□ -0.06
PDPN-208ENST00000509009 SLC43A3Q8NBI5 491 aa14.66□□□□□ -0.06
PDPN-208ENST00000509009 PNMA1Q8ND90 353 aa14.66□□□□□ -0.06
PDPN-208ENST00000509009 ZSCAN10Q96SZ4 725 aaPredicted RBP14.66□□□□□ -0.06
PDPN-208ENST00000509009 IL25Q9H293 177 aa14.66□□□□□ -0.06
PDPN-208ENST00000509009 CPVLQ9H3G5 476 aa14.66□□□□□ -0.06
PDPN-208ENST00000509009 MROH7Q68CQ1 1323 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms