RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 GNASQ5JWF2 1037 aa15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 GPATCH4Q5T3I0 446 aaKnown RBP15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 SYDE2Q5VT97 1194 aa15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 IQSEC1Q6DN90 963 aa15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 CCSAPQ6IQ19 270 aaPredicted RBP15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 DGKHQ86XP1 1220 aa15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 BADQ92934 168 aa15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 INCENPQ9NQS7 918 aa15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 TMEM39AQ9NV64 488 aa15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 CYP39A1Q9NYL5 469 aa15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 STXBP5LQ9Y2K9 1186 aa15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 LAMA4Q16363 1823 aa15.98■□□□□ 0.15
CCHCR1-227ENST00000508852 A0A0U1RQG5 324 aaPredicted RBP15.98■□□□□ 0.15
CCHCR1-227ENST00000508852 TLR3O15455 904 aaKnown RBP15.98■□□□□ 0.15
CCHCR1-227ENST00000508852 PQBP1O60828 265 aaKnown RBP15.98■□□□□ 0.15
CCHCR1-227ENST00000508852 CNTN2Q02246 1040 aa15.98■□□□□ 0.15
CCHCR1-227ENST00000508852 NOL8Q76FK4 1167 aaKnown RBP15.98■□□□□ 0.15
CCHCR1-227ENST00000508852 ZNF589Q86UQ0 364 aaPredicted RBP15.98■□□□□ 0.15
CCHCR1-227ENST00000508852 VTI1AQ96AJ9 217 aa15.98■□□□□ 0.15
CCHCR1-227ENST00000508852 FGD4Q96M96 766 aa15.98■□□□□ 0.15
CCHCR1-227ENST00000508852 AP5M1Q9H0R1 490 aa15.98■□□□□ 0.15
CCHCR1-227ENST00000508852 VTA1Q9NP79 307 aa15.98■□□□□ 0.15
CCHCR1-227ENST00000508852 TRIM43BA6NCK2 446 aa15.97■□□□□ 0.15
CCHCR1-227ENST00000508852 ASGR1P07306 291 aa15.97■□□□□ 0.15
CCHCR1-227ENST00000508852 PDHBP11177 359 aa15.97■□□□□ 0.15
CCHCR1-227ENST00000508852 IMMTQ16891 758 aaKnown RBP15.97■□□□□ 0.15
CCHCR1-227ENST00000508852 TRIM43Q96BQ3 446 aaPredicted RBP15.97■□□□□ 0.15
CCHCR1-227ENST00000508852 DSCC1Q9BVC3 393 aa15.97■□□□□ 0.15
CCHCR1-227ENST00000508852 KATNBL1Q9H079 304 aa15.97■□□□□ 0.15
CCHCR1-227ENST00000508852 CNNM2Q9H8M5 875 aa15.97■□□□□ 0.15
CCHCR1-227ENST00000508852 MTMR10Q9NXD2 777 aa15.97■□□□□ 0.15
CCHCR1-227ENST00000508852 MTMR7Q9Y216 660 aa15.97■□□□□ 0.15
CCHCR1-227ENST00000508852 WDR19Q8NEZ3 1342 aa15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 SOWAHBA6NEL2 793 aa15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 ARVCFO00192 962 aa15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 IGHDP01880 384 aa15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 SNHG28P0DPA3 235 aa15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 HAND2P61296 217 aa15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 SMAD3P84022 425 aaKnown RBP15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 FPGSQ05932 587 aa15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 ZNF543Q08ER8 600 aa15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 ZNF697Q5TEC3 545 aa15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 CWC27Q6UX04 472 aaKnown RBP15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 NSMFQ6X4W1 530 aa15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 MORC4Q8TE76 937 aa15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 KRT23Q9C075 422 aa15.96■□□□□ 0.15
CCHCR1-227ENST00000508852 TIMP1P01033 207 aa15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 CDK7P50613 346 aa15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 FAAP100Q0VG06 881 aa15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 SHHQ15465 462 aa15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 BRDTQ58F21 947 aaPredicted RBP15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 SH3RF1Q7Z6J0 888 aa15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 TLK2Q86UE8 772 aa15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 SLC17A8Q8NDX2 589 aa15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 RGS22Q8NE09 1264 aa15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 DNERQ8NFT8 737 aa15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 EXOC6Q8TAG9 804 aa15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 LENG1Q96BZ8 264 aaPredicted RBP15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 KAT14Q9H8E8 782 aa15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 GPCPD1Q9NPB8 672 aa15.95■□□□□ 0.14
CCHCR1-227ENST00000508852 TMEM265A0A087WTH1 108 aa15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 PTPDC1A2A3K4 754 aa15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 SLC16A2P36021 539 aa15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 PPIGQ13427 754 aaKnown RBP eCLIP15.94■□□□□ 0.146e-7■■■□□ 18.9
CCHCR1-227ENST00000508852 FSCN1Q16658 493 aaKnown RBP15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 MUM1L1Q5H9M0 696 aa15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 TTBK2Q6IQ55 1244 aa15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 TMEM199Q8N511 208 aa15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 RUFY2Q8WXA3 655 aa15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 ANKS1AQ92625 1134 aa15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 CHMP4CQ96CF2 233 aa15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 GNEQ9Y223 722 aaKnown RBP15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 LRRC37A2A6NM11 1700 aa15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 FRMPD2Q68DX3 1309 aaPredicted RBP15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 RAD50Q92878 1312 aa15.94■□□□□ 0.14
CCHCR1-227ENST00000508852 NKRFO15226 690 aaKnown RBP eCLIP15.93■□□□□ 0.14
CCHCR1-227ENST00000508852 BAATQ14032 418 aaPredicted RBP15.93■□□□□ 0.14
CCHCR1-227ENST00000508852 ASPRV1Q53RT3 343 aa15.93■□□□□ 0.14
CCHCR1-227ENST00000508852 MFSD5Q6N075 450 aa15.93■□□□□ 0.14
CCHCR1-227ENST00000508852 RNF207Q6ZRF8 634 aa15.93■□□□□ 0.14
CCHCR1-227ENST00000508852 KIAA1211Q6ZU35 1233 aa15.93■□□□□ 0.14
CCHCR1-227ENST00000508852 TBC1D10CQ8IV04 446 aa15.93■□□□□ 0.14
CCHCR1-227ENST00000508852 RNPC3Q96LT9 517 aaKnown RBP15.93■□□□□ 0.14
CCHCR1-227ENST00000508852 MYADML2A6NDP7 307 aa15.92■□□□□ 0.14
CCHCR1-227ENST00000508852 ALDH5A1P51649 535 aaPredicted RBP15.92■□□□□ 0.14
CCHCR1-227ENST00000508852 SNAP25P60880 206 aa15.92■□□□□ 0.14
CCHCR1-227ENST00000508852 DUSP28Q4G0W2 176 aa15.92■□□□□ 0.14
CCHCR1-227ENST00000508852 TAPT1Q6NXT6 567 aa15.92■□□□□ 0.14
CCHCR1-227ENST00000508852 Q7L0L9 218 aa15.92■□□□□ 0.14
CCHCR1-227ENST00000508852 PNMA1Q8ND90 353 aa15.92■□□□□ 0.14
CCHCR1-227ENST00000508852 ZSCAN10Q96SZ4 725 aaPredicted RBP15.92■□□□□ 0.14
CCHCR1-227ENST00000508852 UBAC1Q9BSL1 405 aa15.92■□□□□ 0.14
CCHCR1-227ENST00000508852 POLR3EQ9NVU0 708 aa15.92■□□□□ 0.14
CCHCR1-227ENST00000508852 TBX21Q9UL17 535 aa15.92■□□□□ 0.14
CCHCR1-227ENST00000508852 CTAGE5O15320 804 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 DYNC1LI2O43237 492 aaPredicted RBP15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 ADCY6O43306 1168 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 KPNA6O60684 536 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 KDM4AO75164 1064 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 SMPD1P17405 629 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms