RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PRKAG3Q9UGI9 489 aa4.39□□□□□ -1.71
NEDD4-209ENST00000508871 VIMP08670 466 aaKnown RBP4.38□□□□□ -1.71
NEDD4-209ENST00000508871 PRKAR2AP13861 404 aaKnown RBP4.38□□□□□ -1.71
NEDD4-209ENST00000508871 RAB33AQ14088 237 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 TPD52L1Q16890 204 aaPredicted RBP4.38□□□□□ -1.71
NEDD4-209ENST00000508871 SLC30A9Q6PML9 568 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 FBXO33Q7Z6M2 555 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 ANKRD18AQ8IVF6 992 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 UNC45BQ8IWX7 931 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 CUL5Q93034 780 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 HLA-CQ95604 372 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 ERP27Q96DN0 273 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 SLC26A8Q96RN1 970 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 CEP126Q9P2H0 1117 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 ADGRG1Q9Y653 693 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 KIF16BQ96L93 1317 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 CRB1P82279 1406 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 CCDC66A2RUB6 948 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 CRCPO75575 148 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 ZNF853P0CG23 659 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 EPS15P42566 896 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 ZNF157P51786 506 aaPredicted RBP4.38□□□□□ -1.71
NEDD4-209ENST00000508871 GOLGA8DPQ0D2H9 430 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 ELOAQ14241 798 aaKnown RBP4.38□□□□□ -1.71
NEDD4-209ENST00000508871 GNPTABQ3T906 1256 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 LINC01559Q495D7 138 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 CTCFLQ8NI51 663 aaPredicted RBP4.38□□□□□ -1.71
NEDD4-209ENST00000508871 WDR48Q8TAF3 677 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 ARHGAP45Q92619 1136 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 KATNAL1Q9BW62 490 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 SEPSECSQ9HD40 501 aaKnown RBP4.38□□□□□ -1.71
NEDD4-209ENST00000508871 RNF19AQ9NV58 838 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 RTEL1Q9NZ71 1219 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 TRIM35Q9UPQ4 493 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 BOLA1Q9Y3E2 137 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 COL16A1Q07092 1604 aaPredicted RBP4.38□□□□□ -1.71
NEDD4-209ENST00000508871 PMM2O15305 246 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 PYGLP06737 847 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 ELF1P32519 619 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 ZNF165P49910 485 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 AK2P54819 239 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 SDR16C5Q8N3Y7 309 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 CCDC150Q8NCX0 1101 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 MAP7D2Q96T17 732 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 MIR1-1HGQ9H1L0 117 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 FAM8A1Q9UBU6 413 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 CORO2BQ9UQ03 480 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 FARP1Q9Y4F1 1045 aaPredicted RBP4.38□□□□□ -1.71
NEDD4-209ENST00000508871 RREB1Q92766 1687 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 RRN3P2A6NIE6 340 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 HSF2BPO75031 334 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 GFPT2O94808 682 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 MSL3P1P0C860 447 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 ARL3P36405 182 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 MECOMQ03112 1051 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 CUL4BQ13620 913 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 EFR3AQ14156 821 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 PPP4R3AQ6IN85 833 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 ZNF449Q6P9G9 518 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 PPP1R21Q6ZMI0 780 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 NCAPG2Q86XI2 1143 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.38□□□□□ -1.712e-6■■■□□ 17.5
NEDD4-209ENST00000508871 TNS4Q8IZW8 715 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 FAM174AQ8TBP5 190 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 RADILQ96JH8 1075 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 RBCK1Q9BYM8 510 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 DPH5Q9H2P9 285 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 XAB2Q9HCS7 855 aaKnown RBP4.38□□□□□ -1.71
NEDD4-209ENST00000508871 TYW1Q9NV66 732 aaKnown RBP4.38□□□□□ -1.71
NEDD4-209ENST00000508871 AP1M2Q9Y6Q5 423 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 C5P01031 1676 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 NUP188Q5SRE5 1749 aa4.38□□□□□ -1.71
NEDD4-209ENST00000508871 DAB2P98082 770 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 FAM180BQ6P0A1 224 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 NXPE4Q6UWF7 544 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 ZNF296Q8WUU4 475 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 CLMNQ96JQ2 1002 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 JAKMIP1Q96N16 626 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 PHOX2BQ99453 314 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 PLVAPQ9BX97 442 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 PLEKHA5Q9HAU0 1116 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 OLA1Q9NTK5 396 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 FANCIQ9NVI1 1328 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 TAF4O00268 1085 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 RLBP1P12271 317 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 ZAP70P43403 619 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 PLA2G4AP47712 749 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 EIF4A2Q14240 407 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 COL19A1Q14993 1142 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 UAP1L1Q3KQV9 507 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 ARHGEF25Q86VW2 580 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 THAP3Q8WTV1 239 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 IP6K1Q92551 441 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 DDX17Q92841 729 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 ZDHHC16Q969W1 377 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 UTP14AQ9BVJ6 771 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 RPS6KA6Q9UK32 745 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 TPCN1Q9ULQ1 816 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 MAP3K5Q99683 1374 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms