RNA–Protein interactions for RNA: ENST00000508912.1

SSBP2-210, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 256 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-210ENST00000508912 BRD1O95696 1058 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 ASNSP08243 561 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 HOXB7P09629 217 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 ERCC3P19447 782 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 TGM1P22735 817 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 FECHP22830 423 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 PDE4DQ08499 809 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 RRP1BQ14684 758 aaKnown RBP6.54□□□□□ -1.36
SSBP2-210ENST00000508912 N4BP2L1Q5TBK1 243 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-210ENST00000508912 USP17L2Q6R6M4 530 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 CATSPERGQ6ZRH7 1159 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 TMCO2Q7Z6W1 182 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-210ENST00000508912 PTCD2Q8WV60 388 aaKnown RBP6.54□□□□□ -1.36
SSBP2-210ENST00000508912 SECISBP2LQ93073 1101 aaKnown RBP6.54□□□□□ -1.36
SSBP2-210ENST00000508912 C12orf42Q96LP6 360 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 KDM4CQ9H3R0 1056 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 MROH8Q9H579 483 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 IQSEC3Q9UPP2 1182 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-210ENST00000508912 USP15Q9Y4E8 981 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-210ENST00000508912 INSL6Q9Y581 213 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 SIP14410 1827 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 DOCK2Q92608 1830 aa6.54□□□□□ -1.36
SSBP2-210ENST00000508912 CDK5RAP2Q96SN8 1893 aa6.53□□□□□ -1.36
SSBP2-210ENST00000508912 GRIN2DO15399 1336 aa6.53□□□□□ -1.36
SSBP2-210ENST00000508912 LOC400499M0QZD8 3231 aa6.53□□□□□ -1.36
SSBP2-210ENST00000508912 FAM196BA6NMK8 535 aa6.53□□□□□ -1.36
SSBP2-210ENST00000508912 EIF4E1BA6NMX2 242 aaKnown RBP6.53□□□□□ -1.36
SSBP2-210ENST00000508912 KINO60870 393 aaKnown RBP6.53□□□□□ -1.36
SSBP2-210ENST00000508912 IQCF3P0C7M6 154 aa6.53□□□□□ -1.36
SSBP2-210ENST00000508912 RBM25P49756 843 aaKnown RBP6.53□□□□□ -1.36
SSBP2-210ENST00000508912 NDUFV1P49821 464 aa6.53□□□□□ -1.36
SSBP2-210ENST00000508912 DEFB103AP81534 67 aa6.53□□□□□ -1.36
SSBP2-210ENST00000508912 DIXDC1Q155Q3 683 aa6.53□□□□□ -1.36
SSBP2-210ENST00000508912 LARP1BQ659C4 914 aaKnown RBP6.53□□□□□ -1.36
SSBP2-210ENST00000508912 MSL3Q8N5Y2 521 aaKnown RBP6.53□□□□□ -1.36
SSBP2-210ENST00000508912 GLIS3Q8NEA6 775 aa6.53□□□□□ -1.36
SSBP2-210ENST00000508912 SP7Q8TDD2 431 aaPredicted RBP6.53□□□□□ -1.36
SSBP2-210ENST00000508912 SPATC1LQ9H0A9 340 aa6.53□□□□□ -1.36
SSBP2-210ENST00000508912 INCENPQ9NQS7 918 aa6.53□□□□□ -1.36
SSBP2-210ENST00000508912 GINM1Q9NU53 330 aa6.53□□□□□ -1.36
SSBP2-210ENST00000508912 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.53□□□□□ -1.36
SSBP2-210ENST00000508912 CLEC1BQ9P126 229 aa6.53□□□□□ -1.36
SSBP2-210ENST00000508912 CTAGE5O15320 804 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 LINC01565O15544 149 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 IGKV5-2P06315 115 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 SP9P0CG40 484 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 FCER1AP12319 257 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 NPR3P17342 541 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 IFIT5Q13325 482 aaKnown RBP6.52□□□□□ -1.37
SSBP2-210ENST00000508912 GCKRQ14397 625 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 ZNF792Q3KQV3 632 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 CAVIN4Q5BKX8 364 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 LDHAL6AQ6ZMR3 332 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 FLCNQ8NFG4 579 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 SUSD6Q92537 303 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 CDCA7LQ96GN5 454 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 LMAN2LQ9H0V9 348 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 ALDH8A1Q9H2A2 487 aaPredicted RBP6.52□□□□□ -1.37
SSBP2-210ENST00000508912 IGFLR1Q9H665 355 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 CDHR5Q9HBB8 845 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 DDX4Q9NQI0 724 aaKnown RBP6.52□□□□□ -1.37
SSBP2-210ENST00000508912 USP18Q9UMW8 372 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 NBEAQ8NFP9 2946 aa6.52□□□□□ -1.37
SSBP2-210ENST00000508912 COL11A1P12107 1806 aaPredicted RBP6.51□□□□□ -1.37
SSBP2-210ENST00000508912 MYH3P11055 1940 aa6.51□□□□□ -1.37
SSBP2-210ENST00000508912 ABHD14A-ACY1A0A1B0GW23 586 aa6.51□□□□□ -1.37
SSBP2-210ENST00000508912 EFCAB14O75071 495 aa6.51□□□□□ -1.37
SSBP2-210ENST00000508912 NEFMP07197 916 aa6.51□□□□□ -1.37
SSBP2-210ENST00000508912 GTF2F1P35269 517 aaKnown RBP eCLIP6.51□□□□□ -1.377e-7■■■■■ 41.5
SSBP2-210ENST00000508912 HTRA4P83105 476 aaPredicted RBP6.51□□□□□ -1.37
SSBP2-210ENST00000508912 C19orf57Q0VDD7 668 aa6.51□□□□□ -1.37
SSBP2-210ENST00000508912 KRT24Q2M2I5 525 aa6.51□□□□□ -1.37
SSBP2-210ENST00000508912 LRRFIP1Q32MZ4 808 aaKnown RBP6.51□□□□□ -1.37
SSBP2-210ENST00000508912 CXCL17Q6UXB2 119 aa6.51□□□□□ -1.37
SSBP2-210ENST00000508912 UBE3BQ7Z3V4 1068 aa6.51□□□□□ -1.37
SSBP2-210ENST00000508912 TMEM192Q8IY95 271 aa6.51□□□□□ -1.37
SSBP2-210ENST00000508912 RETREG2Q8NC44 543 aa6.51□□□□□ -1.37
SSBP2-210ENST00000508912 WDR66Q8TBY9 1149 aa6.51□□□□□ -1.37
SSBP2-210ENST00000508912 CFAP53Q96M91 514 aa6.51□□□□□ -1.37
SSBP2-210ENST00000508912 PHAXQ9H814 394 aaKnown RBP6.51□□□□□ -1.37
SSBP2-210ENST00000508912 HERC5Q9UII4 1024 aaKnown RBP6.51□□□□□ -1.37
SSBP2-210ENST00000508912 WDFY3Q8IZQ1 3526 aa6.5□□□□□ -1.37
SSBP2-210ENST00000508912 SPTLC1O15269 473 aa6.5□□□□□ -1.37
SSBP2-210ENST00000508912 DDX58O95786 925 aaKnown RBP6.5□□□□□ -1.37
SSBP2-210ENST00000508912 SNAI1O95863 264 aaPredicted RBP6.5□□□□□ -1.37
SSBP2-210ENST00000508912 ARP10275 920 aa6.5□□□□□ -1.37
SSBP2-210ENST00000508912 CYP2C9P11712 490 aa6.5□□□□□ -1.37
SSBP2-210ENST00000508912 PTGDRQ13258 359 aa6.5□□□□□ -1.37
SSBP2-210ENST00000508912 HIC1Q14526 733 aa6.5□□□□□ -1.37
SSBP2-210ENST00000508912 MAMDC4Q6UXC1 1216 aa6.5□□□□□ -1.37
SSBP2-210ENST00000508912 PDZD3Q86UT5 571 aa6.5□□□□□ -1.37
SSBP2-210ENST00000508912 FBXO11Q86XK2 927 aa6.5□□□□□ -1.37
SSBP2-210ENST00000508912 EFHBQ8N7U6 833 aa6.5□□□□□ -1.37
SSBP2-210ENST00000508912 RIN2Q8WYP3 895 aaPredicted RBP6.5□□□□□ -1.37
SSBP2-210ENST00000508912 HOXC10Q9NYD6 342 aa6.5□□□□□ -1.37
SSBP2-210ENST00000508912 PCDHGA4Q9Y5G9 962 aa6.5□□□□□ -1.37
SSBP2-210ENST00000508912 C5orf67F2Z3F1 127 aa6.49□□□□□ -1.37
SSBP2-210ENST00000508912 ARHGAP6O43182 974 aa6.49□□□□□ -1.37
SSBP2-210ENST00000508912 ADCY6O43306 1168 aa6.49□□□□□ -1.37
SSBP2-210ENST00000508912 MAP3K7O43318 606 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms